BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0824 (610 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 27 0.11 DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 5.4 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 27.5 bits (58), Expect = 0.11 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -2 Query: 546 TKKCADIPAMYPTNGFSMLVKTFYKF 469 T+ AD+P + P GF + V +YKF Sbjct: 224 TESKADLPLLCPAQGFPVPVHRWYKF 249 Score = 22.6 bits (46), Expect = 3.1 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 362 EPTSKKSPPCVLNH 321 EPTS+K PP L H Sbjct: 1224 EPTSQKVPPNQLTH 1237 >DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein protein. Length = 484 Score = 21.8 bits (44), Expect = 5.4 Identities = 7/30 (23%), Positives = 16/30 (53%) Frame = +3 Query: 348 FRGWFTVLFSRVRSFVMSPLTPLLKPQNLE 437 FR W +++ + +F+ PLL +++ Sbjct: 306 FRAWESIIVGMIGAFITCFTMPLLDKMHID 335 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 140,290 Number of Sequences: 438 Number of extensions: 2561 Number of successful extensions: 3 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17971191 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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