Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0822
(556 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 36 2e-04
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 23 2.7
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 8.4
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 21 8.4
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 21 8.4
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 8.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.4
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 36.3 bits (80), Expect = 2e-04
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 2 YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 115
+D++ D WSLG ++ E+ TG P F+G + + N I++
Sbjct: 542 HDISADYWSLGVLMFELLTGTPPFTGGDPMKTYNIILK 579
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 22.6 bits (46), Expect = 2.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 370 DLILRMLEYDPKXRVTPYYALQH 438
+LI +ML +P R+T AL+H
Sbjct: 145 NLINQMLTVNPSKRITASEALKH 167
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.0 bits (42), Expect = 8.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 2 YDLAIDMWSLGCIL 43
Y A+D+W GC++
Sbjct: 258 YVKALDVWMAGCMM 271
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 21.0 bits (42), Expect = 8.4
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = -3
Query: 416 VTRCFGSYSSMRSI 375
+ +CFG Y +M+ +
Sbjct: 119 LVKCFGKYKTMKEV 132
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 21.0 bits (42), Expect = 8.4
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = -3
Query: 416 VTRCFGSYSSMRSI 375
+ +CFG Y +M+ +
Sbjct: 119 LVKCFGKYKTMKEV 132
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 13 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 13 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 13 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 13 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 13 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 13 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 13 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 52
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 262 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 301
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 262 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 301
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 262 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 301
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 262 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 301
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 262 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 301
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 262 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 301
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 4 RSRDRHVVARLYIGRDAHXRATLQRGQRSRSDEQDRRGSRN 126
+ +DR +L+ + H R R + SRS E++++ +N
Sbjct: 262 KKKDRRY-DQLHNVEEKHLRERTSRRRYSRSREREQKSYKN 301
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,438
Number of Sequences: 438
Number of extensions: 1487
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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