BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0823 (776 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 54 2e-07 U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 54 2e-07 Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 43 3e-04 Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 43 3e-04 Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 43 3e-04 U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 43 3e-04 AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 31 0.70 AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 31 1.2 Z83239-4|CAB05808.1| 336|Caenorhabditis elegans Hypothetical pr... 29 3.7 AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 28 6.5 >Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical protein K01C8.10 protein. Length = 540 Score = 53.6 bits (123), Expect = 2e-07 Identities = 29/76 (38%), Positives = 35/76 (46%) Frame = +1 Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183 V+ A RS+HDALC +RC YC A+AD Sbjct: 397 VLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFAD 456 Query: 184 ALEVIPSTLAENAGLN 231 ALE+IP TLAENAGL+ Sbjct: 457 ALELIPYTLAENAGLS 472 Score = 48.0 bits (109), Expect = 7e-06 Identities = 24/36 (66%), Positives = 29/36 (80%) Frame = +3 Query: 318 TDMRTEHVLQPLHVTASALALATETVRAILKIDDII 425 TDM E V+QPL VTASA+ A+E VR+ILKIDDI+ Sbjct: 501 TDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIV 536 >U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. Length = 540 Score = 53.6 bits (123), Expect = 2e-07 Identities = 29/76 (38%), Positives = 35/76 (46%) Frame = +1 Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183 V+ A RS+HDALC +RC YC A+AD Sbjct: 397 VLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFAD 456 Query: 184 ALEVIPSTLAENAGLN 231 ALE+IP TLAENAGL+ Sbjct: 457 ALELIPYTLAENAGLS 472 Score = 48.0 bits (109), Expect = 7e-06 Identities = 24/36 (66%), Positives = 29/36 (80%) Frame = +3 Query: 318 TDMRTEHVLQPLHVTASALALATETVRAILKIDDII 425 TDM E V+QPL VTASA+ A+E VR+ILKIDDI+ Sbjct: 501 TDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIV 536 >Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical protein C07G2.3a protein. Length = 542 Score = 42.7 bits (96), Expect = 3e-04 Identities = 24/75 (32%), Positives = 31/75 (41%) Frame = +1 Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183 ++ A R+LHDALC +R + Y A+AD Sbjct: 393 IIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFAD 452 Query: 184 ALEVIPSTLAENAGL 228 ALE IP LAEN+GL Sbjct: 453 ALESIPMALAENSGL 467 Score = 33.9 bits (74), Expect = 0.13 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +3 Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 422 DM+ + V++ L ++LAT+ VR ILKIDD+ Sbjct: 499 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532 >Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical protein C07G2.3a protein. Length = 542 Score = 42.7 bits (96), Expect = 3e-04 Identities = 24/75 (32%), Positives = 31/75 (41%) Frame = +1 Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183 ++ A R+LHDALC +R + Y A+AD Sbjct: 393 IIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFAD 452 Query: 184 ALEVIPSTLAENAGL 228 ALE IP LAEN+GL Sbjct: 453 ALESIPMALAENSGL 467 Score = 33.9 bits (74), Expect = 0.13 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +3 Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 422 DM+ + V++ L ++LAT+ VR ILKIDD+ Sbjct: 499 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532 >Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical protein C07G2.3b protein. Length = 336 Score = 42.7 bits (96), Expect = 3e-04 Identities = 24/75 (32%), Positives = 31/75 (41%) Frame = +1 Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183 ++ A R+LHDALC +R + Y A+AD Sbjct: 187 IIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFAD 246 Query: 184 ALEVIPSTLAENAGL 228 ALE IP LAEN+GL Sbjct: 247 ALESIPMALAENSGL 261 Score = 33.9 bits (74), Expect = 0.13 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +3 Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 422 DM+ + V++ L ++LAT+ VR ILKIDD+ Sbjct: 293 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 326 >U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. Length = 542 Score = 42.7 bits (96), Expect = 3e-04 Identities = 24/75 (32%), Positives = 31/75 (41%) Frame = +1 Query: 4 VVAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYAD 183 ++ A R+LHDALC +R + Y A+AD Sbjct: 393 IIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFAD 452 Query: 184 ALEVIPSTLAENAGL 228 ALE IP LAEN+GL Sbjct: 453 ALESIPMALAENSGL 467 Score = 33.9 bits (74), Expect = 0.13 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +3 Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 422 DM+ + V++ L ++LAT+ VR ILKIDD+ Sbjct: 499 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532 >AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical protein T10B5.5a protein. Length = 535 Score = 31.5 bits (68), Expect = 0.70 Identities = 21/75 (28%), Positives = 26/75 (34%) Frame = +1 Query: 7 VAXAARSLHDALCAVRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLXAYADA 186 +A RSLHDA+ VR D AY A Sbjct: 380 IAETERSLHDAIMIVRRAKKNDSIVAGGGAIEMELSRLIREHSKGIEGKDQAFWMAYGQA 439 Query: 187 LEVIPSTLAENAGLN 231 E+IP L +NAGL+ Sbjct: 440 FEIIPRQLCQNAGLD 454 >AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical protein Y55F3AR.3 protein. Length = 581 Score = 30.7 bits (66), Expect = 1.2 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +1 Query: 154 DHYCLXAYADALEVIPSTLAENAGL 228 + Y + +A ALE +P +AENAG+ Sbjct: 467 EQYAIKKFAHALETLPKAIAENAGM 491 >Z83239-4|CAB05808.1| 336|Caenorhabditis elegans Hypothetical protein T09F5.8 protein. Length = 336 Score = 29.1 bits (62), Expect = 3.7 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Frame = -1 Query: 455 SSPFWLIHCIYNVINFEYSTHSFGCEC--ERGSCNMKRLQH-MLRAHICNS 312 + P++ C+Y + F + H FG C R S MK ++ M H NS Sbjct: 7 NEPYYFSLCLYTIGMFSFPIHLFGAYCILFRTSIAMKHVKWVMFNLHFWNS 57 >AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical protein F54A3.3 protein. Length = 543 Score = 28.3 bits (60), Expect = 6.5 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 321 DMRTEHVLQPLHVTASALALATETVRAILKIDDIIN 428 DM + PL V L A ET +L+IDDI++ Sbjct: 492 DMNKLEIWDPLAVRIQVLKTAIETSVMLLRIDDIVS 527 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,007,400 Number of Sequences: 27780 Number of extensions: 261918 Number of successful extensions: 779 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 729 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 770 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1872168044 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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