Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0823
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 54 2e-07
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 54 2e-07
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 43 3e-04
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 31 0.70
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 31 1.2
Z83239-4|CAB05808.1| 336|Caenorhabditis elegans Hypothetical pr... 29 3.7
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 28 6.5
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/76 (38%), Positives = 35/76 (46%)
Frame = +1
Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183
V+ A RS+HDALC +RC YC A+AD
Sbjct: 397 VLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFAD 456
Query: 184 ALEVIPSTLAENAGLN 231
ALE+IP TLAENAGL+
Sbjct: 457 ALELIPYTLAENAGLS 472
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +3
Query: 318 TDMRTEHVLQPLHVTASALALATETVRAILKIDDII 425
TDM E V+QPL VTASA+ A+E VR+ILKIDDI+
Sbjct: 501 TDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIV 536
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/76 (38%), Positives = 35/76 (46%)
Frame = +1
Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183
V+ A RS+HDALC +RC YC A+AD
Sbjct: 397 VLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFAD 456
Query: 184 ALEVIPSTLAENAGLN 231
ALE+IP TLAENAGL+
Sbjct: 457 ALELIPYTLAENAGLS 472
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +3
Query: 318 TDMRTEHVLQPLHVTASALALATETVRAILKIDDII 425
TDM E V+QPL VTASA+ A+E VR+ILKIDDI+
Sbjct: 501 TDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIV 536
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/75 (32%), Positives = 31/75 (41%)
Frame = +1
Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183
++ A R+LHDALC +R + Y A+AD
Sbjct: 393 IIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFAD 452
Query: 184 ALEVIPSTLAENAGL 228
ALE IP LAEN+GL
Sbjct: 453 ALESIPMALAENSGL 467
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 422
DM+ + V++ L ++LAT+ VR ILKIDD+
Sbjct: 499 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/75 (32%), Positives = 31/75 (41%)
Frame = +1
Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183
++ A R+LHDALC +R + Y A+AD
Sbjct: 393 IIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFAD 452
Query: 184 ALEVIPSTLAENAGL 228
ALE IP LAEN+GL
Sbjct: 453 ALESIPMALAENSGL 467
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 422
DM+ + V++ L ++LAT+ VR ILKIDD+
Sbjct: 499 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/75 (32%), Positives = 31/75 (41%)
Frame = +1
Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183
++ A R+LHDALC +R + Y A+AD
Sbjct: 187 IIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFAD 246
Query: 184 ALEVIPSTLAENAGL 228
ALE IP LAEN+GL
Sbjct: 247 ALESIPMALAENSGL 261
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 422
DM+ + V++ L ++LAT+ VR ILKIDD+
Sbjct: 293 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 326
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/75 (32%), Positives = 31/75 (41%)
Frame = +1
Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183
++ A R+LHDALC +R + Y A+AD
Sbjct: 393 IIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFAD 452
Query: 184 ALEVIPSTLAENAGL 228
ALE IP LAEN+GL
Sbjct: 453 ALESIPMALAENSGL 467
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 422
DM+ + V++ L ++LAT+ VR ILKIDD+
Sbjct: 499 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 31.5 bits (68), Expect = 0.70
Identities = 21/75 (28%), Positives = 26/75 (34%)
Frame = +1
Query: 7 VAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYADA 186
+A RSLHDA+ VR D AY A
Sbjct: 380 IAETERSLHDAIMIVRRAKKNDSIVAGGGAIEMELSRLIREHSKGIEGKDQAFWMAYGQA 439
Query: 187 LEVIPSTLAENAGLN 231
E+IP L +NAGL+
Sbjct: 440 FEIIPRQLCQNAGLD 454
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 154 DHYCLXAYADALEVIPSTLAENAGL 228
+ Y + +A ALE +P +AENAG+
Sbjct: 467 EQYAIKKFAHALETLPKAIAENAGM 491
>Z83239-4|CAB05808.1| 336|Caenorhabditis elegans Hypothetical
protein T09F5.8 protein.
Length = 336
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = -1
Query: 455 SSPFWLIHCIYNVINFEYSTHSFGCEC--ERGSCNMKRLQH-MLRAHICNS 312
+ P++ C+Y + F + H FG C R S MK ++ M H NS
Sbjct: 7 NEPYYFSLCLYTIGMFSFPIHLFGAYCILFRTSIAMKHVKWVMFNLHFWNS 57
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDIIN 428
DM + PL V L A ET +L+IDDI++
Sbjct: 492 DMNKLEIWDPLAVRIQVLKTAIETSVMLLRIDDIVS 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,007,400
Number of Sequences: 27780
Number of extensions: 261918
Number of successful extensions: 779
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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