Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0818
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical pr... 124 7e-29
Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical pr... 124 7e-29
S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA s... 86 3e-17
L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA s... 86 3e-17
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 28 6.0
AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical ... 28 6.0
>Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical
protein T11G6.1b protein.
Length = 521
Score = 124 bits (299), Expect = 7e-29
Identities = 52/82 (63%), Positives = 66/82 (80%)
Frame = +3
Query: 3 LKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGIYDPMVPDAECLKVVTEILEALDIGQ 182
+ RY IAKVYRRD P M+RGRYREFYQCDFDIAG YD M+P+AECL +V E+L L+IG+
Sbjct: 154 ITRYQIAKVYRRDQPVMSRGRYREFYQCDFDIAGQYDLMLPEAECLGIVDELLTKLEIGE 213
Query: 183 YILKVNHRRLLDGMFEACGVPA 248
+ + +NHR +L+GMF G+PA
Sbjct: 214 FFINLNHRLILEGMFAVSGIPA 235
Score = 53.6 bits (123), Expect = 1e-07
Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Frame = +2
Query: 278 DKLDKSPWEEVRTEMINEKGV*PDAADRIGEYVR---LN---GSTXXXXXXXXXXXXXXX 439
DKLDK+PWE+V EMINEK + + ++GE VR LN +
Sbjct: 246 DKLDKTPWEDVEQEMINEKFLTKEQTGKLGELVRFRELNSDLNNLELLEKMSQLPDLGQN 305
Query: 440 XAALEGVEAIKTLLQYCELFGI-KIRFCLI*VLPED*IITLVLS--MKQCLHNLLKLEMR 610
+G E +K L++Y + G+ +R+ D + + L
Sbjct: 306 DKFKKGAEELKVLIEYLNVDGVTTVRYEPSLARGLDYYTGAIYEAVAPKALEGTAVENSE 365
Query: 611 NKRLDP-SLG----GGRYDNLVGMFDSKNKQVPCVGVS 709
+ P +G GGRYD LV MFDSK VPC GVS
Sbjct: 366 DTAGQPVGVGSVAAGGRYDGLVKMFDSK-ANVPCCGVS 402
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +1
Query: 514 ILFDLSLARGLDYYTGVIYEAVLTQPIK---IGNEEQTVGSIAG 636
+ ++ SLARGLDYYTG IYEAV + ++ + N E T G G
Sbjct: 330 VRYEPSLARGLDYYTGAIYEAVAPKALEGTAVENSEDTAGQPVG 373
>Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical
protein T11G6.1a protein.
Length = 520
Score = 124 bits (299), Expect = 7e-29
Identities = 52/82 (63%), Positives = 66/82 (80%)
Frame = +3
Query: 3 LKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGIYDPMVPDAECLKVVTEILEALDIGQ 182
+ RY IAKVYRRD P M+RGRYREFYQCDFDIAG YD M+P+AECL +V E+L L+IG+
Sbjct: 153 ITRYQIAKVYRRDQPVMSRGRYREFYQCDFDIAGQYDLMLPEAECLGIVDELLTKLEIGE 212
Query: 183 YILKVNHRRLLDGMFEACGVPA 248
+ + +NHR +L+GMF G+PA
Sbjct: 213 FFINLNHRLILEGMFAVSGIPA 234
Score = 53.6 bits (123), Expect = 1e-07
Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Frame = +2
Query: 278 DKLDKSPWEEVRTEMINEKGV*PDAADRIGEYVR---LN---GSTXXXXXXXXXXXXXXX 439
DKLDK+PWE+V EMINEK + + ++GE VR LN +
Sbjct: 245 DKLDKTPWEDVEQEMINEKFLTKEQTGKLGELVRFRELNSDLNNLELLEKMSQLPDLGQN 304
Query: 440 XAALEGVEAIKTLLQYCELFGI-KIRFCLI*VLPED*IITLVLS--MKQCLHNLLKLEMR 610
+G E +K L++Y + G+ +R+ D + + L
Sbjct: 305 DKFKKGAEELKVLIEYLNVDGVTTVRYEPSLARGLDYYTGAIYEAVAPKALEGTAVENSE 364
Query: 611 NKRLDP-SLG----GGRYDNLVGMFDSKNKQVPCVGVS 709
+ P +G GGRYD LV MFDSK VPC GVS
Sbjct: 365 DTAGQPVGVGSVAAGGRYDGLVKMFDSK-ANVPCCGVS 401
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +1
Query: 514 ILFDLSLARGLDYYTGVIYEAVLTQPIK---IGNEEQTVGSIAG 636
+ ++ SLARGLDYYTG IYEAV + ++ + N E T G G
Sbjct: 329 VRYEPSLARGLDYYTGAIYEAVAPKALEGTAVENSEDTAGQPVG 372
>S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 514
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/82 (48%), Positives = 52/82 (63%)
Frame = +3
Query: 3 LKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGIYDPMVPDAECLKVVTEILEALDIGQ 182
+ RY IAKVYRRD P M+RGRYREFYQCDFDIAG YD M+P+ +++ +
Sbjct: 103 ITRYQIAKVYRRDQPVMSRGRYREFYQCDFDIAGQYDLMLPELSVWELLMSCSRNWKLES 162
Query: 183 YILKVNHRRLLDGMFEACGVPA 248
+ L +L+GMF G+PA
Sbjct: 163 FSLISITVLILEGMFAVSGIPA 184
Score = 51.2 bits (117), Expect = 7e-07
Identities = 48/158 (30%), Positives = 66/158 (41%), Gaps = 14/158 (8%)
Frame = +2
Query: 278 DKLDKSPWEEVRTEMINEKGV*PDAADRIGEYVRLNGST------XXXXXXXXXXXXXXX 439
DKLDK+PWE+V EMINEK + + ++GE VR S
Sbjct: 195 DKLDKTPWEDVEQEMINEKFLTKEQTGKLGELVRFESSIAISTIWNFLKKCHNLPDLGQN 254
Query: 440 XAALEGVEAIKTLLQYCELFGI-KIRFCLI*VLPED*IITLVLS--MKQCLHNLLKLEMR 610
+G E +K L++Y + G+ +R+ D + + L
Sbjct: 255 DKFKKGAEELKVLIEYLNVDGVTTVRYEPSLARGLDYYTGAIYEAVAPKALEGTAVENSE 314
Query: 611 NKRLDP----SLGGG-RYDNLVGMFDSKNKQVPCVGVS 709
+ P S+ G RYD LV MFDSK VPC GVS
Sbjct: 315 DTAGQPVGVGSVAAGGRYDGLVKMFDSK-ANVPCCGVS 351
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +1
Query: 514 ILFDLSLARGLDYYTGVIYEAVLTQPIK---IGNEEQTVGSIAG 636
+ ++ SLARGLDYYTG IYEAV + ++ + N E T G G
Sbjct: 279 VRYEPSLARGLDYYTGAIYEAVAPKALEGTAVENSEDTAGQPVG 322
>L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 525
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/82 (48%), Positives = 52/82 (63%)
Frame = +3
Query: 3 LKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGIYDPMVPDAECLKVVTEILEALDIGQ 182
+ RY IAKVYRRD P M+RGRYREFYQCDFDIAG YD M+P+ +++ +
Sbjct: 114 ITRYQIAKVYRRDQPVMSRGRYREFYQCDFDIAGQYDLMLPELSVWELLMSCSRNWKLES 173
Query: 183 YILKVNHRRLLDGMFEACGVPA 248
+ L +L+GMF G+PA
Sbjct: 174 FSLISITVLILEGMFAVSGIPA 195
Score = 51.2 bits (117), Expect = 7e-07
Identities = 48/158 (30%), Positives = 66/158 (41%), Gaps = 14/158 (8%)
Frame = +2
Query: 278 DKLDKSPWEEVRTEMINEKGV*PDAADRIGEYVRLNGST------XXXXXXXXXXXXXXX 439
DKLDK+PWE+V EMINEK + + ++GE VR S
Sbjct: 206 DKLDKTPWEDVEQEMINEKFLTKEQTGKLGELVRFESSIAISTIWNFLKKCHNLPDLGQN 265
Query: 440 XAALEGVEAIKTLLQYCELFGI-KIRFCLI*VLPED*IITLVLS--MKQCLHNLLKLEMR 610
+G E +K L++Y + G+ +R+ D + + L
Sbjct: 266 DKFKKGAEELKVLIEYLNVDGVTTVRYEPSLARGLDYYTGAIYEAVAPKALEGTAVENSE 325
Query: 611 NKRLDP----SLGGG-RYDNLVGMFDSKNKQVPCVGVS 709
+ P S+ G RYD LV MFDSK VPC GVS
Sbjct: 326 DTAGQPVGVGSVAAGGRYDGLVKMFDSK-ANVPCCGVS 362
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +1
Query: 514 ILFDLSLARGLDYYTGVIYEAVLTQPIK---IGNEEQTVGSIAG 636
+ ++ SLARGLDYYTG IYEAV + ++ + N E T G G
Sbjct: 290 VRYEPSLARGLDYYTGAIYEAVAPKALEGTAVENSEDTAGQPVG 333
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 27 VYRRDNPAMTRGRYREFYQCDFDIAGIYDPMV---PDAECLKVVTEILEAL 170
+Y A++ +YRE + +F G+ V PDA CL + TEIL ++
Sbjct: 172 IYTSPIKALSNQKYRELEE-EFKDVGLMTGDVTLNPDASCLVMTTEILRSM 221
>AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical
protein Y43H11AL.1 protein.
Length = 367
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 12 YHIAKVYRRDNPAMTRGRYREFYQ-CDFDIAGIYDPMVPD 128
YH DNP T R R FYQ D + G Y +P+
Sbjct: 104 YHCKCELETDNPGSTEQRERVFYQTLDKNYRGEYQSSIPN 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,088,499
Number of Sequences: 27780
Number of extensions: 319967
Number of successful extensions: 696
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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