SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0823
         (776 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P50991 Cluster: T-complex protein 1 subunit delta; n=13...    62   2e-08
UniRef50_Q4PBE2 Cluster: T-complex protein 1, delta subunit; n=1...    60   8e-08
UniRef50_P48643 Cluster: T-complex protein 1 subunit epsilon; n=...    48   3e-04
UniRef50_A6S086 Cluster: Putative uncharacterized protein; n=1; ...    47   6e-04
UniRef50_A2Z9B2 Cluster: T-complex protein 1, delta subunit; n=1...    44   0.006
UniRef50_P50016 Cluster: Thermosome subunit; n=20; Archaea|Rep: ...    40   0.092
UniRef50_Q8SSH3 Cluster: T COMPLEX PROTEIN 1 DELTA SUBUNIT; n=1;...    38   0.28 
UniRef50_A7PW56 Cluster: Chromosome chr8 scaffold_34, whole geno...    38   0.37 
UniRef50_Q1VIJ2 Cluster: Thermosome subunit 1; n=1; Psychroflexu...    36   0.85 
UniRef50_O24734 Cluster: Thermosome subunit alpha; n=24; Thermop...    36   0.85 
UniRef50_Q1VNP5 Cluster: HSP60 family chaperonin; n=1; Psychrofl...    36   1.1  
UniRef50_O30560 Cluster: Thermosome subunit 2; n=8; Euryarchaeot...    36   1.1  
UniRef50_A2FL92 Cluster: TCP-1/cpn60 chaperonin family protein; ...    35   2.0  
UniRef50_Q9V2Q7 Cluster: Thermosome subunit; n=20; Euryarchaeota...    35   2.0  
UniRef50_Q4SS41 Cluster: Chromosome 11 SCAF14479, whole genome s...    35   2.6  
UniRef50_Q7R1S9 Cluster: GLP_190_44957_46648; n=2; Giardia intes...    35   2.6  
UniRef50_Q9V2S9 Cluster: Thermosome subunit alpha; n=34; Archaea...    35   2.6  
UniRef50_Q8THU8 Cluster: Hsp60; n=4; Archaea|Rep: Hsp60 - Methan...    34   4.6  
UniRef50_UPI0000498BB7 Cluster: T-complex protein 1 alpha subuni...    33   6.0  
UniRef50_Q7QR58 Cluster: GLP_301_27994_26207; n=3; Eukaryota|Rep...    33   6.0  
UniRef50_A0M6B5 Cluster: Membrane protein, UPF0093; n=8; Bactero...    33   8.0  
UniRef50_Q5CTZ7 Cluster: Putative T complex chaperonin; n=2; Cry...    33   8.0  
UniRef50_Q9HNI0 Cluster: Thermosome subunit beta; n=13; Euryarch...    33   8.0  
UniRef50_Q9HHA2 Cluster: Thermosome subunit 3; n=5; root|Rep: Th...    33   8.0  

>UniRef50_P50991 Cluster: T-complex protein 1 subunit delta; n=138;
           Eukaryota|Rep: T-complex protein 1 subunit delta - Homo
           sapiens (Human)
          Length = 539

 Score = 61.7 bits (143), Expect = 2e-08
 Identities = 31/76 (40%), Positives = 38/76 (50%)
 Frame = +1

Query: 4   VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183
           V+  A RS+HDALC +RC                                + YC+ A+AD
Sbjct: 397 VIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFAD 456

Query: 184 ALEVIPSTLAENAGLN 231
           A+EVIPSTLAENAGLN
Sbjct: 457 AMEVIPSTLAENAGLN 472



 Score = 50.8 bits (116), Expect = 4e-05
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +3

Query: 333 EHVLQPLHVTASALALATETVRAILKIDDIINT 431
           E V+QPL V+ SAL LATETVR+ILKIDD++NT
Sbjct: 506 ELVVQPLLVSVSALTLATETVRSILKIDDVVNT 538


>UniRef50_Q4PBE2 Cluster: T-complex protein 1, delta subunit; n=1;
           Ustilago maydis|Rep: T-complex protein 1, delta subunit
           - Ustilago maydis (Smut fungus)
          Length = 574

 Score = 59.7 bits (138), Expect = 8e-08
 Identities = 32/76 (42%), Positives = 37/76 (48%)
 Frame = +1

Query: 4   VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183
           V+  + RSLHDALC VRC                                + YC  AYA+
Sbjct: 432 VLEESERSLHDALCVVRCLVKKKALIAGGGAPEVHVSRLLSQYSQTLKGMEAYCFQAYAE 491

Query: 184 ALEVIPSTLAENAGLN 231
           ALEVIP+TLAENAGLN
Sbjct: 492 ALEVIPTTLAENAGLN 507



 Score = 41.5 bits (93), Expect = 0.023
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = +3

Query: 318 TDMRTEHVLQPLHVTASALALATETVRAILKIDD 419
           T++  E+VLQPL V  SA+ LATETV  +L+IDD
Sbjct: 536 TNILEENVLQPLLVNTSAIELATETVSLLLRIDD 569


>UniRef50_P48643 Cluster: T-complex protein 1 subunit epsilon;
           n=123; Eukaryota|Rep: T-complex protein 1 subunit
           epsilon - Homo sapiens (Human)
          Length = 541

 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 25/76 (32%), Positives = 34/76 (44%)
 Frame = +1

Query: 4   VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183
           ++  A RSLHDALC +R                                 + Y + A+AD
Sbjct: 394 IIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFAD 453

Query: 184 ALEVIPSTLAENAGLN 231
           ALEVIP  L+EN+G+N
Sbjct: 454 ALEVIPMALSENSGMN 469



 Score = 37.1 bits (82), Expect = 0.49
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +3

Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 422
           DM+ +HV++ L      ++LAT+ VR ILKIDDI
Sbjct: 500 DMKQQHVIETLIGKKQQISLATQMVRMILKIDDI 533


>UniRef50_A6S086 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 444

 Score = 46.8 bits (106), Expect = 6e-04
 Identities = 26/77 (33%), Positives = 34/77 (44%)
 Frame = +1

Query: 1   AVVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYA 180
           A++  A RSLHDALC VR                                 + Y + A+A
Sbjct: 294 AIIDEAKRSLHDALCVVRNLVRDNRVVYGGGAAEIACSLAVEDAAVKSPGLEQYAMRAFA 353

Query: 181 DALEVIPSTLAENAGLN 231
           DAL+ IP  LAEN+GL+
Sbjct: 354 DALDAIPMALAENSGLS 370


>UniRef50_A2Z9B2 Cluster: T-complex protein 1, delta subunit; n=1;
           Oryza sativa (indica cultivar-group)|Rep: T-complex
           protein 1, delta subunit - Oryza sativa subsp. indica
           (Rice)
          Length = 517

 Score = 43.6 bits (98), Expect = 0.006
 Identities = 21/36 (58%), Positives = 28/36 (77%)
 Frame = +3

Query: 318 TDMRTEHVLQPLHVTASALALATETVRAILKIDDII 425
           T++  E+V+QPL V+ SA+ LA E VR ILKIDDI+
Sbjct: 479 TNILEENVVQPLLVSTSAITLACECVRMILKIDDIV 514



 Score = 39.1 bits (87), Expect = 0.12
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = +1

Query: 154 DHYCLXAYADALEVIPSTLAENAGLN 231
           + YC+  +A+ALEVIP TL+ENAGL+
Sbjct: 425 ESYCVREFAEALEVIPYTLSENAGLD 450


>UniRef50_P50016 Cluster: Thermosome subunit; n=20; Archaea|Rep:
           Thermosome subunit - Methanopyrus kandleri
          Length = 545

 Score = 39.5 bits (88), Expect = 0.092
 Identities = 19/35 (54%), Positives = 23/35 (65%)
 Frame = +3

Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDII 425
           DM  E V++PL V   ALA ATE    IL+IDD+I
Sbjct: 490 DMLEEGVVEPLRVKTQALASATEAAEMILRIDDVI 524



 Score = 36.3 bits (80), Expect = 0.85
 Identities = 15/26 (57%), Positives = 21/26 (80%)
 Frame = +1

Query: 154 DHYCLXAYADALEVIPSTLAENAGLN 231
           +   + A+ADALE+IP TLAEN+GL+
Sbjct: 435 EQLAVEAFADALEIIPRTLAENSGLD 460


>UniRef50_Q8SSH3 Cluster: T COMPLEX PROTEIN 1 DELTA SUBUNIT; n=1;
           Encephalitozoon cuniculi|Rep: T COMPLEX PROTEIN 1 DELTA
           SUBUNIT - Encephalitozoon cuniculi
          Length = 484

 Score = 37.9 bits (84), Expect = 0.28
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = +3

Query: 324 MRTEHVLQPLHVTASALALATETVRAILKIDDII 425
           +R + V+QP  V+ S + LA ETV  ILKIDDI+
Sbjct: 447 VRDDSVVQPAKVSISVVTLALETVSMILKIDDIL 480


>UniRef50_A7PW56 Cluster: Chromosome chr8 scaffold_34, whole genome
           shotgun sequence; n=8; Eukaryota|Rep: Chromosome chr8
           scaffold_34, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 545

 Score = 37.5 bits (83), Expect = 0.37
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +1

Query: 154 DHYCLXAYADALEVIPSTLAENAGLN 231
           D Y +  +A++ E++P TLAENAGLN
Sbjct: 436 DQYAIAKFAESFEMVPKTLAENAGLN 461


>UniRef50_Q1VIJ2 Cluster: Thermosome subunit 1; n=1; Psychroflexus
           torquis ATCC 700755|Rep: Thermosome subunit 1 -
           Psychroflexus torquis ATCC 700755
          Length = 294

 Score = 36.3 bits (80), Expect = 0.85
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 154 DHYCLXAYADALEVIPSTLAENAGLN 231
           +   + A+ADALEVIP  LAENAGL+
Sbjct: 178 EQLAIEAFADALEVIPRALAENAGLD 203


>UniRef50_O24734 Cluster: Thermosome subunit alpha; n=24;
           Thermoprotei|Rep: Thermosome subunit alpha - Sulfolobus
           tokodaii
          Length = 559

 Score = 36.3 bits (80), Expect = 0.85
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +3

Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDII 425
           DM   +VL+P+ V A  L  A E   AILKIDD+I
Sbjct: 495 DMLALNVLEPVRVKAQVLKSAVEAATAILKIDDLI 529


>UniRef50_Q1VNP5 Cluster: HSP60 family chaperonin; n=1;
           Psychroflexus torquis ATCC 700755|Rep: HSP60 family
           chaperonin - Psychroflexus torquis ATCC 700755
          Length = 131

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +1

Query: 166 LXAYADALEVIPSTLAENAG 225
           + A+ADALEVIP+T+AENAG
Sbjct: 41  INAFADALEVIPATIAENAG 60



 Score = 35.9 bits (79), Expect = 1.1
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = +3

Query: 318 TDMRTEHVLQPLHVTASALALATETVRAILKIDDII 425
           T M+   V++PL +   A+  ATE   AILKIDDII
Sbjct: 91  TSMQDLGVVEPLDLVKQAILSATEVTSAILKIDDII 126


>UniRef50_O30560 Cluster: Thermosome subunit 2; n=8;
           Euryarchaeota|Rep: Thermosome subunit 2 - Halobacterium
           volcanii (Haloferax volcanii)
          Length = 557

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = +1

Query: 154 DHYCLXAYADALEVIPSTLAENAGLN 231
           +   + AYADALE++P  LAENAGL+
Sbjct: 434 EQLAVEAYADALELVPRVLAENAGLD 459


>UniRef50_A2FL92 Cluster: TCP-1/cpn60 chaperonin family protein;
           n=3; Trichomonas vaginalis G3|Rep: TCP-1/cpn60
           chaperonin family protein - Trichomonas vaginalis G3
          Length = 537

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = +1

Query: 154 DHYCLXAYADALEVIPSTLAENAGL 228
           D Y +  +A+ALEVIP T+AEN+G+
Sbjct: 429 DQYGIRKFAEALEVIPRTIAENSGI 453


>UniRef50_Q9V2Q7 Cluster: Thermosome subunit; n=20;
           Euryarchaeota|Rep: Thermosome subunit - Pyrococcus
           abyssi
          Length = 550

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 15/26 (57%), Positives = 21/26 (80%)
 Frame = +1

Query: 154 DHYCLXAYADALEVIPSTLAENAGLN 231
           +   + A+A+AL+VIP TLAENAGL+
Sbjct: 433 EQLAIEAFAEALKVIPRTLAENAGLD 458


>UniRef50_Q4SS41 Cluster: Chromosome 11 SCAF14479, whole genome
           shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 11
           SCAF14479, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 708

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -1

Query: 485 INTLLKYISSSSPFWLIHCIYNVINFEYS-THSFGCECERGSCNMKRLQHMLRAHICNSS 309
           ++ L + +S S  FW I CI+ +I    + TH+ G   E G   + +L   L A I +++
Sbjct: 189 VSALKEILSESLSFWCISCIHMMIEIIVTLTHNCGVGVESGGVKLYKLGQRLLAKITDTA 248

Query: 308 AAYVD 294
               D
Sbjct: 249 GLKAD 253


>UniRef50_Q7R1S9 Cluster: GLP_190_44957_46648; n=2; Giardia
           intestinalis|Rep: GLP_190_44957_46648 - Giardia lamblia
           ATCC 50803
          Length = 563

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +1

Query: 160 YCLXAYADALEVIPSTLAENAGL 228
           Y + AYA+ALEV+P  LAE AGL
Sbjct: 452 YSMHAYAEALEVVPRLLAETAGL 474


>UniRef50_Q9V2S9 Cluster: Thermosome subunit alpha; n=34;
           Archaea|Rep: Thermosome subunit alpha - Sulfolobus
           solfataricus
          Length = 559

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +3

Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDII 425
           D+   ++++P+ V +  L  ATE   AILKIDD+I
Sbjct: 494 DVYALNIIEPIRVKSQVLKSATEAATAILKIDDLI 528


>UniRef50_Q8THU8 Cluster: Hsp60; n=4; Archaea|Rep: Hsp60 -
           Methanosarcina acetivorans
          Length = 543

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDII 425
           DM   +V++PL +   A+  ATE    IL+IDD+I
Sbjct: 486 DMFENNVVEPLRIKTQAINAATEAAIMILRIDDVI 520



 Score = 33.5 bits (73), Expect = 6.0
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 175 YADALEVIPSTLAENAGLN 231
           +A++LEVIP TLAENAGL+
Sbjct: 438 FAESLEVIPQTLAENAGLD 456


>UniRef50_UPI0000498BB7 Cluster: T-complex protein 1 alpha subunit;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: T-complex
           protein 1 alpha subunit - Entamoeba histolytica
           HM-1:IMSS
          Length = 544

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 21/68 (30%), Positives = 27/68 (39%)
 Frame = +1

Query: 19  ARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYADALEVI 198
           +RSLHDALC +R                                 +   + A+ADAL VI
Sbjct: 391 SRSLHDALCVLRRVLESNTVIVGGGATDVALSVHLNEYATTLEGREQLAVQAFADALCVI 450

Query: 199 PSTLAENA 222
           P  LA+NA
Sbjct: 451 PKVLAQNA 458


>UniRef50_Q7QR58 Cluster: GLP_301_27994_26207; n=3; Eukaryota|Rep:
           GLP_301_27994_26207 - Giardia lamblia ATCC 50803
          Length = 595

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 21/75 (28%), Positives = 28/75 (37%)
 Frame = +1

Query: 7   VAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYADA 186
           +  + RSLHDA+C VR                                 +     A A A
Sbjct: 405 IQESERSLHDAICVVRRAIRHPRFIAGGGSIEMYLSAMLYRHAKTISGKNQLIFEAIAKA 464

Query: 187 LEVIPSTLAENAGLN 231
           LE+IP +L ENAG +
Sbjct: 465 LEIIPYSLCENAGFD 479


>UniRef50_A0M6B5 Cluster: Membrane protein, UPF0093; n=8;
           Bacteroidetes|Rep: Membrane protein, UPF0093 - Gramella
           forsetii (strain KT0803)
          Length = 182

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 15/61 (24%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = -3

Query: 636 MRRQYWLITSYLAEYLRNIFSCFIL-LVADWCVTSYLNIKLS*KIMLWISKD*YFVKIHF 460
           M ++ W I ++ +  L +IF+  +L ++ +W   S++++KL   ++L+     Y +K H 
Sbjct: 53  MTKRLWFIITWPSAILASIFAIMLLFMIPEWLQQSWMHVKLGFVVLLYA----YHIKCHM 108

Query: 459 L 457
           +
Sbjct: 109 I 109


>UniRef50_Q5CTZ7 Cluster: Putative T complex chaperonin; n=2;
           Cryptosporidium|Rep: Putative T complex chaperonin -
           Cryptosporidium parvum Iowa II
          Length = 564

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 154 DHYCLXAYADALEVIPSTLAENAGLN 231
           + Y +  +A+AL+V P  LAEN+GLN
Sbjct: 446 EEYAVNMFAEALDVFPRLLAENSGLN 471


>UniRef50_Q9HNI0 Cluster: Thermosome subunit beta; n=13;
           Euryarchaeota|Rep: Thermosome subunit beta -
           Halobacterium salinarium (Halobacterium halobium)
          Length = 556

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = +1

Query: 154 DHYCLXAYADALEVIPSTLAENAGLN 231
           +   + A+AD+LE++P  LAENAGL+
Sbjct: 435 EQLAVEAFADSLELVPRVLAENAGLD 460


>UniRef50_Q9HHA2 Cluster: Thermosome subunit 3; n=5; root|Rep:
           Thermosome subunit 3 - Halobacterium volcanii (Haloferax
           volcanii)
          Length = 524

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +1

Query: 172 AYADALEVIPSTLAENAGLN 231
           AYADA+E +P TLAEN G++
Sbjct: 437 AYADAVEALPRTLAENTGMD 456


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,887,070
Number of Sequences: 1657284
Number of extensions: 10489157
Number of successful extensions: 24439
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 23687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24416
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -