Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0820
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    25   0.66 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   1.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.1  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 15/74 (20%), Positives = 35/74 (47%)
 Frame = +2

Query: 233 ETYEEPHNDTTSLKNIYEKVKPLMNGLREPAR*WNWIATSASGSVPQLPSVHPHRCRSED 412
           +T++ P +   +  N  EK   + +G  + A   + +  +   ++  + S+HP +   E 
Sbjct: 246 QTHKSPSHSVDN-SNSSEKKSSIQHG--DDAHKTHHLDKNPENTLGTMLSIHPSKLDVEQ 302

Query: 413 LPALHDQLRSIHQE 454
           +  LH    ++HQ+
Sbjct: 303 MNLLHSNDLNMHQQ 316


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 94  PPHERALHHRSPPQSIPNR 150
           PPH    H  +PPQS PN+
Sbjct: 24  PPHYNIHHGATPPQS-PNQ 41


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 463 LITFLMYGSKLIVKGRKIFRSAAVRVDRWK 374
           +  F +Y +  I+    IF+SA   VD+W+
Sbjct: 81  IFLFAIYTNLSILTTVTIFKSAFWDVDKWR 110


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 496 SSSPFVWACSSLITFLMYGSKLIVKG 419
           SS   + +CSS+ T   YGS L   G
Sbjct: 97  SSRSVMTSCSSVPTTASYGSDLYFPG 122


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 535 APHAGPRGCPAP 500
           +PHAGP G  +P
Sbjct: 406 SPHAGPSGAYSP 417


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 351 AQVEVFLSFHRSTLTAA-DLKIFLPFTINL 437
           +Q++  LS  +  L    D+KIFLPF  ++
Sbjct: 471 SQLKNALSIDKGILREKPDVKIFLPFRFHI 500


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/26 (30%), Positives = 10/26 (38%)
 Frame = -1

Query: 559 VGCLGCCGAPHAGPRGCPAPISSSPF 482
           + CL     P    RGC A +    F
Sbjct: 31  ISCLKTTPPPEEDNRGCAASVGEGSF 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,718
Number of Sequences: 336
Number of extensions: 2864
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)