BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0823 (776 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_08_0620 - 19321612-19323237 53 2e-07 02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 44 2e-04 06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 40 0.002 03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 35 0.063 05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 33 0.19 03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 33 0.33 05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 32 0.58 06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 31 1.3 02_03_0356 + 18073794-18074052,18074054-18074163 30 2.4 03_04_0098 - 17275045-17275665 28 7.2 02_01_0565 + 4141592-4141879 28 7.2 >10_08_0620 - 19321612-19323237 Length = 541 Score = 53.2 bits (122), Expect = 2e-07 Identities = 28/76 (36%), Positives = 35/76 (46%) Frame = +1 Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183 V+ A RSLHDA C +RC + YC+ +A+ Sbjct: 399 VIDEAQRSLHDAFCVIRCLVNKRFLIAGGGAPEIEMSMQLAAWAKELRGMESYCVREFAE 458 Query: 184 ALEVIPSTLAENAGLN 231 ALEVIP TLAENAGL+ Sbjct: 459 ALEVIPYTLAENAGLD 474 Score = 43.2 bits (97), Expect = 2e-04 Identities = 21/36 (58%), Positives = 28/36 (77%) Frame = +3 Query: 318 TDMRTEHVLQPLHVTASALALATETVRAILKIDDII 425 T++ E+V+QPL V+ SA+ LA E VR ILKIDDI+ Sbjct: 503 TNILEENVVQPLLVSTSAVTLACECVRMILKIDDIV 538 >02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 Length = 550 Score = 43.6 bits (98), Expect = 2e-04 Identities = 21/36 (58%), Positives = 28/36 (77%) Frame = +3 Query: 318 TDMRTEHVLQPLHVTASALALATETVRAILKIDDII 425 T++ E+V+QPL V+ SA+ LA E VR ILKIDDI+ Sbjct: 512 TNILEENVVQPLLVSTSAITLACECVRMILKIDDIV 547 Score = 42.7 bits (96), Expect = 3e-04 Identities = 18/26 (69%), Positives = 22/26 (84%) Frame = +1 Query: 154 DHYCLXAYADALEVIPSTLAENAGLN 231 + YC+ +A+ALEVIP TLAENAGLN Sbjct: 458 ESYCIKEFAEALEVIPYTLAENAGLN 483 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +1 Query: 4 VVAXAARSLHDALCAVR 54 V+ A RSLHDALC +R Sbjct: 392 VIDEAERSLHDALCVIR 408 >06_03_0477 - 21250811-21250981,21251261-21251374,21251447-21251613, 21252051-21252153,21252315-21252367,21252438-21252570, 21252835-21253183,21253685-21254003,21254519-21254717 Length = 535 Score = 39.9 bits (89), Expect = 0.002 Identities = 22/76 (28%), Positives = 31/76 (40%) Frame = +1 Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183 ++ RSLHDALC R + Y + ++AD Sbjct: 390 MIEETKRSLHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADRYPGVEQYAIRSFAD 449 Query: 184 ALEVIPSTLAENAGLN 231 AL+ IP LAEN+GL+ Sbjct: 450 ALDAIPLALAENSGLS 465 Score = 31.1 bits (67), Expect = 1.0 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = +3 Query: 324 MRTEHVLQPLHVTASALALATETVRAILKIDDIIN 428 M+ ++V + L + LAT+ V+ ILKIDD+I+ Sbjct: 497 MKEQNVFETLIGKQQQILLATQVVKMILKIDDVIS 531 >03_06_0362 + 33379489-33379624,33380161-33380423,33380524-33380670, 33380753-33380914,33381681-33381758,33382329-33382462, 33382702-33382774,33382852-33382929,33383002-33383124, 33383223-33383317,33383723-33383932,33384115-33384172, 33384268-33384333 Length = 540 Score = 35.1 bits (77), Expect = 0.063 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = +1 Query: 154 DHYCLXAYADALEVIPSTLAENAGLN 231 D Y + +A++ E++P TLAENAGL+ Sbjct: 432 DQYAIAKFAESFEMVPRTLAENAGLS 457 >05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102, 2659187-2659255,2659561-2659655,2659740-2659944, 2660125-2660211,2660291-2660405,2660696-2660802, 2661054-2661146,2661243-2661290,2661345-2661544, 2661993-2662128,2662228-2662291,2662779-2662912 Length = 551 Score = 33.5 bits (73), Expect = 0.19 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +1 Query: 172 AYADALEVIPSTLAENAGLN 231 A+ADAL VIP TLAEN+GL+ Sbjct: 459 AFADALLVIPKTLAENSGLD 478 >03_05_0339 + 23287620-23287676,23287784-23287849,23287937-23288048, 23288240-23288368,23288795-23288866,23289245-23289360, 23289494-23289570,23289788-23290273,23290373-23290688, 23290769-23290915 Length = 525 Score = 32.7 bits (71), Expect = 0.33 Identities = 20/76 (26%), Positives = 31/76 (40%) Frame = +1 Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183 V+ A RSLHDALC + + + A++ Sbjct: 375 VLDEAERSLHDALCVLSQTVNDTRVLFGGGWPEMVMAKAVDDLARKTPGKKSHAIDAFSR 434 Query: 184 ALEVIPSTLAENAGLN 231 AL+ IP+ +A+NAGL+ Sbjct: 435 ALQAIPTIIADNAGLD 450 >05_07_0067 + 27463703-27463705,27464309-27464365,27464779-27464844, 27464985-27465096,27465281-27465409,27466076-27466191, 27466364-27466440,27466678-27467163,27467255-27467570, 27467618-27467797 Length = 513 Score = 31.9 bits (69), Expect = 0.58 Identities = 20/76 (26%), Positives = 31/76 (40%) Frame = +1 Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183 V+ A RSLHDALC + + + A++ Sbjct: 352 VLDEAERSLHDALCVLSQTVNDTRVLYGGGWPEMVMAKEVDGLARKTPGKKSHAIEAFSR 411 Query: 184 ALEVIPSTLAENAGLN 231 AL+ IP+ +A+NAGL+ Sbjct: 412 ALQSIPTIIADNAGLD 427 >06_03_1193 - 28298656-28298754,28299303-28299377,28299456-28299544, 28299679-28299760,28300385-28300474,28300557-28300655, 28300733-28300852,28300968-28301084,28301174-28301309, 28301415-28301584,28301744-28301947,28302032-28302157, 28302841-28303101,28303215-28303229 Length = 560 Score = 30.7 bits (66), Expect = 1.3 Identities = 20/75 (26%), Positives = 28/75 (37%) Frame = +1 Query: 7 VAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYADA 186 + A RSLHDA+ VR + + ++A A Sbjct: 385 IEEAERSLHDAIMIVRRALKNSTVVPGGGAIDMEISKYLRQHARTIAGKSQFFVNSFAKA 444 Query: 187 LEVIPSTLAENAGLN 231 LEVIP L +NAG + Sbjct: 445 LEVIPRQLCDNAGFD 459 >02_03_0356 + 18073794-18074052,18074054-18074163 Length = 122 Score = 29.9 bits (64), Expect = 2.4 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +1 Query: 598 SKIRCDQPILATHKRPAG-CSLSKSTYLSHSKGINPS 705 SK+ D ILAT + A CS SK T LS S G++PS Sbjct: 36 SKLCPDASILATLRSLASACSKSKLTGLSPSAGVSPS 72 >03_04_0098 - 17275045-17275665 Length = 206 Score = 28.3 bits (60), Expect = 7.2 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +1 Query: 652 CSLSKSTYLSHSKGINPSYSSTEW 723 C+LS+ L HS+ P YSS W Sbjct: 60 CTLSRHRNLGHSRAGAPGYSSRRW 83 >02_01_0565 + 4141592-4141879 Length = 95 Score = 28.3 bits (60), Expect = 7.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 470 KYISSSSPFWLIHCIYNVINFEY 402 KYI +SSP L H IY ++ F Y Sbjct: 45 KYIETSSPEPLFHVIYGLMAFSY 67 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,458,646 Number of Sequences: 37544 Number of extensions: 293437 Number of successful extensions: 669 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 637 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 666 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2080154268 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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