Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0826
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81066-6|CAN99668.1| 127|Caenorhabditis elegans Hypothetical pr... 35 0.044
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z81111-3|CAB03267.1| 334|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical pr... 27 8.8
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 27 8.8
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 27 8.8
>Z81066-6|CAN99668.1| 127|Caenorhabditis elegans Hypothetical
protein F17B5.8 protein.
Length = 127
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2
Query: 238 SSSNAPFAPASVPVARAIPCSSNVFSKIAPTNQLPCPRPYISSSTVDNFI 89
S+S F+ + RA P +SN+ SK A TN+ PR +++ + FI
Sbjct: 54 STSADKFSIGDIDFLRATPVNSNIVSKFAATNESSTPRIFVTEKNNNLFI 103
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -3
Query: 207 PSQSHVPFHALQMFSQK*LPQINFHVLVRIFHPRPLTILYKHSRSE 70
PS++ PF +L S+ P++N+ ++R F R +TI+YK SE
Sbjct: 1131 PSETSPPFSSLPPESEICTPKVNYMPVIRSFSNR-VTIVYKSINSE 1175
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -3
Query: 207 PSQSHVPFHALQMFSQK*LPQINFHVLVRIFHPRPLTILYKHSRSE 70
PS++ PF +L S+ P++N+ ++R F R +TI+YK SE
Sbjct: 1131 PSETSPPFSSLPPESEICTPKVNYMPVIRSFSNR-VTIVYKSINSE 1175
>Z81111-3|CAB03267.1| 334|Caenorhabditis elegans Hypothetical
protein T01G5.3 protein.
Length = 334
Score = 30.7 bits (66), Expect = 0.94
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -2
Query: 640 VSHKIIINQIIFSHSTKLLYKHSLQPAVI---ISIINSFTFRFYGVFLPPETDQHVDYLE 470
+ HK+ ++ S TK L K + ++ I +I FT F +LP V L+
Sbjct: 222 IVHKLQSTDLVMSDKTKYLQKQLMNALMVQATIPMIVCFTPCFLAWYLP------VFNLD 275
Query: 469 VGHWRPWTTAI 437
+G+W WT+ +
Sbjct: 276 IGNWIYWTSTV 286
>Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical
protein C17D12.5 protein.
Length = 139
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 367 TTRHMRFSFLLQAKYERISGLAAVLLLSMDASDQPLSNPRADQFPEVK 510
T ++M+F FL + +++ +G+ AVL+ + + PRA P ++
Sbjct: 72 TDKNMKFLFLEENQWKPSTGIVAVLIEACSVISRRDLVPRAPVLPRIR 119
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -2
Query: 262 VWGMGAICSSSNAPFAPASVPVARAIPCSSNV--FSKIAPTNQLPCPRPYISSSTVDNFI 89
++G+ A +S+ A VP R+ +V SK A ++P P P +S D+F+
Sbjct: 314 IFGISAPSTSAKAATKEKPVPKPRSEMVFHDVPSTSKDATPQRVPKPAPTAASKEEDDFV 373
Query: 88 *TFTK 74
F K
Sbjct: 374 NNFVK 378
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -2
Query: 262 VWGMGAICSSSNAPFAPASVPVARAIPCSSNV--FSKIAPTNQLPCPRPYISSSTVDNFI 89
++G+ A +S+ A VP R+ +V SK A ++P P P +S D+F+
Sbjct: 314 IFGISAPSTSAKAATKEKPVPKPRSEMVFHDVPSTSKDATPQRVPKPAPTAASKEEDDFV 373
Query: 88 *TFTK 74
F K
Sbjct: 374 NNFVK 378
>Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical protein
T24A11.1a protein.
Length = 938
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 235 SSNAPFAPASVPVARAIPCSSNVFSKIAPTNQLPCPRPYISSS 107
SS F P+S P + S N+ + ++PT P P SSS
Sbjct: 872 SSFDSFGPSSPPASSTSSSSLNMLASMSPTRPQPIPISCKSSS 914
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 339 STTRG*SAAHHATHEVFIPSSS 404
S++ SA HH TH+V +PS+S
Sbjct: 231 SSSSSASAEHHPTHQVRVPSAS 252
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -2
Query: 262 VWGMGAICSSSNAPFAPASVPVARAIPCSSNV--FSKIAPTNQLPCPRPYISSSTVDNFI 89
++G+ A +S+ A VP R+ +V SK A ++P P P +S D+F+
Sbjct: 314 IFGISAPSTSAKAATKEKPVPKPRSEMVFHDVPSTSKDATPQRVPKPAPTAASKEEDDFV 373
Query: 88 *TFTK 74
F K
Sbjct: 374 NNFVK 378
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,199,554
Number of Sequences: 27780
Number of extensions: 359621
Number of successful extensions: 844
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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