Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0821
         (740 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2870|AAG22438.1|  494|Drosophila melanogaster CG5559-PA...    31   2.2  
BT025941-1|ABG02185.1|  207|Drosophila melanogaster IP14143p pro...    29   8.8  
BT025938-1|ABG02182.1|  207|Drosophila melanogaster IP14043p pro...    29   8.8  
AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p pro...    29   8.8  
AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA ...    29   8.8  
AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-P...    29   8.8  
AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA...    29   8.8  

>AE014134-2870|AAG22438.1|  494|Drosophila melanogaster CG5559-PA
           protein.
          Length = 494

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
 Frame = +1

Query: 274 GAIESFVLDNTQQNTRQDYSFYERSNVIASS--------KFATPKRVETIASINKRDINT 429
           GA+  + +DN  +  R  YS     N+  +S         F  P  V + A+I ++  NT
Sbjct: 69  GAV-GYNVDNVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNT 127

Query: 430 TALPASPTRSIDSLSQRSLSY 492
           T   A PT    SL   +LSY
Sbjct: 128 TEESAPPTSPTGSLKSNTLSY 148


>BT025941-1|ABG02185.1|  207|Drosophila melanogaster IP14143p
           protein.
          Length = 207

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
 Frame = +3

Query: 516 PGNPGAQYPPPVYENVDYYGE-QRSXXXXXXXXXXXXGIPPPVSDGYYDTRYSKAQPQGP 692
           P  PG  YP P+Y N   +G+   S            G   P + G+       + P GP
Sbjct: 101 PATPGVWYPLPIYGNAPQFGDPPGSHLLSNSGKPHPPGSQMPPNSGFVLPPAICSPPYGP 160

Query: 693 VN 698
            N
Sbjct: 161 PN 162


>BT025938-1|ABG02182.1|  207|Drosophila melanogaster IP14043p
           protein.
          Length = 207

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
 Frame = +3

Query: 516 PGNPGAQYPPPVYENVDYYGE-QRSXXXXXXXXXXXXGIPPPVSDGYYDTRYSKAQPQGP 692
           P  PG  YP P+Y N   +G+   S            G   P + G+       + P GP
Sbjct: 101 PATPGVWYPLPIYGNAPQFGDPPGSHLLSNSGKPHPPGSQMPPNSGFVLPPAICSPPYGP 160

Query: 693 VN 698
            N
Sbjct: 161 PN 162


>AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p
           protein.
          Length = 1412

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 376 TPKRVETIASINKRDINTTALPASPTRSIDSLSQRSL 486
           TPK  E +  ++  ++    LP S  RS+DSLS   L
Sbjct: 624 TPKISELLGKLSSGELEPVPLPNSGKRSLDSLSINEL 660


>AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA
           stability factor protein.
          Length = 1412

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 376 TPKRVETIASINKRDINTTALPASPTRSIDSLSQRSL 486
           TPK  E +  ++  ++    LP S  RS+DSLS   L
Sbjct: 624 TPKISELLGKLSSGELEPVPLPNSGKRSLDSLSINEL 660


>AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-PA
           protein.
          Length = 1412

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 376 TPKRVETIASINKRDINTTALPASPTRSIDSLSQRSL 486
           TPK  E +  ++  ++    LP S  RS+DSLS   L
Sbjct: 624 TPKISELLGKLSSGELEPVPLPNSGKRSLDSLSINEL 660


>AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA
           protein.
          Length = 1118

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
 Frame = +3

Query: 516 PGNPGAQYPPPVYENVDYYGE-QRSXXXXXXXXXXXXGIPPPVSDGYYDTRYSKAQPQGP 692
           P  PG  YP P+Y N   +G+   S            G   P + G+       + P GP
Sbjct: 83  PATPGVWYPLPIYGNAPQFGDPPGSHLLSNSGKPHPPGSQMPPNSGFVLPPAICSPPYGP 142

Query: 693 VN 698
            N
Sbjct: 143 PN 144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,490,633
Number of Sequences: 53049
Number of extensions: 664364
Number of successful extensions: 1812
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1812
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)