Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0825
         (762 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0754 + 24190778-24191284,24191735-24191784,24192311-241923...    29   4.0  
06_02_0032 + 10775031-10775520,10775661-10776246,10776333-107769...    29   4.0  
06_03_1162 + 28093749-28093851,28093939-28093997,28094691-280947...    28   9.3  
06_03_1104 + 27623632-27623795,27624052-27624175,27624316-276248...    28   9.3  

>06_03_0754 +
           24190778-24191284,24191735-24191784,24192311-24192383,
           24192577-24192717,24193635-24194039,24194215-24194319,
           24194635-24194775,24195330-24195533,24196206-24196292,
           24196689-24196800,24197972-24198015
          Length = 622

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
 Frame = -3

Query: 733 HTEELTKXDTDSNAGEHHTNVLHVNNQFSKTSLRVEVGRVLG-----AGRDDAVIDLLGG 569
           H+   T     +N G H+ N   +   FSKTS+  +   + G         D+VI +L  
Sbjct: 349 HSSSPTGTAVPNNQG-HYRNTTFLEG-FSKTSVVKQASDIKGHSIKVLNCHDSVIYILAP 406

Query: 568 AARAR-YGQT----VIGPVGRTVYTQHCKSVCMIS 479
              A  YG +    V+G VG+ V  +HC+ V +I+
Sbjct: 407 VKYATVYGCSDTTIVLGAVGKVVKVEHCERVQIIA 441


>06_02_0032 +
           10775031-10775520,10775661-10776246,10776333-10776973,
           10777270-10777973
          Length = 806

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 216 LLQVRSDRSHHCRIIVFIVAFFGCCGAVKENHCMIITFSVFLLII 350
           L+Q +    HH   +  I+  FG  GA     C  +T S++++ +
Sbjct: 455 LVQYKPILKHHILELAMIMDLFGLIGAYSAGSCRDVTTSIYVIAL 499


>06_03_1162 +
           28093749-28093851,28093939-28093997,28094691-28094766,
           28094848-28094919,28095023-28095110,28095230-28095485,
           28095583-28095698,28096064-28096127,28096252-28096354,
           28096446-28096554,28097048-28097234
          Length = 410

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 21  FYSVVIQFGGNI*LNNNGPRRWNVLCKVPHVLLQSPVCHYGIDH 152
           F+S+  Q+ G +     GP  W+ L K P  ++        +DH
Sbjct: 6   FWSIYYQYEGAVNEGQRGPTIWDTLTKRPGRVIDFSNADVAVDH 49


>06_03_1104 +
           27623632-27623795,27624052-27624175,27624316-27624832,
           27624943-27625073,27625161-27625567,27625690-27625963,
           27626195-27626814,27627424-27627859
          Length = 890

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = -2

Query: 485 DINSLLDVLVYRILSNGSVQVAHNRIFQVRMLHVTSDAHSQFSHEYDQEEY*KRYYH 315
           D N L D+ +  +LSNG    AH  I  VR   +   A S  S     +E+ + +YH
Sbjct: 614 DDNELADLEL--LLSNGESLKAHTAIISVRCPKLLPSAKSLGSDGKITDEWGRSFYH 668


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,502,252
Number of Sequences: 37544
Number of extensions: 440905
Number of successful extensions: 1173
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)