Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0817
(666 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 158 1e-37
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 157 2e-37
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 151 1e-35
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 142 5e-33
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 141 1e-32
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 130 2e-29
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 129 5e-29
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 128 1e-28
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 127 2e-28
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 120 2e-26
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 113 3e-24
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 113 4e-24
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 113 4e-24
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 111 1e-23
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 111 1e-23
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 109 6e-23
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 109 8e-23
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 103 3e-21
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 102 7e-21
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 101 2e-20
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 101 2e-20
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 99 5e-20
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 100 6e-20
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 99 8e-20
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 99 8e-20
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 99 1e-19
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 98 1e-19
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 98 1e-19
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 98 2e-19
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 97 3e-19
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 97 4e-19
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 96 8e-19
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 95 1e-18
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 95 1e-18
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 95 2e-18
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 94 2e-18
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 93 5e-18
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 93 5e-18
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 5e-18
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 93 7e-18
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 92 1e-17
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 92 1e-17
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 91 2e-17
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 91 2e-17
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 91 2e-17
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 91 2e-17
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 91 2e-17
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 91 3e-17
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 91 3e-17
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 90 4e-17
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 90 5e-17
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 90 5e-17
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 90 5e-17
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 89 7e-17
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 89 7e-17
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 89 9e-17
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 89 1e-16
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 88 2e-16
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 88 2e-16
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 88 2e-16
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 88 2e-16
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 88 2e-16
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 87 3e-16
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 87 4e-16
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 87 5e-16
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 87 5e-16
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 87 5e-16
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 87 5e-16
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 86 6e-16
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 86 8e-16
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 86 8e-16
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 85 1e-15
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 85 1e-15
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 85 1e-15
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 85 1e-15
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 85 1e-15
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 85 1e-15
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 85 1e-15
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 85 2e-15
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 85 2e-15
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 84 3e-15
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 84 3e-15
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 84 3e-15
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 84 3e-15
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 84 3e-15
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 84 3e-15
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 84 3e-15
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 83 4e-15
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 83 4e-15
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 83 4e-15
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 83 6e-15
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 83 6e-15
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 83 8e-15
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 83 8e-15
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 83 8e-15
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 83 8e-15
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 82 1e-14
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 82 1e-14
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 82 1e-14
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 82 1e-14
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 82 1e-14
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 82 1e-14
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 82 1e-14
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 82 1e-14
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 82 1e-14
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 82 1e-14
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 82 1e-14
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 82 1e-14
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 81 2e-14
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 81 2e-14
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 81 2e-14
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 81 2e-14
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 81 2e-14
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 81 2e-14
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 81 2e-14
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 81 2e-14
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 81 3e-14
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 81 3e-14
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 81 3e-14
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 81 3e-14
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 81 3e-14
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 81 3e-14
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 81 3e-14
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 81 3e-14
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 81 3e-14
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 81 3e-14
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 80 4e-14
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 80 4e-14
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 80 4e-14
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 80 4e-14
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 80 4e-14
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 80 5e-14
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 80 5e-14
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 80 5e-14
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 80 5e-14
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 80 5e-14
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 80 5e-14
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 80 5e-14
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 79 7e-14
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 79 7e-14
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 79 7e-14
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 79 7e-14
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 79 7e-14
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 79 7e-14
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 79 7e-14
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 79 1e-13
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 79 1e-13
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 79 1e-13
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 79 1e-13
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 79 1e-13
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 79 1e-13
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 79 1e-13
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 79 1e-13
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 78 2e-13
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 78 2e-13
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 78 2e-13
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 78 2e-13
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 78 2e-13
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 78 2e-13
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 78 2e-13
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 78 2e-13
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 78 2e-13
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 78 2e-13
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 78 2e-13
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 77 3e-13
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 77 3e-13
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 77 3e-13
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 77 3e-13
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 77 3e-13
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 77 3e-13
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 77 4e-13
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 77 4e-13
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 77 4e-13
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 77 4e-13
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 77 5e-13
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 77 5e-13
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 77 5e-13
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 77 5e-13
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 76 7e-13
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 76 7e-13
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 76 7e-13
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 76 7e-13
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 76 9e-13
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 76 9e-13
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 76 9e-13
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 76 9e-13
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 76 9e-13
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 75 1e-12
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 75 1e-12
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 75 1e-12
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 75 1e-12
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 2e-12
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 75 2e-12
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 75 2e-12
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 2e-12
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 75 2e-12
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 75 2e-12
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 75 2e-12
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 75 2e-12
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 75 2e-12
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 75 2e-12
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 75 2e-12
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 75 2e-12
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 75 2e-12
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 75 2e-12
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 75 2e-12
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 74 3e-12
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 74 3e-12
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 74 3e-12
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 74 3e-12
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 74 3e-12
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 74 3e-12
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 74 3e-12
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 74 3e-12
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 74 3e-12
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 74 3e-12
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 74 4e-12
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 74 4e-12
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 74 4e-12
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 74 4e-12
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 74 4e-12
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 74 4e-12
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 74 4e-12
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 74 4e-12
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 73 5e-12
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 73 5e-12
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 73 5e-12
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 73 5e-12
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 73 5e-12
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 73 5e-12
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 73 5e-12
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 73 5e-12
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 73 5e-12
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 73 5e-12
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 73 5e-12
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 73 5e-12
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 73 5e-12
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 73 6e-12
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 73 6e-12
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 73 6e-12
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 73 6e-12
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 73 8e-12
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 73 8e-12
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 73 8e-12
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 73 8e-12
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 73 8e-12
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 73 8e-12
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 73 8e-12
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 73 8e-12
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 72 1e-11
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 72 1e-11
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 72 1e-11
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 72 1e-11
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 72 1e-11
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 72 1e-11
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 72 1e-11
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 72 1e-11
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 72 1e-11
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 72 1e-11
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 71 2e-11
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 71 2e-11
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 71 2e-11
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 71 2e-11
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 71 2e-11
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 71 3e-11
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 3e-11
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 71 3e-11
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 3e-11
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 71 3e-11
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 71 3e-11
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 71 3e-11
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 71 3e-11
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 71 3e-11
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 71 3e-11
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 71 3e-11
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 70 4e-11
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 70 4e-11
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 70 4e-11
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 70 4e-11
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 70 4e-11
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 70 4e-11
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 70 6e-11
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 70 6e-11
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 70 6e-11
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 70 6e-11
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 6e-11
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 70 6e-11
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 70 6e-11
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 70 6e-11
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 8e-11
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 69 8e-11
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 69 8e-11
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 8e-11
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 69 8e-11
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 69 1e-10
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 69 1e-10
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 69 1e-10
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 69 1e-10
UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babes... 69 1e-10
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 69 1e-10
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 69 1e-10
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 69 1e-10
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 69 1e-10
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 69 1e-10
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 69 1e-10
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 69 1e-10
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 69 1e-10
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 68 2e-10
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 68 2e-10
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 68 2e-10
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 68 2e-10
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 68 2e-10
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 68 2e-10
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 2e-10
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 68 2e-10
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 68 2e-10
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 68 2e-10
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 68 2e-10
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 67 3e-10
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 67 3e-10
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 67 3e-10
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 67 3e-10
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 67 3e-10
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 67 3e-10
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 67 4e-10
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 67 4e-10
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 67 4e-10
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 67 4e-10
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 67 4e-10
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 67 4e-10
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 67 4e-10
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 67 4e-10
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 67 4e-10
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 66 5e-10
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 66 5e-10
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 66 5e-10
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 5e-10
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 66 5e-10
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 66 5e-10
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 66 5e-10
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 66 5e-10
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 66 5e-10
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 66 7e-10
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 7e-10
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 66 7e-10
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 66 7e-10
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 66 7e-10
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 66 7e-10
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 66 7e-10
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 66 9e-10
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 66 9e-10
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 66 9e-10
UniRef50_Q61FS8 Cluster: Putative uncharacterized protein CBG115... 66 9e-10
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 66 9e-10
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 66 9e-10
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 66 9e-10
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 65 1e-09
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 65 1e-09
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 65 1e-09
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 65 2e-09
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 65 2e-09
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 64 2e-09
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 64 2e-09
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Re... 64 2e-09
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 64 2e-09
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 64 2e-09
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 64 2e-09
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 64 2e-09
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 64 2e-09
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 64 3e-09
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 64 3e-09
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 64 3e-09
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 64 3e-09
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 64 3e-09
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 3e-09
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 64 3e-09
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 64 3e-09
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 64 3e-09
UniRef50_P90897 Cluster: Putative uncharacterized protein; n=2; ... 64 3e-09
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 64 4e-09
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 4e-09
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 64 4e-09
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 64 4e-09
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 4e-09
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 64 4e-09
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 64 4e-09
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 64 4e-09
UniRef50_A7SVK2 Cluster: Predicted protein; n=1; Nematostella ve... 64 4e-09
UniRef50_A7RMK9 Cluster: Predicted protein; n=1; Nematostella ve... 64 4e-09
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 64 4e-09
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 64 4e-09
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 64 4e-09
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 64 4e-09
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 63 5e-09
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 63 5e-09
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 63 5e-09
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 63 5e-09
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 63 5e-09
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 63 5e-09
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 63 5e-09
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 63 5e-09
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 63 7e-09
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 63 7e-09
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 63 7e-09
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 63 7e-09
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 63 7e-09
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 63 7e-09
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 63 7e-09
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 63 7e-09
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 63 7e-09
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 63 7e-09
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 63 7e-09
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 63 7e-09
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 63 7e-09
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 9e-09
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 62 9e-09
UniRef50_Q7RFI2 Cluster: Drosophila melanogaster BcDNA.GH02833; ... 62 9e-09
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 62 9e-09
UniRef50_Q4UG97 Cluster: ATP-dependent RNA helicase, putative; n... 62 9e-09
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 62 9e-09
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 62 9e-09
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 62 9e-09
UniRef50_Q0CF43 Cluster: ATP-dependent RNA helicase dbp7; n=10; ... 62 9e-09
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 62 1e-08
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 62 1e-08
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 62 1e-08
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 62 1e-08
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 62 1e-08
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 62 1e-08
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 62 1e-08
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 62 1e-08
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 62 1e-08
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 62 1e-08
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 62 1e-08
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 62 2e-08
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 62 2e-08
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 62 2e-08
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 62 2e-08
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 62 2e-08
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 62 2e-08
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 62 2e-08
UniRef50_A5KC62 Cluster: DEAD/DEAH box helicase, putative; n=10;... 62 2e-08
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 62 2e-08
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 62 2e-08
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 62 2e-08
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 62 2e-08
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 62 2e-08
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 61 2e-08
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 61 2e-08
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 61 2e-08
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 61 2e-08
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 61 2e-08
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 61 2e-08
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 61 2e-08
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 61 3e-08
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 61 3e-08
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 61 3e-08
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 61 3e-08
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 61 3e-08
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 61 3e-08
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 158 bits (383), Expect = 1e-37
Identities = 79/128 (61%), Positives = 95/128 (74%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPIALVLAPTRELAQQIQQVA +FG ++VRNTC+FGGAPK +QARDLERGVEIVIATPG
Sbjct: 230 GPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPG 289
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK* 614
RLIDFLE+GTT+L+RCTYLVLDEAD + K + + ++ PK+
Sbjct: 290 RLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEV 349
Query: 615 RNLLRDYL 638
R L ++L
Sbjct: 350 RQLAEEFL 357
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+T+ G +V P FEE FPDYV ++ G+ +PT IQAQGWPIAMSG++LVGVA+
Sbjct: 145 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQ 202
Score = 54.8 bits (126), Expect = 2e-06
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
+QTGSGKTLAY+LPA+VHINNQP + RG+
Sbjct: 201 AQTGSGKTLAYVLPAVVHINNQPRLERGD 229
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 157 bits (382), Expect = 2e-37
Identities = 83/143 (58%), Positives = 98/143 (68%)
Frame = +3
Query: 213 HCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 392
H ++QP + GPIALVLAPTRELAQQIQQVA +FG +SYVRNTCVFGGAPK Q R
Sbjct: 342 HINNQQPLQRGD--GPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMR 399
Query: 393 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQT 572
DL+RG EIVIATPGRLIDFL G+TNL+RCTYLVLDEAD + K +S+
Sbjct: 400 DLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPD 459
Query: 573 DRL*CGQLLGPKK*RNLLRDYLG 641
+ PK+ + L D+LG
Sbjct: 460 RQTLMWSATWPKEVKQLAEDFLG 482
Score = 80.2 bits (189), Expect = 4e-14
Identities = 36/58 (62%), Positives = 43/58 (74%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+TV G +V NPIQ F E + PDYV + ++ GYK PT IQAQGWPIAMSG N VG+AK
Sbjct: 270 ITVRG-QVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAK 326
Score = 53.2 bits (122), Expect = 5e-06
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL YILPAIVHINNQ P++RG+
Sbjct: 325 AKTGSGKTLGYILPAIVHINNQQPLQRGD 353
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 151 bits (366), Expect = 1e-35
Identities = 78/128 (60%), Positives = 88/128 (68%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPIALVLAPTRELAQQIQQVA DFG NTCVFGGAPK Q RDLERG EIVIATPG
Sbjct: 195 GPIALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLERGAEIVIATPG 254
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK* 614
RLIDFLE+G TNL+RCTYLVLDEAD + K + + ++ PK+
Sbjct: 255 RLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKEV 314
Query: 615 RNLLRDYL 638
RNL ++L
Sbjct: 315 RNLAEEFL 322
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RMLDMGFEPQIRKI+ QIRPDRQ LMWSATWPKEV+ LAE L +
Sbjct: 280 RMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKEVRNLAEEFLND 324
Score = 61.7 bits (143), Expect = 2e-08
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+T+ G + P FE+ PDY+ + G+ +PT IQAQG PIA+SG+++VG+A+
Sbjct: 110 ITLKGRNIPRPSMEFEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQ 167
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
+QTGSGKTLAYI PA+VHI +Q +RRG+
Sbjct: 166 AQTGSGKTLAYIAPALVHITHQDQLRRGD 194
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 142 bits (345), Expect = 5e-33
Identities = 75/128 (58%), Positives = 86/128 (67%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPIALVLAPTRELAQQIQQV DFG + NTC+FGGA K QA DL RGVEIVIATPG
Sbjct: 174 GPIALVLAPTRELAQQIQQVCNDFGRRMSIMNTCIFGGASKHPQADDLRRGVEIVIATPG 233
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK* 614
RLIDFLE GTTNL+R TYLVLDEAD + K +S+ ++ PK+
Sbjct: 234 RLIDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKEI 293
Query: 615 RNLLRDYL 638
R L ++L
Sbjct: 294 RKLAEEFL 301
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RMLDMGFEPQIRKII QIRPDRQ LMWSATWPKE++KLAE L E
Sbjct: 259 RMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKEIRKLAEEFLRE 303
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+T+ G V PI F E+ FP + G++EPT IQA GW IAMSG+++VG+AK
Sbjct: 89 ITMIGKNVPAPIMQFGESGFPSVFLDEMGRQGFQEPTSIQAVGWSIAMSGRDMVGIAK 146
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLAYILPA++HI+NQP + RG+
Sbjct: 145 AKTGSGKTLAYILPALIHISNQPRLLRGD 173
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 141 bits (342), Expect = 1e-32
Identities = 77/144 (53%), Positives = 93/144 (64%), Gaps = 2/144 (1%)
Frame = +3
Query: 213 HCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTS--YVRNTCVFGGAPKREQ 386
H AH++P E GP+ LVLAPTRELAQQIQ V DFG S +R TC+FGGA K Q
Sbjct: 290 HIAHQKPLQRGE--GPVVLVLAPTRELAQQIQTVVRDFGTHSKPLIRYTCIFGGALKGPQ 347
Query: 387 ARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYA 566
RDLERGVE+VIATPGRLIDFLE+G TNL+RCTYLVLDEAD + K + +
Sbjct: 348 VRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 407
Query: 567 QTDRL*CGQLLGPKK*RNLLRDYL 638
++ PK+ + L D+L
Sbjct: 408 PDRQVLMWSATWPKEVQALAEDFL 431
Score = 77.8 bits (183), Expect = 2e-13
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+TV G V +P Q FEE NFPD+V + MG+ PT IQAQGWPIA+SG++LVG+A+
Sbjct: 217 ITVMGNSVPHPSQDFEEGNFPDFVMNEINKMGFPNPTAIQAQGWPIALSGRDLVGIAQ 274
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
+QTGSGKTLAY+LP IVHI +Q P++RGE
Sbjct: 273 AQTGSGKTLAYMLPGIVHIAHQKPLQRGE 301
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 130 bits (315), Expect = 2e-29
Identities = 61/85 (71%), Positives = 70/85 (82%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPIAL+LAPTRELAQQI+QV DFG ++NTC+FGG KR+Q DL+ GVEIVIATPG
Sbjct: 160 GPIALILAPTRELAQQIKQVTDDFGRAMKIKNTCLFGGGAKRQQGDDLKYGVEIVIATPG 219
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLIDFL TNL+RC+YLVLDEAD
Sbjct: 220 RLIDFLSSEHTNLRRCSYLVLDEAD 244
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/43 (76%), Positives = 35/43 (81%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIR IIEQIRPD QTLMWSATWP V +L + L
Sbjct: 245 RMLDMGFEPQIRAIIEQIRPDHQTLMWSATWPDAVSRLVKDYL 287
Score = 62.9 bits (146), Expect = 7e-09
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+T G +V +P FEE FP + + + PTPIQ+QGWPIAMSG+++VG+AK
Sbjct: 75 ITTKGRDVPDPALTFEEVGFPAEIADEWRYAEFTTPTPIQSQGWPIAMSGRDMVGIAK 132
Score = 44.4 bits (100), Expect = 0.003
Identities = 17/29 (58%), Positives = 26/29 (89%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL+Y+LPA++HI+ Q +RRG+
Sbjct: 131 AKTGSGKTLSYLLPALMHIDQQSRLRRGD 159
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 129 bits (312), Expect = 5e-29
Identities = 87/234 (37%), Positives = 119/234 (50%), Gaps = 31/234 (13%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKR- 178
+T+ G PI F +A+FP YV + +KEPTPIQAQG+P+A+SG+++VG+A+
Sbjct: 74 ITIRGTGCPKPIIKFHQAHFPQYVMDVLMQQNFKEPTPIQAQGFPLALSGRDMVGIAQTG 133
Query: 179 -------VPAKRWP--------------------TSCQPLC--T*TTNRLFGEVR-SDCF 268
PA +P TS P C + L G R + F
Sbjct: 134 SGKTLSVSPAAPFPYRPSRRRSSLHQSFGLLFPLTSVSPACYCAHQPSALLGAWRWTHMF 193
Query: 269 GLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLGEGSRNSHCYSR*IN*F 448
G G ++ + SA R + H+ V C+ ++PG GE + H ++R +
Sbjct: 194 GFGPHEGIGPAGSAGSIRLRKVLTHQKHLRVRRCAEGTSNPGSGERCGDLHRHARASHRL 253
Query: 449 LGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 610
G +QL RMLDMGFEPQIRKI++QIRPDRQTLMWSATWPKE
Sbjct: 254 PGGREDQLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 307
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 128 bits (309), Expect = 1e-28
Identities = 68/128 (53%), Positives = 80/128 (62%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LVLAPTRELA QIQ+ FG +S +RNTCV+GG PK Q RDL RGVE+ IATPG
Sbjct: 207 GPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPG 266
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK* 614
RLID LE G TNL+R TYLVLDEAD + K + + + PK+
Sbjct: 267 RLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEV 326
Query: 615 RNLLRDYL 638
R L D+L
Sbjct: 327 RALASDFL 334
Score = 72.9 bits (171), Expect = 6e-12
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRV 181
+T++G V P++ F+EA FP YV VK G+ PT IQ+QGWP+A+SG+++VG+A+
Sbjct: 122 MTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETG 181
Query: 182 PAKRWPTSCQP 214
K T C P
Sbjct: 182 SGKTL-TYCLP 191
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL Y LP+IVHIN QP + G+
Sbjct: 178 AETGSGKTLTYCLPSIVHINAQPLLAPGD 206
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 127 bits (307), Expect = 2e-28
Identities = 62/85 (72%), Positives = 68/85 (80%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI L+LAPTRELA QIQQ + FG S R+TC++GGAPK Q RDL RGVEIVIATPG
Sbjct: 324 GPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 383
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLID LE G TNL+R TYLVLDEAD
Sbjct: 384 RLIDMLEGGHTNLRRVTYLVLDEAD 408
Score = 82.6 bits (195), Expect = 8e-15
Identities = 30/58 (51%), Positives = 46/58 (79%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+TV G +V P++YF+EANFPDY Q + G+ EPTPIQ+QGWP+A+ G++++G+A+
Sbjct: 239 ITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQ 296
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/60 (63%), Positives = 41/60 (68%)
Frame = +2
Query: 458 GHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
GH L V RMLDMGFEPQIRKI+ QIRPDRQTL WSATWP+EV+ LA L
Sbjct: 392 GHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFL 451
Score = 43.6 bits (98), Expect = 0.004
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
+QTGSGKTL+Y+LP +VH+ QP + +G+
Sbjct: 295 AQTGSGKTLSYLLPGLVHVGAQPRLEQGD 323
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 120 bits (290), Expect = 2e-26
Identities = 59/85 (69%), Positives = 68/85 (80%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LVLAPTRELA QIQQ A FG +S ++NTC++GG PK Q RDL++GVEIVIATPG
Sbjct: 169 GPIVLVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPG 228
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLID LE TNL+R T +VLDEAD
Sbjct: 229 RLIDMLESNHTNLRRVT-IVLDEAD 252
Score = 76.6 bits (180), Expect = 5e-13
Identities = 29/58 (50%), Positives = 44/58 (75%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+T+ G +V PI+ F + FPDYV Q ++ G+ EPTPIQAQGWP+A+ G++L+G+A+
Sbjct: 84 ITIEGRDVPKPIKSFHDVGFPDYVLQEIEKAGFTEPTPIQAQGWPMALKGRDLIGIAE 141
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
RMLDMGFEPQIRK I PDRQTL WSATWPK V ++
Sbjct: 253 RMLDMGFEPQIRKCISDT-PDRQTLYWSATWPKNVNHVS 290
Score = 46.0 bits (104), Expect = 8e-04
Identities = 18/29 (62%), Positives = 25/29 (86%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT+AY+LPAIVH+N QP + G+
Sbjct: 140 AETGSGKTIAYLLPAIVHVNAQPILDHGD 168
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 113 bits (273), Expect = 3e-24
Identities = 64/136 (47%), Positives = 83/136 (61%)
Frame = +3
Query: 228 QPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 407
QPT + GPI LVLAPTRELA QI++ + FG +S ++ C++GGA K Q L++G
Sbjct: 166 QPTV-KKGDGPIVLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRALLQQG 224
Query: 408 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*C 587
V++VIATPGRLIDFLE TT L+R TYLVLDEAD + K L + +
Sbjct: 225 VDVVIATPGRLIDFLESETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLM 284
Query: 588 GQLLGPKK*RNLLRDY 635
PK +NL +DY
Sbjct: 285 FSATWPKNVQNLAQDY 300
Score = 46.8 bits (106), Expect = 5e-04
Identities = 17/29 (58%), Positives = 27/29 (93%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL+++LP+IVHIN QP +++G+
Sbjct: 145 AETGSGKTLSFLLPSIVHINAQPTVKKGD 173
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/52 (30%), Positives = 34/52 (65%)
Frame = +2
Query: 20 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+V +P + + +FP Y+ V +++P+PIQ+ +P+ +SG +L+G+A+
Sbjct: 95 KVPDPFLSWTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAE 146
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 113 bits (272), Expect = 4e-24
Identities = 61/126 (48%), Positives = 75/126 (59%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LVLAPTREL +QI++ A FG +RNT ++GG PKR Q + GVEI IA PG
Sbjct: 61 GPICLVLAPTRELVEQIREQANQFGSIFKLRNTAIYGGVPKRPQQASIRNGVEICIACPG 120
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK* 614
RLID LE+G TNL R TYLVLDEAD + K +S+ + PK+
Sbjct: 121 RLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEV 180
Query: 615 RNLLRD 632
+ L RD
Sbjct: 181 QKLARD 186
Score = 83.4 bits (197), Expect = 4e-15
Identities = 43/74 (58%), Positives = 51/74 (68%)
Frame = +2
Query: 422 CYSR*IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 601
C R I+ L +G+ L+ V RMLDMGFEPQIRK++ QIRPDRQTL+WSATW
Sbjct: 118 CPGRLID-LLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATW 176
Query: 602 PKEVKKLAEGLLGE 643
PKEV+KLA L E
Sbjct: 177 PKEVQKLARDLCKE 190
Score = 41.9 bits (94), Expect = 0.013
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL ++LPA++HI QP +R G+
Sbjct: 32 AETGSGKTLGFLLPAMIHIRAQPLLRYGD 60
Score = 41.1 bits (92), Expect = 0.023
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +2
Query: 104 EPTPIQAQGWPIAMSGKNLVGVAK 175
EPT IQ QGWP+A+SG +++G+A+
Sbjct: 10 EPTAIQVQGWPVALSGHDMIGIAE 33
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 113 bits (272), Expect = 4e-24
Identities = 55/85 (64%), Positives = 65/85 (76%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LVLAPTRELA+QI++ A FG +S ++ + +GG PKR Q L RGVEI+IA PG
Sbjct: 283 GPIVLVLAPTRELAEQIKETALVFGRSSKLKTSVAYGGVPKRFQTIALRRGVEILIACPG 342
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLIDFLE TNL+R TYLVLDEAD
Sbjct: 343 RLIDFLESSVTNLRRVTYLVLDEAD 367
Score = 76.2 bits (179), Expect = 7e-13
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIRKI+ QIRPDRQTLM+SATWPKEV L+ LL
Sbjct: 368 RMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKEVIALSRSLL 410
Score = 68.5 bits (160), Expect = 1e-10
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V G +V P+ FE +FP Y+ ++ G+KEPTPIQ Q WPIA+SG++++G+A+
Sbjct: 200 VHGRDVPKPVVKFEYTSFPRYILSSIEAAGFKEPTPIQVQSWPIALSGRDMIGIAE 255
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLA++LPAIVHIN Q +R G+
Sbjct: 254 AETGSGKTLAFLLPAIVHINAQALLRPGD 282
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 111 bits (268), Expect = 1e-23
Identities = 54/85 (63%), Positives = 63/85 (74%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPIALVLAPTRELA QIQ+ FG + + CV+GGAPK Q ++L G +IVIATPG
Sbjct: 286 GPIALVLAPTRELANQIQEQCFKFGSKCKISSVCVYGGAPKIYQEKELRNGCDIVIATPG 345
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLIDFLE +L+R TYLVLDEAD
Sbjct: 346 RLIDFLESNVIDLKRVTYLVLDEAD 370
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
RMLDMGFEP IRKI+ QIRPDRQTLM+SATWP+ V++LA
Sbjct: 371 RMLDMGFEPSIRKIVGQIRPDRQTLMFSATWPQTVRRLA 409
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
+QTGSGKTL+++LPA+VHIN Q P++ GE
Sbjct: 257 AQTGSGKTLSFMLPALVHINAQDPVKPGE 285
Score = 33.5 bits (73), Expect = 4.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 20 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 127
EV P + E FP Y+ ++ + EP PIQAQ
Sbjct: 188 EVPQPFIKWNETKFPKYIMSVIEDSKFSEPMPIQAQ 223
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 111 bits (267), Expect = 1e-23
Identities = 54/85 (63%), Positives = 62/85 (72%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LVLAPTRELA+QI+Q F S +RNTC +GG PK Q L++GV I+IA PG
Sbjct: 186 GPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPG 245
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLID LE+ TNL R TYLVLDEAD
Sbjct: 246 RLIDLLEQNVTNLMRVTYLVLDEAD 270
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
+MLDMGFE QIRKI++QIRPDRQTLMWSATWPKEV+ LA+ L E
Sbjct: 271 KMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKE 315
Score = 59.3 bits (137), Expect = 8e-08
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ G V P+ + FPDYV + +K PTPIQ QGWPIA+SGK+++G A+
Sbjct: 103 LEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAE 158
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 151 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGE 255
K+ +++TGSGKTLA+ILPA VHI QP ++ G+
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGD 185
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 109 bits (262), Expect = 6e-23
Identities = 52/87 (59%), Positives = 66/87 (75%)
Frame = +3
Query: 249 R*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 428
R GP LVLAPTRELA QI + A FG +S + +TC++GGAPK Q RDL+RGV++V+AT
Sbjct: 220 RSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVAT 279
Query: 429 PGRLIDFLEKGTTNLQRCTYLVLDEAD 509
PGRL D LE +L++ +YLVLDEAD
Sbjct: 280 PGRLNDILEMRRISLKQVSYLVLDEAD 306
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIRKI+++I P RQTLM++ATWPKEV+++AE LL
Sbjct: 307 RMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLL 349
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ +++V +AK
Sbjct: 138 ITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAK 195
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 109 bits (261), Expect = 8e-23
Identities = 52/90 (57%), Positives = 65/90 (72%)
Frame = +3
Query: 240 YSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 419
++ R GP LVL+PTRELA QIQ A FG +S + + C++GGAPK Q RDLERG +IV
Sbjct: 298 HNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIV 357
Query: 420 IATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+ATPGRL D LE +L + +YLVLDEAD
Sbjct: 358 VATPGRLNDILEMRRVSLHQVSYLVLDEAD 387
Score = 75.8 bits (178), Expect = 9e-13
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIRKI++Q++P RQTLM++ATWPKEV+K+A LL
Sbjct: 388 RMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLL 430
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 59 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F + V+ G+ PTPIQAQ WPIA+ +++V VAK
Sbjct: 238 FKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAK 276
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 103 bits (248), Expect = 3e-21
Identities = 52/96 (54%), Positives = 65/96 (67%)
Frame = +3
Query: 222 HKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 401
H Q R GP LVL+PTRELA QIQ A FG +S + C++GGAPK Q +++E
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 281
Query: 402 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
RGV+IV+ATPGRL D LE +L + +YLVLDEAD
Sbjct: 282 RGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEAD 317
Score = 69.7 bits (163), Expect = 6e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIRKI+ ++ RQTLM++ATWPKEV+K+A LL
Sbjct: 318 RMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLL 360
Score = 59.3 bits (137), Expect = 8e-08
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+TVSG +V P+ FE P+ + + V + G+ P+PIQAQ WPIAM +++V +AK
Sbjct: 149 ITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAK 206
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 102 bits (245), Expect = 7e-21
Identities = 50/87 (57%), Positives = 62/87 (71%)
Frame = +3
Query: 249 R*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 428
R GP L+LAPTRELA QIQ A FG +S + TC++GGAPK Q ++LERG +IV+AT
Sbjct: 505 RNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVAT 564
Query: 429 PGRLIDFLEKGTTNLQRCTYLVLDEAD 509
PGRL D LE + Q+ + LVLDEAD
Sbjct: 565 PGRLNDILEMKMIDFQQVSLLVLDEAD 591
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIRKI+ +I P RQTLM++ATWPKEV+K+A LL
Sbjct: 592 RMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLL 634
Score = 52.8 bits (121), Expect = 7e-06
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
VT +G + P FE + P + + + + G+ PTPIQAQ WPIA+ +++V +AK
Sbjct: 423 VTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAK 480
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 101 bits (242), Expect = 2e-20
Identities = 55/128 (42%), Positives = 73/128 (57%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LVL+PTRELAQQI +VA F +R TC+FGGA + QA DL +V+ATPG
Sbjct: 198 GPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRGPQANDLRHLPSLVVATPG 257
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK* 614
RLIDF+E G + R +LVLDEAD + K + ++ + PK+
Sbjct: 258 RLIDFIEGGQCPMNRVNFLVLDEADQMLDMGFEPQIRKIIGHISKDRQTMMFSATWPKEI 317
Query: 615 RNLLRDYL 638
+ L D+L
Sbjct: 318 QQLAADFL 325
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +2
Query: 20 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+V +P FEE N PD + + + +++PTPIQ+ P+A+ G +L+G+AK
Sbjct: 119 DVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAK 170
Score = 40.7 bits (91), Expect = 0.031
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT A+++PA+VHI Q P+ RG+
Sbjct: 169 AKTGSGKTAAFLIPAMVHIGLQEPMYRGD 197
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 101 bits (241), Expect = 2e-20
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
PI+LVLAPTRELA QI + A F + S VR V+GGA +Q RDLERG +++ATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 326
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D +E+G L C YLVLDEAD
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEAD 350
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQ--IRPD--RQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGFEPQIR+I+EQ + P R T+M+SAT+PKE++ LA L E F ++
Sbjct: 351 RMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 405
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 99 bits (238), Expect = 5e-20
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP+ L+L PTRELA QIQ+ + F + + C++GGA KR Q L R +IV+ATPG
Sbjct: 141 GPMMLILVPTRELAMQIQEHISYFSEAYNMNSACIYGGADKRPQEMALARDPDIVVATPG 200
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSE-KSLSKYAQTDR 578
RLIDFL+ TNL TYLVLDEAD + D+ + + + + Y + DR
Sbjct: 201 RLIDFLDAQVTNLHNVTYLVLDEAD--RMLDMGFEQQVRKIDSYIREDR 247
Score = 59.7 bits (138), Expect = 6e-08
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
RMLDMGFE Q+RKI IR DRQT+ +SATWPK V+ LA
Sbjct: 226 RMLDMGFEQQVRKIDSYIREDRQTVFFSATWPKTVQNLA 264
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V + ++V P +++ FP+ + + + Y PTPIQA +PI MSG +L+G+A+
Sbjct: 59 VEQNDIQVPQPFIEWKDCQFPNQLNKRISLKAYNRPTPIQASVFPIIMSGHDLIGIAQ 116
Score = 39.1 bits (87), Expect = 0.094
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQ 234
+QTGSGKT+AY+LP +VHI +Q
Sbjct: 115 AQTGSGKTIAYLLPGLVHIESQ 136
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 99.5 bits (237), Expect = 6e-20
Identities = 50/109 (45%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPIA+++ PTREL QQI FG +R+ V+GG EQA+ L+ G EIV+ TPG
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSE-KSLSKYAQTDR 578
RLID ++K TNLQR +YLV DEAD ++D+ + + +S++ + + DR
Sbjct: 386 RLIDHVKKKATNLQRVSYLVFDEAD--RMFDMGFEYQVRSIASHVRPDR 432
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFE Q+R I +RPDRQTL++SAT+ K+++KLA +L
Sbjct: 411 RMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDIL 453
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
VSG P F F + + ++ Y +PTPIQ QG P+A+SG++++G+AK
Sbjct: 243 VSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAK 298
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT A+I P ++HI +Q + G+
Sbjct: 297 AKTGSGKTAAFIWPMLIHIMDQKELEPGD 325
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 99.1 bits (236), Expect = 8e-20
Identities = 53/98 (54%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = +3
Query: 222 HKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 401
H QP + PI LVLAPTRELAQQ +V D G S VR CV+GGAPK EQ ++
Sbjct: 90 HSQPPCKPGQ--PICLVLAPTRELAQQTAKVFDDAGEASGVRCVCVYGGAPKYEQKAQMK 147
Query: 402 R--GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
G +++ATPGRL DF+E+G L R T LVLDEAD
Sbjct: 148 AGGGAAVIVATPGRLRDFMEEGVIKLDRVTMLVLDEAD 185
Score = 75.4 bits (177), Expect = 1e-12
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTSCQ 211
P+ F +A F + + T +K P+PIQAQ WPI MSG ++VG+A K
Sbjct: 27 PVSSFADAGFSKELLR--VTAQFKTPSPIQAQSWPIIMSGHDMVGIAATGSGKTLAFGMP 84
Query: 212 PLCT*TTNRLFGEVRSDCFGLGAYQRVS--TTNSASCCRFWTHILCS*HVCVWWCS*K-- 379
L + + C L + ++ T + + C VCV+ + K
Sbjct: 85 ALTQIHSQPPCKPGQPICLVLAPTRELAQQTAKVFDDAGEASGVRC---VCVYGGAPKYE 141
Query: 380 -RASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIE 556
+A G G+ + F+ +G +L V + RMLD+GFEP+IR I
Sbjct: 142 QKAQMKAGGGAAVIVATPGRLRDFMEEGVIKLDRVTMLVLDEADRMLDLGFEPEIRAIAG 201
Query: 557 QIRPDRQTLMWSATWPKEVKKLA 625
R DRQT+M+SATWP+ V+ LA
Sbjct: 202 ATRADRQTVMFSATWPQSVQSLA 224
Score = 38.3 bits (85), Expect = 0.16
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1
Query: 175 TGSGKTLAYILPAIVHINNQPPIRRGE 255
TGSGKTLA+ +PA+ I++QPP + G+
Sbjct: 73 TGSGKTLAFGMPALTQIHSQPPCKPGQ 99
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 99.1 bits (236), Expect = 8e-20
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Frame = +3
Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
L + H ++P E GPIA+++ PTRELA QI + F +R C +GGAP
Sbjct: 474 LPMFRHIKDQRPLKTGE--GPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPI 531
Query: 378 REQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEAD 509
++Q DL+RG EIV+ TPGR+ID L TNL RCTYLVLDEAD
Sbjct: 532 KDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEAD 578
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM D+GFEPQ+ +II IRPDRQT+++SAT+P+ ++ LA +L
Sbjct: 579 RMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVL 621
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ + G++ P+ + + + ++GY++PT IQAQ P SG++++GVAK
Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAK 463
Score = 39.5 bits (88), Expect = 0.071
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT+A++LP HI +Q P++ GE
Sbjct: 462 AKTGSGKTIAFLLPMFRHIKDQRPLKTGE 490
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 98.7 bits (235), Expect = 1e-19
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3
Query: 225 KQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 404
K + YS + P ALVLAPTRELA QI + A F + S+VR V+GGAP Q R+++R
Sbjct: 227 KAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDR 286
Query: 405 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
G ++++ATPGRL D LE+G +L YLVLDEAD
Sbjct: 287 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEAD 321
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIR----PDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGFEPQIR I+E+ +RQTLM+SAT+P +++ LA L F S+
Sbjct: 322 RMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSV 376
Score = 38.7 bits (86), Expect = 0.12
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V SG +V PI F + + + +K + +PTP+Q PI G++L+ A+
Sbjct: 142 VDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQ 199
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 98.3 bits (234), Expect = 1e-19
Identities = 51/86 (59%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQ-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 431
GPIALVLAPTRELA QI+ + + TCV+GG PK Q R L GV + IATP
Sbjct: 218 GPIALVLAPTRELAVQIETETRKALTRVPSIMTTCVYGGTPKGPQQRALRAGVHVCIATP 277
Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
GRLID LE TNL R TYL LDEAD
Sbjct: 278 GRLIDLLETNCTNLLRVTYLTLDEAD 303
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
RMLDMGFE QIRKI QIR DRQTLM+SATWP+E++ LA
Sbjct: 304 RMLDMGFEDQIRKICSQIRTDRQTLMFSATWPREIRNLA 342
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+T+ G V P+ F + PD + Q G+++PTPIQ+ WP+ ++ +++VGVAK
Sbjct: 133 ITIYGDRVPQPMLEFSDLVAPDAIHQAFMDAGFQKPTPIQSVSWPVLLNSRDIVGVAK 190
Score = 41.1 bits (92), Expect = 0.023
Identities = 15/29 (51%), Positives = 25/29 (86%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT+A+++PA +HI QPP++ G+
Sbjct: 189 AKTGSGKTMAFMIPAALHIMAQPPLQPGD 217
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 98.3 bits (234), Expect = 1e-19
Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI L+ APTREL QQI A FG + VFGG K EQ++ L+ G EIV+ATPG
Sbjct: 179 GPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPG 238
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSE-KSLSKYAQTDR 578
RLID ++ TNL R TYLV DEAD ++D+ + + +S++ + DR
Sbjct: 239 RLIDHVKAKATNLHRVTYLVFDEAD--RMFDMGFEPQVRSIANNVRPDR 285
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQ+R I +RPDRQTL++SAT+ K+V+ L +L
Sbjct: 264 RMFDMGFEPQVRSIANNVRPDRQTLLFSATFKKKVEHLCRDIL 306
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK-- 175
+ VSG P F F + + ++ + Y +PT IQ Q PIA+SG++++G+AK
Sbjct: 94 IKVSGAMPARPCISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTG 153
Query: 176 --RVPAKRWP 199
+ A WP
Sbjct: 154 SGKTAAFLWP 163
Score = 38.7 bits (86), Expect = 0.12
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT A++ PA+VHI +QP ++ G+
Sbjct: 150 AKTGSGKTAAFLWPALVHIMDQPELQVGD 178
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 97.9 bits (233), Expect = 2e-19
Identities = 51/99 (51%), Positives = 64/99 (64%)
Frame = +3
Query: 213 HCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 392
H +QP + GPI LVLAPTREL QI++V +F +R+T V+GGA + Q R
Sbjct: 148 HAKDQQPLRRGD--GPIVLVLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIR 205
Query: 393 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
L G E+VIATPGRLID ++G L R T+LVLDEAD
Sbjct: 206 ALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEAD 244
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/63 (55%), Positives = 43/63 (68%)
Frame = +2
Query: 455 KGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGL 634
+GH L+ V RMLDMGFEPQ+RKII + +RQTLMWSATWP+EV+ LAE
Sbjct: 227 QGHAPLSRVTFLVLDEADRMLDMGFEPQLRKIIPKTNANRQTLMWSATWPREVRGLAESY 286
Query: 635 LGE 643
+ E
Sbjct: 287 MNE 289
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V G V +PIQ FEEA F V + G+ EPT IQ QGWP+A+SG+++VG+A+
Sbjct: 77 VKGTNVPHPIQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQ 132
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
+QTGSGKTL++ILPA+VH +Q P+RRG+
Sbjct: 131 AQTGSGKTLSFILPALVHAKDQQPLRRGD 159
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 97.1 bits (231), Expect = 3e-19
Identities = 44/87 (50%), Positives = 59/87 (67%)
Frame = +3
Query: 249 R*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 428
R GP L+LAPTREL QI A F + ++ FGG P+ Q +D + G +I +AT
Sbjct: 224 REGPRVLILAPTRELVCQIADEAIKFTKGTAIKTVRCFGGVPQSSQMKDFQSGCDICVAT 283
Query: 429 PGRLIDFLEKGTTNLQRCTYLVLDEAD 509
PGRLIDF+++G T+L RCT+L+LDEAD
Sbjct: 284 PGRLIDFIKRGVTSLSRCTFLILDEAD 310
Score = 64.9 bits (151), Expect = 2e-09
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RML+MGFE Q++ II QIRPDRQT+MW+ATWP+ +++ A G +
Sbjct: 311 RMLEMGFEVQVQDIIGQIRPDRQTVMWTATWPQAIQQFALGFM 353
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V+G E + FEE NFP + +K Y +PTPIQA GWPI + GK++VG+A+
Sbjct: 141 IQVNGCESIKALLTFEECNFPQSILDVIKEQNYIKPTPIQAIGWPIVLQGKDVVGIAE 198
Score = 35.5 bits (78), Expect = 1.2
Identities = 12/23 (52%), Positives = 21/23 (91%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQP 237
++TGSGKT+++++PAI+HI + P
Sbjct: 197 AETGSGKTISFLIPAIIHILDTP 219
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 96.7 bits (230), Expect = 4e-19
Identities = 48/85 (56%), Positives = 56/85 (65%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP A++LAPTRELAQQI++ FG +R V GG + +Q L G EIVIATPG
Sbjct: 468 GPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPG 527
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLID LE L RCTY+VLDEAD
Sbjct: 528 RLIDVLENRYLVLSRCTYVVLDEAD 552
Score = 56.8 bits (131), Expect = 4e-07
Identities = 21/58 (36%), Positives = 40/58 (68%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+T G ++ NPI+ +++++ P ++ + + GYKEPTPIQ Q PI + ++++GVA+
Sbjct: 379 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAE 436
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 95.9 bits (228), Expect = 8e-19
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP A+++APTRELAQQI++ FG ++ V GGA + +Q L GVE+VIATPG
Sbjct: 378 GPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPG 437
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D LE L +CTY++LDEAD
Sbjct: 438 RLLDVLENRYLLLNQCTYVILDEAD 462
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++GVA+
Sbjct: 289 ISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAE 346
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGEVR 261
++TGSGKT A++LP +V I + P + R E R
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQEHR 375
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 95.5 bits (227), Expect = 1e-18
Identities = 53/92 (57%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Frame = +3
Query: 243 SER*GPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDLERGVEI 416
++R GPIALVLAPTRELA QI A F S R +FGG KR+Q + L G EI
Sbjct: 124 TKREGPIALVLAPTRELASQIANEAHKFTKFGVSGARCCAIFGGVSKRDQFKKLRAGAEI 183
Query: 417 VIATPGRLIDFL-EKGTTNLQRCTYLVLDEAD 509
V+ATPGRL+D L K +TNL+R TYL LDEAD
Sbjct: 184 VVATPGRLVDVLCMKNSTNLRRVTYLALDEAD 215
Score = 52.4 bits (120), Expect = 9e-06
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFE +R I + +RPDRQ +M+SAT P +++LA +L
Sbjct: 216 RMLDMGFEKIVRSICQAVRPDRQCVMFSATMPAAMQRLARDVL 258
Score = 36.7 bits (81), Expect = 0.50
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLA++LPA I+ Q P+ + E
Sbjct: 99 AKTGSGKTLAFLLPAYAQISRQRPLTKRE 127
Score = 33.9 bits (74), Expect = 3.5
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 14 GVEVHNPIQYFEEANFPDY-VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
G E PI F + D + ++ MGY+ PT +QAQ P+ SG + + +AK
Sbjct: 46 GAEDVAPISRFGQGGALDVDCLRALRRMGYESPTAVQAQCLPVIWSGHDALVMAK 100
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 95.1 bits (226), Expect = 1e-18
Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Frame = +3
Query: 204 LASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKR 380
+ HC + P + GP+ALVLAPTRELAQQI++ F + ++N V GG
Sbjct: 176 MLQHCLVQPPIRRGD--GPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIE 233
Query: 381 EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+Q +L GVEI +ATPGR ID L++G T+L R +Y+VLDEAD
Sbjct: 234 KQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEAD 276
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIR+I+ + QTL++SAT P E++ LA+ L
Sbjct: 277 RMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALAKEYL 319
Score = 39.9 bits (89), Expect = 0.054
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT A+ +P + H QPPIRRG+
Sbjct: 162 AETGSGKTAAFTIPMLQHCLVQPPIRRGD 190
Score = 38.3 bits (85), Expect = 0.16
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 VTVSG--VEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
VTVS PI+ F + + + + Y P+ IQAQ PIA+SG++L+G A+
Sbjct: 104 VTVSSDSTAAPGPIESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAE 163
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 94.7 bits (225), Expect = 2e-18
Identities = 44/91 (48%), Positives = 60/91 (65%)
Frame = +3
Query: 237 AYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 416
A ++ GPI LV+ PTREL QQ+ + + + + GG K Q ++L GV+I
Sbjct: 255 AVEKKEGPIGLVVVPTRELGQQVYLETKKYAQLFQISVSALLGGENKHHQWKELRAGVDI 314
Query: 417 VIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+IATPGRLI+ ++K TNLQRCTY+VLDEAD
Sbjct: 315 IIATPGRLIEMVKKKATNLQRCTYIVLDEAD 345
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
+M +GFE QIR II QIRPD+Q L+++AT K++++L +L
Sbjct: 346 QMFSLGFEYQIRSIIGQIRPDKQILLFTATMKKKIRQLCVDML 388
Score = 41.1 bits (92), Expect = 0.023
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V G V PI F + + +++PT IQ+Q P +SG+N++GVAK
Sbjct: 176 IHVKGNNVPKPIISFGHLQLDQKLVNKIVAQNFEKPTAIQSQALPCVLSGRNVIGVAK 233
Score = 35.9 bits (79), Expect = 0.88
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT+AY+ P +VH++ Q + + E
Sbjct: 232 AKTGSGKTIAYVWPMLVHVSAQRAVEKKE 260
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 94.3 bits (224), Expect = 2e-18
Identities = 53/100 (53%), Positives = 65/100 (65%)
Frame = +3
Query: 210 SHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 389
+H A ++P + GP+ +VLAPTRELAQQI++ V CV+GGAPK Q
Sbjct: 162 AHIAVQEPLRSGD--GPMVVVLAPTRELAQQIEEETKKV-IPGDVYCGCVYGGAPKGPQL 218
Query: 390 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
L RGV I++ATPGRLIDFL+ NL R TYLVLDEAD
Sbjct: 219 GLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVLDEAD 258
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/39 (76%), Positives = 37/39 (94%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
RMLDMGFEPQ+RKI QIRPDRQT+M+SATWP+E+++LA
Sbjct: 259 RMLDMGFEPQVRKICGQIRPDRQTVMFSATWPREIQRLA 297
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEE--ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+T+ G + P+ F+ P Y+ + + + PTP+QAQ WP+ +SG++LVGVAK
Sbjct: 88 ITIFGDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGVAK 147
Score = 39.1 bits (87), Expect = 0.094
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL +++PA+ HI Q P+R G+
Sbjct: 146 AKTGSGKTLGFMVPALAHIAVQEPLRSGD 174
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 93.1 bits (221), Expect = 5e-18
Identities = 47/108 (43%), Positives = 68/108 (62%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI L+LAPTREL QQ+ + + + + GG K EQ + L+ GVEI+IATPG
Sbjct: 135 GPIGLILAPTRELCQQVYTESKRYAKIYNISVGALLGGENKHEQWKMLKAGVEILIATPG 194
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDR 578
RL++ ++K TNL+RCTY+V+DEAD + K +S+ + + DR
Sbjct: 195 RLMEMIQKKATNLRRCTYVVIDEADKMFSMGF-EKQIRSIMQQIRPDR 241
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
+M MGFE QIR I++QIRPDRQTL+++AT K+++ L +L
Sbjct: 220 KMFSMGFEKQIRSIMQQIRPDRQTLLFTATLKKKIQNLVMDVL 262
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ VSGV PI F F + + + + +G+++PT IQ Q P +SG+++VGVAK
Sbjct: 50 IKVSGVRPPKPIVSFGHLGFDEELMRQITKLGFEKPTQIQCQALPCGLSGRDIVGVAK 107
Score = 33.9 bits (74), Expect = 3.5
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT++Y+ P ++HI +Q + + E
Sbjct: 106 AKTGSGKTVSYLWPLLIHILDQRELEKNE 134
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 93.1 bits (221), Expect = 5e-18
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+A++L+PTRELA QI A F + + V+ +GG P +Q R+LERGV+I++ATPGR
Sbjct: 225 PLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGR 284
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D LE+G +LQ +L LDEAD
Sbjct: 285 LNDLLERGRVSLQMVRFLALDEAD 308
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Frame = +2
Query: 437 IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQI-RPD---RQTLMWSATWP 604
+N L +G L V + RMLDMGFEPQIRKI++Q+ P RQT+++SAT+P
Sbjct: 285 LNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 344
Query: 605 KEVKKLAEGLLGETTFRSI 661
+E+++LA L F ++
Sbjct: 345 REIQRLASDFLSNYIFLAV 363
Score = 36.7 bits (81), Expect = 0.50
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ SG V P+ F E + + + ++ Y +PTP+Q PI +G++L+ A+
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQ 191
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 93.1 bits (221), Expect = 5e-18
Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI L++ PTRELA QI + F +R C +GGAP REQ +L+RG EI++ TPG
Sbjct: 670 GPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPG 729
Query: 435 RLIDFL---EKGTTNLQRCTYLVLDEAD 509
R+ID L + TNL+R TY+VLDEAD
Sbjct: 730 RMIDLLAANQGRVTNLKRVTYVVLDEAD 757
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQ+ KI +RPDRQT+++SAT P+ + L + +L
Sbjct: 758 RMFDMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKKVL 800
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V+G +V P+Q + + V +GY++PTPIQ Q P MSG++++GVAK
Sbjct: 585 IKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAK 642
Score = 38.7 bits (86), Expect = 0.12
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIR 246
++TGSGKT+A++LP HI +QPP++
Sbjct: 641 AKTGSGKTVAFLLPMFRHIKDQPPLK 666
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 92.7 bits (220), Expect = 7e-18
Identities = 50/87 (57%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC-VFGGAPKREQARDLERGVEIVIATP 431
GP+ALVLAPTRELA QI A F C +FGGA K EQ + L G EIV+ATP
Sbjct: 176 GPMALVLAPTRELATQIANEANAFNRAGVPARCCAIFGGASKHEQLKRLRAGAEIVVATP 235
Query: 432 GRLIDFLE-KGTTNLQRCTYLVLDEAD 509
GRLID L K + +L+R TYL LDEAD
Sbjct: 236 GRLIDVLHVKNSIDLRRVTYLALDEAD 262
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 175 TGSGKTLAYILPAIVHINNQPPIRRGE 255
TGSGKTLA++LPA I+ Q P+R+ E
Sbjct: 149 TGSGKTLAFLLPAYAQISRQRPLRKKE 175
Score = 36.7 bits (81), Expect = 0.50
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPD-YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
V V G E P++ F + D + + +K +GY+ PT IQAQ P+ G++ +G+A
Sbjct: 91 VRVDG-ETRAPVERFGQGGALDVHAIRALKRLGYETPTGIQAQCIPVICGGRDALGLA 147
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 92.3 bits (219), Expect = 1e-17
Identities = 47/89 (52%), Positives = 58/89 (65%)
Frame = +3
Query: 243 SER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 422
+E GP A+V+APTRELAQQI++ F H R T + GG EQ + +G EIVI
Sbjct: 385 NETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVI 444
Query: 423 ATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
ATPGRLID LE+ L +C Y+VLDEAD
Sbjct: 445 ATPGRLIDCLERRYAVLNQCNYVVLDEAD 473
Score = 42.3 bits (95), Expect = 0.010
Identities = 15/58 (25%), Positives = 35/58 (60%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
++ G + P++ +EE+ + + V+ GYK+P+PIQ P+ + ++++G+A+
Sbjct: 301 ISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAE 358
Score = 34.3 bits (75), Expect = 2.7
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPI 243
++TGSGKT A++LP + +I+ PP+
Sbjct: 357 AETGSGKTAAFVLPMLAYISRLPPM 381
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 91.9 bits (218), Expect = 1e-17
Identities = 47/89 (52%), Positives = 56/89 (62%)
Frame = +3
Query: 243 SER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 422
SE GPI LVL+PTRELA Q +VAA F ++ C++GG + Q L EIV
Sbjct: 154 SENDGPIVLVLSPTRELALQTDEVAAQFCVKMGYKHVCIYGGEDRHRQINKLRFHPEIVT 213
Query: 423 ATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
ATPGRLIDFL+ G N R +LVLDEAD
Sbjct: 214 ATPGRLIDFLQSGVFNPNRANFLVLDEAD 242
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIR II + DR+T M+SATWPKE+++LA L
Sbjct: 243 RMLDMGFEPQIRAIIASLTKDRETFMFSATWPKEIRQLASDFL 285
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
FEE N P + + +K + PTPIQ+ PI + G ++VG+AK
Sbjct: 87 FEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAK 130
Score = 33.1 bits (72), Expect = 6.2
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT ++++PA++HI+ Q I +
Sbjct: 129 AKTGSGKTASFLIPALMHISAQRKISEND 157
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 91.5 bits (217), Expect = 2e-17
Identities = 46/110 (41%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER-GVEIVIATP 431
GP+A+++ PTRELA Q+ Q A F + C +GG K EQ+ +L+ G E+V+ TP
Sbjct: 338 GPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTP 397
Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSE-KSLSKYAQTDR 578
GR+ID ++ G TN R T+LV DEAD ++D+ +++ KS+S + + DR
Sbjct: 398 GRIIDLVKMGATNFLRTTFLVFDEAD--RMFDMGFEAQVKSISDHVRPDR 445
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFE Q++ I + +RPDRQ LM+SAT+ ++V++LA L
Sbjct: 424 RMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARDAL 466
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK---- 175
V G++ P+ F +F + + ++ Y++PTPIQA P A+SG++++G+AK
Sbjct: 255 VGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSG 314
Query: 176 RVPAKRWP 199
+ A WP
Sbjct: 315 KTAAYLWP 322
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT AY+ PAIVHI +QP ++ GE
Sbjct: 309 AKTGSGKTAAYLWPAIVHIMDQPDLKAGE 337
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 91.5 bits (217), Expect = 2e-17
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI L+L+PTREL QI + A + +R ++GGA K Q R+L+ G EI++ATPG
Sbjct: 391 GPIMLILSPTRELCLQIAEEARPYSRLLNLRLVPIYGGASKFAQVRELQNGAEIMVATPG 450
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL++FL GT L R +Y V+DEAD
Sbjct: 451 RLLEFLSNGTIKLNRVSYFVMDEAD 475
Score = 79.4 bits (187), Expect = 7e-14
Identities = 39/60 (65%), Positives = 44/60 (73%)
Frame = +2
Query: 446 FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
FL G +L V F RMLDMGFEPQIRKI+ QIRPDRQTLM+SATWP E+K+LA
Sbjct: 455 FLSNGTIKLNRVSYFVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPSEIKRLA 514
Score = 48.0 bits (109), Expect = 2e-04
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
P+ F+EA F +Q +K + EPTPIQ GW ++G++++GV++
Sbjct: 317 PVTTFDEAVFNQQIQNIIKESNFTEPTPIQKVGWTSCLTGRDIIGVSQ 364
Score = 41.5 bits (93), Expect = 0.018
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRG 252
SQTGSGKTL ++LP ++H+ QPP+ G
Sbjct: 363 SQTGSGKTLTFLLPGLLHLLAQPPVGTG 390
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 91.1 bits (216), Expect = 2e-17
Identities = 47/88 (53%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPIA++LAPTRELA Q + A F ++ C +GG EQ DL+RG EIV+ TPG
Sbjct: 377 GPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPG 436
Query: 435 RLIDFLEKGT---TNLQRCTYLVLDEAD 509
R+ID L + TNL+R TYLVLDEAD
Sbjct: 437 RMIDVLAANSGKVTNLRRVTYLVLDEAD 464
Score = 56.8 bits (131), Expect = 4e-07
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM D GFEPQI K++ IRPD+QT+++SAT+P+ ++ LA +L
Sbjct: 465 RMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVL 507
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+TV G++ PI+ + + + +K Y +PT IQAQ P MSG++++G+AK
Sbjct: 292 ITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAK 349
Score = 37.9 bits (84), Expect = 0.22
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLA++LP HI +QP + G+
Sbjct: 348 AKTGSGKTLAFLLPMFRHILDQPELEEGD 376
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 91.1 bits (216), Expect = 2e-17
Identities = 45/94 (47%), Positives = 61/94 (64%)
Frame = +3
Query: 228 QPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 407
QP ER GP LVLAPTRELA QI++ A + ++ C++GG +R Q + G
Sbjct: 171 QPIPRGERGGPNVLVLAPTRELALQIEKEVAKYQFRG-IKAVCLYGGGDRRAQINVVRNG 229
Query: 408 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
VEI+IATPGRL D +++G ++ TYL+LDEAD
Sbjct: 230 VEILIATPGRLNDLVQEGVVDVSTITYLILDEAD 263
Score = 67.3 bits (157), Expect = 3e-10
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIRK++ +RPDRQT+M SATWP V++LA+ +
Sbjct: 264 RMLDMGFEPQIRKVLLDVRPDRQTVMTSATWPDGVRRLAQSYM 306
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/53 (37%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 VHNPIQYFEEA--NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ NP+ F +A +PD +++ ++ + PTPIQAQ WPI + G++L+G+A+
Sbjct: 100 IPNPVSEFHQAFGEYPDLMEE-LRKQKFTTPTPIQAQAWPILLRGEDLIGIAQ 151
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
+QTG+GKTLA++LPA++HI Q PI RGE
Sbjct: 150 AQTGTGKTLAFLLPALIHIEGQ-PIPRGE 177
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 91.1 bits (216), Expect = 2e-17
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Frame = +3
Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
L + H ++P S+ GPI L++ PTRELA QI + F +R C +GGA
Sbjct: 610 LPMFRHIRDQRPLKGSD--GPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAII 667
Query: 378 REQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEAD 509
++Q DL+RG EI++ TPGR+I+ L + TNLQR TY+VLDEAD
Sbjct: 668 KDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEAD 714
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQ+ K+ IRP+RQT+++SAT P+ + LA+ L
Sbjct: 715 RMFDMGFEPQVMKVFNNIRPNRQTILFSATMPRIMDALAKKTL 757
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V+G +V P+Q + + + +GY+ PT IQ Q P MSG++++GVAK
Sbjct: 542 IKVAGKDVPKPVQKWSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAK 599
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIR 246
++TGSGKT+A++LP HI +Q P++
Sbjct: 598 AKTGSGKTIAFLLPMFRHIRDQRPLK 623
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 90.6 bits (215), Expect = 3e-17
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P AL+L+PTREL+ QI + A F + + ++ +GGAP +Q R+LERGV+I++ATPGR
Sbjct: 197 PTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATPGR 256
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D +E+ +L+ YL LDEAD
Sbjct: 257 LVDMIERARVSLRMIKYLALDEAD 280
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/42 (61%), Positives = 34/42 (80%), Gaps = 4/42 (9%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI-RPD---RQTLMWSATWPKEVKKL 622
RMLDMGFEPQIRKI+EQ+ P RQT+++SAT+P E++ L
Sbjct: 281 RMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPNEIQIL 322
Score = 35.5 bits (78), Expect = 1.2
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 71 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTSCQP-LCT*TTNRLF- 244
+ Q ++ Y +PTPIQ PIAM+G++L+ A+ K C P +C N+L
Sbjct: 131 LNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKT-AAFCFPIICGILRNQLSR 189
Query: 245 GEVRSDC 265
G R C
Sbjct: 190 GGARLAC 196
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 90.6 bits (215), Expect = 3e-17
Identities = 49/107 (45%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Frame = +3
Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
L + H ++P SE GP+ +++ PTRELA QI + F +R CV+GGAP
Sbjct: 532 LPMFRHIKDQRPVEPSE--GPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPI 589
Query: 378 REQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEAD 509
EQ ++++ +IV+ATPGRLID L + TNL R TYLVLDEAD
Sbjct: 590 SEQIAEMKKTADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEAD 636
Score = 62.5 bits (145), Expect = 9e-09
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQ+ KI+ IRPDRQT+++SAT+PK+++ LA +L
Sbjct: 637 RMFDMGFEPQVMKILNNIRPDRQTVLFSATFPKQMESLARKVL 679
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+TV G + P+ + P +K +GY PTPIQ+Q P MSG++++GVAK
Sbjct: 464 ITVRGRDCPKPLTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAK 521
Score = 36.3 bits (80), Expect = 0.66
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT+A++LP HI +Q P+ E
Sbjct: 520 AKTGSGKTMAFLLPMFRHIKDQRPVEPSE 548
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 90.2 bits (214), Expect = 4e-17
Identities = 44/94 (46%), Positives = 62/94 (65%)
Frame = +3
Query: 228 QPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 407
QP + ER GP LVL PTRELA Q++ + + + +++ CV+GG ++EQ + + +G
Sbjct: 370 QPISREERNGPGMLVLTPTRELALQVEAECSKYSYKG-LKSVCVYGGGNRKEQIQHITKG 428
Query: 408 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
V+I+IATPGRL D NL+ TYLVLDEAD
Sbjct: 429 VDIIIATPGRLNDLQMNKCVNLRSITYLVLDEAD 462
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
+MLD+GFE QI KI+ +RPDRQT+M SATWP +++LA L E
Sbjct: 463 KMLDLGFEGQITKILLDVRPDRQTVMTSATWPHTIRQLARSYLKE 507
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 VHNPIQYFEEA--NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ NP FE+A ++P+ V + +K G++ PTPIQ+Q WPI + G +L+GVA+
Sbjct: 299 IPNPTCKFEDAFEHYPE-VLKSIKKAGFQRPTPIQSQAWPIVLQGMDLIGVAQ 350
Score = 37.9 bits (84), Expect = 0.22
Identities = 12/23 (52%), Positives = 21/23 (91%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQP 237
+QTG+GKTL+Y++P +H+++QP
Sbjct: 349 AQTGTGKTLSYLIPGFIHLDSQP 371
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 89.8 bits (213), Expect = 5e-17
Identities = 45/104 (43%), Positives = 61/104 (58%)
Frame = +3
Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
LH+ + A + ++ P LVL+PTRELAQQI+ + + Y ++ C++GG +
Sbjct: 144 LHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSR 202
Query: 378 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
EQ GVEIVIATPGRL D G +L TY+VLDEAD
Sbjct: 203 PEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEAD 246
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
RMLDMGFE IR+I+ +IRPDR + SATWP+ V+KL +
Sbjct: 247 RMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGVRKLTD 286
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV++
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQ 129
Score = 39.1 bits (87), Expect = 0.094
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQ 234
SQTGSGKTLA++LPA++HI+ Q
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQ 149
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 89.8 bits (213), Expect = 5e-17
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P A+++ PTREL QI A F ++ VR V+GG QAR+LE+G +V+ TPGR
Sbjct: 350 PAAIIVGPTRELVNQIYLEARKFASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGTPGR 409
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+DF+ KG NL + YL+LDEAD
Sbjct: 410 LLDFIGKGKINLSKVKYLILDEAD 433
Score = 56.4 bits (130), Expect = 6e-07
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Frame = +2
Query: 446 FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEV 613
F+GKG L+ V RMLDMGFEP+IRK++ + RQTLM+SAT+ E+
Sbjct: 413 FIGKGKINLSKVKYLILDEADRMLDMGFEPEIRKLVTTFDMPEKGQRQTLMFSATFAAEI 472
Query: 614 KKLAEGLLGETTFRSI 661
++LA+ L E F ++
Sbjct: 473 QQLAKEFLSEYVFVTV 488
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 VTVSGVEV-HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V VSG N I F++A+ + V+ V+ Y PTPIQ PI +SGK+L+G A+
Sbjct: 257 VEVSGTNAPKNGILNFDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGKDLMGCAQ 315
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 89.8 bits (213), Expect = 5e-17
Identities = 43/98 (43%), Positives = 61/98 (62%)
Frame = +3
Query: 216 CAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 395
C YS+ P L+LAPTRELA QI + F + +R+ V+GGA Q R+
Sbjct: 248 CQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIRE 307
Query: 396 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
++ G +++ATPGRL+DF+EK +L+ C Y+VLDEAD
Sbjct: 308 VQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEAD 345
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRP----DRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGFEPQIRKIIE+ +RQTLM+SAT+PKE++KLA L F ++
Sbjct: 346 RMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTV 400
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 89.4 bits (212), Expect = 7e-17
Identities = 50/105 (47%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +3
Query: 198 LHLASHCAHKQPTAY-SER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 374
L + S+ P Y + + GP ALV+AP+RELA QI + F R V GG
Sbjct: 754 LPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGRN 813
Query: 375 KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
QA +L RGVEIVI TPGRL D LEK T L +C Y++LDEAD
Sbjct: 814 AEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEAD 858
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ + G V PI+ +EE+N + + + +K Y++PTPIQ Q PIA+ ++L+G+A+
Sbjct: 686 IYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAE 743
Score = 33.1 bits (72), Expect = 6.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPI 243
++TGSGKT A++LP + ++ PP+
Sbjct: 742 AETGSGKTAAFVLPMLSYVKQLPPL 766
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 89.4 bits (212), Expect = 7e-17
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P + L PTRELA QI + F + ++ TCVFGGAP EQ R+L RG++IVIATPGR
Sbjct: 192 PSCVALCPTRELAIQIFEETRKFCKGTDLKTTCVFGGAPITEQIRNLSRGIDIVIATPGR 251
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
LID L++ L +L+LDEAD
Sbjct: 252 LIDILKQHCITLSEVRFLILDEAD 275
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 4/47 (8%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIE--QIRP--DRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQ++++I + P DRQT+++SAT+P V+ LA +
Sbjct: 276 RMLDMGFEPQMQEVINGWDMPPADDRQTMLFSATFPDAVRNLARDFM 322
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 89.0 bits (211), Expect = 9e-17
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI ++ APTRELA QI A F +R + V+GG K EQ ++L+ G EIV+ATPG
Sbjct: 301 GPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPG 360
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLID L+ + R +YLVLDEAD
Sbjct: 361 RLIDMLKMKALTMMRASYLVLDEAD 385
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/45 (62%), Positives = 37/45 (82%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RM D+GFEPQ+R I+ QIRPDRQTL++SAT P +V+KLA +L +
Sbjct: 386 RMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSD 430
Score = 62.5 bits (145), Expect = 9e-09
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ VSG +VH P++ FE+ F + +K Y++PT IQ Q PI +SG++++G+AK
Sbjct: 216 IRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAK 273
Score = 41.9 bits (94), Expect = 0.013
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT A++LP IVHI +QP ++R E
Sbjct: 272 AKTGSGKTAAFVLPMIVHIMDQPELQRDE 300
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 88.6 bits (210), Expect = 1e-16
Identities = 44/123 (35%), Positives = 69/123 (56%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 446
L+L PTREL Q+ F +++ V+GG PK Q +L++G +I++ATPGRL+D
Sbjct: 205 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLD 264
Query: 447 FLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK*RNLL 626
FLE G NL +C Y+V+DEAD + K +++ + +L P++ R L
Sbjct: 265 FLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATWPEQVRKLA 324
Query: 627 RDY 635
D+
Sbjct: 325 YDF 327
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 23 VHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+HN I F + F + + + + EPT IQ WPIA+SGK+L+GVA+
Sbjct: 57 IHNIINKFSDVCFHESILNYLNNK-FSEPTAIQKITWPIALSGKDLIGVAE 106
Score = 33.1 bits (72), Expect = 6.2
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHI 225
++TGSGKTLA++LP +HI
Sbjct: 105 AETGSGKTLAFVLPCFMHI 123
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
G IAL+++PTRELA QI F +R CV+GGA EQ +L+RG +IV+ TPG
Sbjct: 582 GMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPG 641
Query: 435 RLIDFL---EKGTTNLQRCTYLVLDEAD 509
R+ID L + TNL+R T+LVLDEAD
Sbjct: 642 RMIDILCANNRRITNLRRVTFLVLDEAD 669
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RM DMGF PQI I++ IRPDRQT+M+SAT+P +V+ +A+ +L +
Sbjct: 670 RMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNK 714
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V ++G + PIQ + +A + V +K Y++PT IQAQ P M+G++L+G+A+
Sbjct: 497 VKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIAR 554
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLA++LP HI QP GE
Sbjct: 553 ARTGSGKTLAFLLPMFRHILAQPKSAPGE 581
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 446
L+L PTREL Q+ F ++R+ V+GG PK Q +L++G +IV+ATPGRL+D
Sbjct: 405 LILLPTRELCMQVVDEIKAFEKELHIRSVAVYGGVPKYTQISNLKKGADIVVATPGRLLD 464
Query: 447 FLEKGTTNLQRCTYLVLDEAD 509
LE G +L RC Y+V+DEAD
Sbjct: 465 LLESGVIHLLRCIYVVIDEAD 485
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/39 (53%), Positives = 33/39 (84%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
R+LDMGFE Q++KI+ Q+ ++Q L ++ATWP++V+KLA
Sbjct: 486 RLLDMGFEKQLKKIMTQVNRNKQLLFFTATWPEQVRKLA 524
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 23 VHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
++N F E NF + V + +KEPT IQ WPIA+SGK+L+GVA+
Sbjct: 273 LNNLASSFSEVNFHEAVVNHLNAK-FKEPTAIQKVTWPIALSGKDLIGVAE 322
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLA+ LPA++HI Q R GE
Sbjct: 321 AETGSGKTLAFALPALMHILKQ---REGE 346
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 87.8 bits (208), Expect = 2e-16
Identities = 39/84 (46%), Positives = 57/84 (67%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+AL+LAPTREL QQI + A F + +R+ CV+GG+ Q +++ +G +I++ATPGR
Sbjct: 213 PVALILAPTRELGQQIYEEAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGR 272
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+ F EK +L YL+ DEAD
Sbjct: 273 LLYFTEKKIVSLSSVRYLIFDEAD 296
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIE--QIRP--DRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGFEPQIR+I E ++ P RQTLM+SAT+PK++++LA L + F ++
Sbjct: 297 RMLDMGFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRLAADFLDDYVFITV 351
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRR 249
+QTGSGKT A++ P I I PP+ R
Sbjct: 175 AQTGSGKTAAFLFPIISDILKNPPMPR 201
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP LV+APTRELA QI Q A + + ++GGAP+R Q L R +IV+ TPG
Sbjct: 212 GPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQLQLSRRPKIVVGTPG 271
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
R+IDF+E G +L+ ++LV+DEAD
Sbjct: 272 RIIDFMESGDLSLKNISFLVVDEAD 296
Score = 59.3 bits (137), Expect = 8e-08
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
R+++MGFE QI I IRPDRQ L WSATWPK+V AE
Sbjct: 297 RLMEMGFEQQIDGIFNSIRPDRQVLYWSATWPKKVSSFAE 336
Score = 43.6 bits (98), Expect = 0.004
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
PI E F ++ + +++PTP+Q+ GWPIA+SG +++G++K
Sbjct: 138 PIDTIESVPFQSTIKNFLSKK-FEKPTPVQSLGWPIALSGSDMLGISK 184
Score = 37.9 bits (84), Expect = 0.22
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQP 237
S+TGSGKTL++ILPAI HI QP
Sbjct: 183 SKTGSGKTLSFILPAIEHILAQP 205
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ LVLAPTRELA QI + A F + S +R ++GG EQ R+L+RG +++ATPGR
Sbjct: 351 PLGLVLAPTRELATQIYEEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGR 410
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D + +G L+ +LVLDEAD
Sbjct: 411 LDDIINRGKIGLENLRFLVLDEAD 434
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIE--QIRP--DRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGFEPQIR IIE + P RQTLM+SAT+PK +++LA L F ++
Sbjct: 435 RMLDMGFEPQIRHIIENRDMPPTGQRQTLMFSATFPKNIQELASDFLSNYIFLAV 489
Score = 40.3 bits (90), Expect = 0.041
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V +G +V I F++ + ++ +K Y +PTP+Q PI +SG++L+ A+
Sbjct: 255 VEATGQQVPEHITSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLMSCAQ 312
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/94 (46%), Positives = 60/94 (63%)
Frame = +3
Query: 228 QPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 407
QP+ +R P LVL PTRELA Q++ + + +R+ CV+GG + EQ +L++G
Sbjct: 307 QPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-LRSVCVYGGGNRDEQIEELKKG 365
Query: 408 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
V+I+IATPGRL D NL+ TYLVLDEAD
Sbjct: 366 VDIIIATPGRLNDLQMSNFVNLKNITYLVLDEAD 399
Score = 65.7 bits (153), Expect = 9e-10
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
+MLDMGFEPQI KI+ +RPDRQT+M SATWP V +LA+ L E
Sbjct: 400 KMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKE 444
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/53 (41%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 VHNPIQYFEEAN--FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ NP F++A +P+ V + +K G+++PTPIQ+Q WPI + G +L+GVA+
Sbjct: 236 IPNPTCTFDDAFQCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQ 287
Score = 35.5 bits (78), Expect = 1.2
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIR 246
+QTG+GKTL Y++P +H+ QP ++
Sbjct: 286 AQTGTGKTLCYLMPGFIHLVLQPSLK 311
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 87.4 bits (207), Expect = 3e-16
Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Frame = +3
Query: 225 KQP--TAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 398
KQP T +E GP ALV+APTREL QQI++ +F R + GG +QA +
Sbjct: 477 KQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQV 536
Query: 399 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADV 512
+G EI+IATPGRL D LEK L +C Y+VLDEAD+
Sbjct: 537 SKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADM 574
Score = 54.8 bits (126), Expect = 2e-06
Identities = 19/58 (32%), Positives = 42/58 (72%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
++ G NPI+ ++E+N P + + ++ +GY++P+PIQ Q PI+++G++++G+A+
Sbjct: 401 ISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAE 458
Score = 34.7 bits (76), Expect = 2.0
Identities = 11/27 (40%), Positives = 22/27 (81%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRR 249
++TGSGKT A+++P +++I+ QP + +
Sbjct: 457 AETGSGKTCAFVIPMLIYISKQPRLTK 483
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ LVLAPTRELA QI + A F + S +R ++GG EQ R+L+RG +++ATPGR
Sbjct: 379 PLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGR 438
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D + +G L+ +LVLDEAD
Sbjct: 439 LEDMITRGKVGLENIRFLVLDEAD 462
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIR----PDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGFEPQIR+I+EQ+ RQTLM+SAT+PK++++LA L F ++
Sbjct: 463 RMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAV 517
Score = 36.3 bits (80), Expect = 0.66
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V +G V I F++ + ++ V Y +PTP+Q PI ++G++L+ A+
Sbjct: 283 VEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQ 340
>UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10,
partial; n=1; Danio rerio|Rep: PREDICTED: similar to
Pl10, partial - Danio rerio
Length = 245
Score = 86.6 bits (205), Expect = 5e-16
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
PI+LVLAPTRELA QI A F + S+VR V+GGA +Q RDLERG +++ATPGR
Sbjct: 171 PISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 230
Query: 438 LIDFLEKGTTNLQRC 482
L+D +E+G L C
Sbjct: 231 LVDMMERGKIGLDYC 245
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 86.6 bits (205), Expect = 5e-16
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
G IA+++APTREL QI + F + +R CV+GG EQ +L+RG EI++ TPG
Sbjct: 583 GAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 642
Query: 435 RLIDFLEKGT---TNLQRCTYLVLDEAD 509
R+ID L + TNL+R TY+VLDEAD
Sbjct: 643 RMIDMLAANSGRVTNLRRVTYVVLDEAD 670
Score = 62.5 bits (145), Expect = 9e-09
Identities = 25/43 (58%), Positives = 37/43 (86%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQ+ +II+ +RPDRQT+M+SAT+P++++ LA +L
Sbjct: 671 RMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRIL 713
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V G PI+ + + + ++ +G+++PTPIQ Q P MSG++L+G+AK
Sbjct: 498 IQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAK 555
Score = 37.5 bits (83), Expect = 0.29
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLA+ILP HI +QP + G+
Sbjct: 554 AKTGSGKTLAFILPMFRHILDQPSMEDGD 582
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 86.6 bits (205), Expect = 5e-16
Identities = 42/94 (44%), Positives = 57/94 (60%)
Frame = +3
Query: 228 QPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 407
Q + +SE+ P A+V+ PTREL QI A F + VR +GG Q RDL+RG
Sbjct: 381 QSSQFSEKQTPRAIVVGPTRELIYQIFLEARKFSRGTVVRPVVAYGGTSMNHQIRDLQRG 440
Query: 408 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
I+IATPGRL+DF+ +G L +++LDEAD
Sbjct: 441 CHILIATPGRLMDFINRGLVGLDHVEFVILDEAD 474
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQ----IRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RMLDMGFE +IRK+ + DR TLM+SAT+P E+++LA L E
Sbjct: 475 RMLDMGFETEIRKLASSPGMPSKSDRHTLMFSATFPDEIQRLAHDFLRE 523
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V VSGV I FE A P+ V VK Y+ PTP+Q PI + ++L+ A+
Sbjct: 301 VEVSGVNAPKSIPTFEVAGLPETVLANVKRANYERPTPVQKYSIPIINADRDLMACAQ 358
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 86.6 bits (205), Expect = 5e-16
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPG 434
P ALVL+PTRELA QI + A F + S ++ ++GG R+Q L G I+IATPG
Sbjct: 223 PCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPG 282
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLID +E+G L C YLVLDEAD
Sbjct: 283 RLIDIIEQGFIGLAGCRYLVLDEAD 307
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPD---RQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIRKI+ Q P R T M+SAT+PKE++ LA+ L
Sbjct: 308 RMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFL 353
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A+
Sbjct: 127 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQ 184
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 86.2 bits (204), Expect = 6e-16
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +3
Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
L L H + P + GPI L++ PTRELA QI + F + + C FGG+
Sbjct: 373 LPLLRHIQDQPPLRRGD--GPIGLIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSI 430
Query: 378 REQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEAD 509
Q +L++G +I++ TPGR+ID L + TNLQR TYLVLDEAD
Sbjct: 431 ESQIAELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEAD 477
Score = 59.3 bits (137), Expect = 8e-08
Identities = 23/43 (53%), Positives = 37/43 (86%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQ+ K+ ++RPDRQT+++SAT+P++++ LA+ +L
Sbjct: 478 RMFDMGFEPQVTKVFTRVRPDRQTVLFSATFPRKMELLAKKIL 520
Score = 46.4 bits (105), Expect = 6e-04
Identities = 17/29 (58%), Positives = 26/29 (89%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL+++LP + HI +QPP+RRG+
Sbjct: 361 AKTGSGKTLSFVLPLLRHIQDQPPLRRGD 389
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVK-TMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V GV PI + + P + ++ + Y P+ IQAQ P MSG++++GVAK
Sbjct: 304 IRVRGVNCTRPIIRWSQLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAK 362
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 85.8 bits (203), Expect = 8e-16
Identities = 39/84 (46%), Positives = 58/84 (69%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ALVL+PTRELA Q + + F + +R ++GG+ R Q DL+RG +I++ATPGR
Sbjct: 285 PVALVLSPTRELAIQTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLDRGSDIIVATPGR 344
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D +++G NL+ +L+LDEAD
Sbjct: 345 LRDLIDRGKVNLKLIKFLILDEAD 368
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIR-----PDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGF PQIR+I+E RQT+M+SAT+P+E+++LA+ L F ++
Sbjct: 369 RMLDMGFAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTV 424
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 85.8 bits (203), Expect = 8e-16
Identities = 40/92 (43%), Positives = 58/92 (63%)
Frame = +3
Query: 234 TAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 413
++Y E P A+V+ PTRELA QI + A F + + ++ V+GG R Q+ ++ G
Sbjct: 374 SSYDETQTPEAVVMCPTRELAIQIFKEAVKFSYDTIIKPVVVYGGVAPRYQSDKVKSGCN 433
Query: 414 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
I++ TPGRLIDF+ +G N C +LVLDEAD
Sbjct: 434 ILVGTPGRLIDFMNRGVFNFSACKFLVLDEAD 465
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQ----IRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGF +++K++ ++ +R TLM+SAT+P EV++LA L F ++
Sbjct: 466 RMLDMGFMGEVKKVVYHGTMPVKVERNTLMFSATFPNEVQELAAEFLENYIFVTV 520
Score = 35.9 bits (79), Expect = 0.88
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V+G + + I F+ A + +K GY +PTP+Q P+ M ++L+ A+
Sbjct: 294 VTGEGLPSGIDSFDAAGLRPKILDNIKKSGYTQPTPVQKWAIPVIMKKRDLMACAQ 349
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 85.4 bits (202), Expect = 1e-15
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +3
Query: 204 LASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 383
L H ++P + E GPI +V AP RELA+QI FG +R+ VFGG
Sbjct: 198 LIKHVMAQRPLSKGE--GPIGIVFAPIRELAEQINTEINKFGKYLNIRSVAVFGGTGISN 255
Query: 384 QARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEAD 509
Q L+RG EIV+ TPGR+ID L TNL+R T++VLDEAD
Sbjct: 256 QIGALKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTFVVLDEAD 300
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGF PQI++IIE IRPD+Q +M+SAT+P V++ A L
Sbjct: 301 RMFDMGFGPQIKRIIEGIRPDKQIVMFSATFPISVEQHAREFL 343
Score = 39.5 bits (88), Expect = 0.071
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLAY +P I H+ Q P+ +GE
Sbjct: 184 AKTGSGKTLAYTIPLIKHVMAQRPLSKGE 212
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V G PI+ + E +K + Y++P+P+Q Q P+ MSG + + AK
Sbjct: 130 VKGKNCPKPIRTWSECGINPITMDVIKALKYEKPSPVQRQAIPVIMSGYDAIVCAK 185
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LVL+PTRELA QI++ F T ++ C +GG+ Q +L+RGV +++ATPG
Sbjct: 461 GPIGLVLSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPG 520
Query: 435 RLIDFLEKG---TTNLQRCTYLVLDEAD 509
RLID L T L+R T++VLDEAD
Sbjct: 521 RLIDLLAANGGRITTLRRTTFVVLDEAD 548
Score = 62.5 bits (145), Expect = 9e-09
Identities = 26/43 (60%), Positives = 39/43 (90%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQI+KI QIRPD+QT+++SAT+P+++++LA+ +L
Sbjct: 549 RMFDMGFEPQIQKIFTQIRPDKQTVLFSATFPRKLEQLAKKVL 591
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKT-MGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V G V P + + P+ V ++ +G+ +P+PIQ Q PI +SG++++GVAK
Sbjct: 375 VRARGKNVPPPFLTWGQLLMPESVMSVIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAK 433
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL+Y+LP + HI +Q + GE
Sbjct: 432 AKTGSGKTLSYVLPMVRHIQDQLFPKPGE 460
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP A+VLAPTRELAQQIQ F R V GG EQ+ + +G IV+ATPG
Sbjct: 325 GPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPG 384
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D LE+ L +CTY+V+DEAD
Sbjct: 385 RLLDCLERRLFVLSQCTYVVMDEAD 409
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/58 (32%), Positives = 38/58 (65%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+++ G ++ NP++ +EEA P + + +K + YKEP+ IQ P+ + K+L+G+A+
Sbjct: 237 ISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAE 294
Score = 36.3 bits (80), Expect = 0.66
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGEVRL 264
++TGSGKT A+I+P I+ I+ PP+ + L
Sbjct: 293 AETGSGKTAAFIIPLIIAISKLPPLTESNMHL 324
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 85.0 bits (201), Expect = 1e-15
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
G ALVLAPTRELA QI + FGH VR + GG +QA L + EIVIATPG
Sbjct: 71 GTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKREIVIATPG 130
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D LE+G L LVLDEAD
Sbjct: 131 RLVDHLEQGNARLDGIEALVLDEAD 155
Score = 54.0 bits (124), Expect = 3e-06
Identities = 51/198 (25%), Positives = 84/198 (42%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTSCQPLCT 223
F E + ++ G++ PTPIQAQ P A++GK+++G A K PL
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKT-AAFLLPLI- 63
Query: 224 *TTNRLFGEVRSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLGE 403
+RL G+ + L + ++ RF V + + + L +
Sbjct: 64 ---DRLAGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQ 120
Query: 404 GSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTL 583
+ L +G+ +L + RMLDMGF+PQ+ +I+ ++ RQTL
Sbjct: 121 KREIVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTL 180
Query: 584 MWSATWPKEVKKLAEGLL 637
++SAT EV A L
Sbjct: 181 LFSATMAGEVADFARAHL 198
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 85.0 bits (201), Expect = 1e-15
Identities = 43/91 (47%), Positives = 54/91 (59%)
Frame = +3
Query: 237 AYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 416
A+ E P LV+ PTRELA QI + A F H+S + +GGA Q + + G I
Sbjct: 332 AFEEPAQPTGLVICPTRELAIQIMREARKFSHSSVAKCCVAYGGAAGFHQLKTIHSGCHI 391
Query: 417 VIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
++ATPGRL+DFLEKG YLVLDEAD
Sbjct: 392 LVATPGRLLDFLEKGKIVFSSLKYLVLDEAD 422
Score = 40.3 bits (90), Expect = 0.041
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQ--IRP--DRQTLMWSATWPKEVKKLAEGLLGETTF 652
RMLDMGF I+ +I + P +R TLM+SAT+P E+++LA L F
Sbjct: 423 RMLDMGFLSSIKTVINHKTMTPTAERITLMFSATFPHEIQELASAFLNNYLF 474
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 8 VSGVEVHNPI-QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
VSG E P + F+ N + + + GY PTP+Q P M+G++++ A+
Sbjct: 250 VSGAEPIQPAAESFQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNGRDIMACAQ 306
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 85.0 bits (201), Expect = 1e-15
Identities = 43/84 (51%), Positives = 54/84 (64%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+AL+LAPTRELA QI A F + S VR V+GG R Q +D+ +G +++ATPGR
Sbjct: 292 PVALILAPTRELAVQIYDEARKFSYRSLVRPCVVYGGRDIRGQLQDISQGCNMLVATPGR 351
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D LE+ L YLVLDEAD
Sbjct: 352 LSDMLERCKIGLDCIRYLVLDEAD 375
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 4/52 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIR----PDRQTLMWSATWPKEVKKLAEGLLGETTF 652
RMLDMGFEPQIRKI+EQ RQTLM+SAT+P+E++ LA L + F
Sbjct: 376 RMLDMGFEPQIRKIVEQTNMPPPGQRQTLMFSATFPREIQMLASDFLKDYLF 427
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 85.0 bits (201), Expect = 1e-15
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Frame = +3
Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
L + H ++P + SE GPIA+V++PTRELA QI + F +R +C GG+
Sbjct: 459 LPMLRHVRDQRPVSGSE--GPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSI 516
Query: 378 REQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEAD 509
E +++G E+VI TPGR+ID L TN++R TY+V+DEAD
Sbjct: 517 SEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEAD 563
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQ+ KII +RP Q +++SAT+PK ++ LA +L
Sbjct: 564 RMFDMGFEPQVMKIINNVRPSAQKVLFSATFPKTMESLARRIL 606
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ + G + P++ + P +K G++ PT IQAQ P MSG++++G+AK
Sbjct: 391 IKIRGQDAPKPVRNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAK 448
Score = 35.9 bits (79), Expect = 0.88
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT+A++LP + H+ +Q P+ E
Sbjct: 447 AKTGSGKTVAFLLPMLRHVRDQRPVSGSE 475
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 431
GP LVL PTRELA Q+++ A +G R C+ GGAP Q + L + V++V+ATP
Sbjct: 73 GPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLKRLSQPVDVVVATP 132
Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
GRLID LE+G + R LVLDEAD
Sbjct: 133 GRLIDHLERGKIDFSRLEVLVLDEAD 158
Score = 36.3 bits (80), Expect = 0.66
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGL 634
RMLDMGF I+ I + +RQTL++SAT V LA L
Sbjct: 159 RMLDMGFVDDIKAIAARCPAERQTLLFSATLDGVVGNLAREL 200
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 84.6 bits (200), Expect = 2e-15
Identities = 48/91 (52%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 ER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 425
E G I LV+APTREL QI ++ F ++ ++GGA EQ L+RG EIVI
Sbjct: 438 ENDGMIVLVIAPTRELVIQISNESSKFSRAVGLKTLAIYGGAGIGEQLNALKRGAEIVIG 497
Query: 426 TPGRLIDF--LEKG-TTNLQRCTYLVLDEAD 509
TPGRLID L KG TNL+R T+LVLDEAD
Sbjct: 498 TPGRLIDVLTLSKGKVTNLRRVTFLVLDEAD 528
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RM DMGF PQI I+ IRPDRQT ++SAT+P ++ LA+ +L +
Sbjct: 529 RMFDMGFAPQISAIVGNIRPDRQTALFSATFPIMIENLAKKILAK 573
Score = 41.1 bits (92), Expect = 0.023
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V G + PI F + PD + + ++ Y+ P PIQ Q P M G++++G+A+
Sbjct: 356 IRVYGKKCPRPISSFSQCGLPDPILKILEKREYERPFPIQMQCIPALMCGRDVIGIAE 413
Score = 39.5 bits (88), Expect = 0.071
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLA++LPAI H +QP +R +
Sbjct: 412 AETGSGKTLAFLLPAIRHALDQPSLREND 440
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 84.2 bits (199), Expect = 3e-15
Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Frame = +3
Query: 228 QPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSY-VRNTCVFGGAPKREQARDLER 404
Q T GP+ L+LAPTRELA QI + F +R C GG+ ++Q DL+R
Sbjct: 342 QRTLSKNETGPLGLILAPTRELALQINEEVEKFTKQDRSIRTICCTGGSEMKKQINDLKR 401
Query: 405 GVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEAD 509
GVEIV+ATPGRLID L + L +R T++V+DEAD
Sbjct: 402 GVEIVVATPGRLIDILTLNSGKLISTKRITFVVMDEAD 439
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/43 (46%), Positives = 34/43 (79%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
R+ DMGFEPQI +I++ +RPD+Q +++SAT+P +++ A +L
Sbjct: 440 RLFDMGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAARIL 482
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFP-DYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V G I + + P D + K + Y EPT IQ+Q P MSG++L+G++K
Sbjct: 264 IKVKGKHCPKLITRWSQLGLPTDIMNLITKELKYDEPTAIQSQAIPAIMSGRDLIGISK 322
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
S+TGSGKT++YILP + I Q + + E
Sbjct: 321 SKTGSGKTISYILPMLRQIKAQRTLSKNE 349
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 84.2 bits (199), Expect = 3e-15
Identities = 45/88 (51%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LV+APTREL QQI F +R V+GG+ +Q +L+RG EIV+ TPG
Sbjct: 602 GPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPG 661
Query: 435 RLIDFL--EKG-TTNLQRCTYLVLDEAD 509
R+ID L G TNL+R T+LV+DEAD
Sbjct: 662 RMIDILCTSSGKITNLRRVTFLVMDEAD 689
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/45 (57%), Positives = 38/45 (84%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RM DMGFEPQI +II+ IRP+RQT+++SAT+P++V+ LA +L +
Sbjct: 690 RMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNK 734
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V G +V PI+++ + + +K + Y++P PIQ Q PI MSG++ +GVAK
Sbjct: 519 VHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAK 574
Score = 41.9 bits (94), Expect = 0.013
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL ++LP + HI +QPP+ G+
Sbjct: 573 AKTGSGKTLGFVLPMLRHIKDQPPVEAGD 601
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 83.8 bits (198), Expect = 3e-15
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVLAPTRELA Q+ ++G +R V+GG P Q + L+RG +I++ATPGRL+
Sbjct: 79 ALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVATPGRLL 138
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D L + +L++ YLVLDEAD
Sbjct: 139 DLLRQKAISLEKLEYLVLDEAD 160
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETT 649
RMLD+GF I+KI++ DRQTL+++AT + V+ LAE L T
Sbjct: 161 RMLDLGFIDPIQKIMDYAADDRQTLLFTATADESVEVLAEFYLNNPT 207
Score = 36.7 bits (81), Expect = 0.50
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F E +Q +K +GY++PTPIQ+Q P+ + G +L+ A+
Sbjct: 6 FAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQ 49
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 83.8 bits (198), Expect = 3e-15
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ LV+APTRELAQQI++V + +R C +GG K +Q+R L GV+IVI TPGR
Sbjct: 185 PLVLVMAPTRELAQQIEEVCKTSIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGR 244
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D L K +L YLVLDEAD
Sbjct: 245 LNDLLRK--HHLSSVQYLVLDEAD 266
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/43 (69%), Positives = 34/43 (79%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF PQI +I+QI +RQTLM+SATWPKEVK LA L
Sbjct: 267 RMLDMGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLASKFL 309
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
V + G NP Q F + FP Q + G+ PT IQ Q WPI + G +LVG+A
Sbjct: 100 VLIEGKSQPNPFQKFTDYEFPRMFQHIFQ--GFTAPTVIQGQSWPIILGGNDLVGLA 154
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 83.8 bits (198), Expect = 3e-15
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Frame = +3
Query: 198 LHLASHCAHKQPTAY-SER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 374
L + ++ P Y + + GP AL++AP+RELA QI F R V GG
Sbjct: 637 LPMLAYVKQLPPLTYETSQDGPYALIIAPSRELAIQIFDETNKFASYCSCRTVAVVGGRN 696
Query: 375 KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
QA +L +GVEI+I TPGR+ D LEK T L +C Y++LDEAD
Sbjct: 697 AEAQAFELRKGVEIIIGTPGRIHDCLEKAYTVLNQCNYVILDEAD 741
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ + G V PI+ +EE+N + + +K Y++PTPIQ Q PIA+ ++L+G+A+
Sbjct: 569 IYIKGGIVPPPIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAE 626
Score = 33.9 bits (74), Expect = 3.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPI 243
++TGSGKT A++LP + ++ PP+
Sbjct: 625 AETGSGKTAAFVLPMLAYVKQLPPL 649
>UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11;
Pezizomycotina|Rep: DEAD-box protein 3 - Aspergillus
terreus (strain NIH 2624)
Length = 590
Score = 83.8 bits (198), Expect = 3e-15
Identities = 40/85 (47%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ LV+APTREL+ QI A + S +R V+GGAP R+Q +L++G +I+I TPGR
Sbjct: 214 PLVLVVAPTRELSMQIFDEARRLCYRSMLRPCVVYGGAPVRDQREELQKGCDILIGTPGR 273
Query: 438 LIDFLEK-GTTNLQRCTYLVLDEAD 509
L+DF++K +L+R Y ++DEAD
Sbjct: 274 LLDFMDKPHILSLRRVRYTIIDEAD 298
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 151
V E NP++ F++A +++ ++ Y PTPIQA P ++G
Sbjct: 121 VVAESRERPNPVKNFDDAGLHPIMRENIRLCRYNVPTPIQAYAIPAILTG 170
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 83.8 bits (198), Expect = 3e-15
Identities = 40/85 (47%), Positives = 54/85 (63%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP A++LAPTRELAQQI+ A F + + GG EQ+ L G EI+IATPG
Sbjct: 455 GPYAIILAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPG 514
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D +E+ L +C Y+++DEAD
Sbjct: 515 RLVDCIERRILVLSQCCYVIMDEAD 539
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/57 (33%), Positives = 36/57 (63%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
++ G + NP++ + E+ P + + + +GYK+P+PIQ PIA+ ++L+GVA
Sbjct: 365 ISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLIGVA 421
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 83.4 bits (197), Expect = 4e-15
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = +3
Query: 228 QPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 407
QP R GP LVL PTRELA Q+ +++ + +++ C++GG + Q +DL +G
Sbjct: 306 QPVLQRARNGPGMLVLTPTRELALQVDAECSEYSYRG-LKSVCIYGGGDRDGQIKDLSKG 364
Query: 408 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+I+IATPGRL D L+ TYLVLDEAD
Sbjct: 365 ADIIIATPGRLHDLQMNNFVYLKSITYLVLDEAD 398
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +2
Query: 29 NPIQYFEEAN--FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
NP FE+A +P+ V + ++ G+++PTPIQ+Q WPI + G +L+GVA+
Sbjct: 237 NPTCNFEDAFHCYPE-VMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQ 286
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
+MLDMGFEPQI KI+ +RPDRQT+M S K V+ + + FRS+
Sbjct: 399 KMLDMGFEPQIMKILLDVRPDRQTVMTSLPVCK-VEPVEQNSFDFRAFRSV 448
Score = 41.1 bits (92), Expect = 0.023
Identities = 14/27 (51%), Positives = 24/27 (88%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRR 249
+QTG+GKTL+Y++P +HI++QP ++R
Sbjct: 285 AQTGTGKTLSYLMPGFIHIDSQPVLQR 311
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 83.4 bits (197), Expect = 4e-15
Identities = 43/85 (50%), Positives = 53/85 (62%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP AL+L PTRELAQQI+ F +R + GG +QA L G EIVIATPG
Sbjct: 343 GPQALILVPTRELAQQIETETNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAEIVIATPG 402
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL D +E+ L +CTY+V+DEAD
Sbjct: 403 RLKDCIERHVLVLSQCTYVVMDEAD 427
Score = 49.6 bits (113), Expect = 7e-05
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
++ G + P++ + E+ P + ++ +GYKEP+PIQ Q PI + ++L+G+A+
Sbjct: 255 ISARGGNIPKPLRSWRESGIPASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLIGIAE 312
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 83.4 bits (197), Expect = 4e-15
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
A +LAPTRELAQQI++ G VR+TC+ GG +QARDL R I+IATPGRL+
Sbjct: 152 ACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLM 211
Query: 444 DFLE--KGTTNLQRCTYLVLDEAD 509
D LE KG +L++ +LV+DEAD
Sbjct: 212 DHLENTKG-FSLRKLKFLVMDEAD 234
Score = 39.5 bits (88), Expect = 0.071
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F E N + Q K + Y +PTPIQ++ P A+ G +++G+A+
Sbjct: 83 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQ 126
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 83.0 bits (196), Expect = 6e-15
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +3
Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
L + H ++P A + GPI +++ PTREL QI + +G V+GG+
Sbjct: 173 LPMLRHINAQEPLASGD--GPIGMIMGPTRELVTQIGKDCKRYGKAMGFSAVSVYGGSGI 230
Query: 378 REQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEAD 509
Q DL+RG EIV TPGR+ID L G+ TNL+R TY+VLDEAD
Sbjct: 231 AAQIGDLKRGAEIVACTPGRMIDLLTTGSGKITNLRRVTYMVLDEAD 277
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQI +I+ +RPDRQT+M+SAT+P ++ LA L
Sbjct: 278 RMFDMGFEPQITRILANLRPDRQTVMFSATFPHTMEALARAAL 320
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/54 (38%), Positives = 36/54 (66%)
Frame = +2
Query: 14 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
G +V PI+ + +A + V + ++ G+++P PIQAQ P+ MSG++ +GVAK
Sbjct: 109 GKKVPKPIKTWAQAGLNNRVHELIRRSGFEKPMPIQAQALPVIMSGRDCIGVAK 162
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLAYILP + HIN Q P+ G+
Sbjct: 161 AKTGSGKTLAYILPMLRHINAQEPLASGD 189
>UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 580
Score = 83.0 bits (196), Expect = 6e-15
Identities = 42/96 (43%), Positives = 57/96 (59%)
Frame = +3
Query: 222 HKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 401
H+Q + +++ P+ L+LAPTRELA QI + A FG + + GG E +
Sbjct: 229 HQQESNFNK---PLGLILAPTRELALQITKEAKLFGDKLNLNVVTIIGGHQYEETVHSVR 285
Query: 402 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
GV IV+ATPGRLID LE+G NL C + +DEAD
Sbjct: 286 NGVHIVVATPGRLIDSLERGIINLSNCYFFTMDEAD 321
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFP-DYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+T G ++ NP++ + E+ P + +K +GY PTPIQ P+A++G+++VG+A+
Sbjct: 142 ITSKGGDIENPLRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALNGRDIVGIAE 200
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 82.6 bits (195), Expect = 8e-15
Identities = 37/84 (44%), Positives = 56/84 (66%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P ALVL PTRELA Q+++ + G ++ ++G +P Q +L++ IV+ TPGR
Sbjct: 73 PQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGR 132
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
++D +EKGT +L+R YLV+DEAD
Sbjct: 133 VLDHIEKGTLSLERLKYLVIDEAD 156
Score = 40.3 bits (90), Expect = 0.041
Identities = 17/46 (36%), Positives = 31/46 (67%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETT 649
ML+MGF Q+ II+++ R T+++SAT P++V++L+ + T
Sbjct: 158 MLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPT 203
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 82.6 bits (195), Expect = 8e-15
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P AL+L PTRELA Q+ + F + ++GGAP +Q R L++GV++V+ATPGR
Sbjct: 72 PQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVDLVVATPGR 131
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
I F+E G L YLVLDEAD
Sbjct: 132 CIHFIEDGKLELDSLEYLVLDEAD 155
Score = 41.5 bits (93), Expect = 0.018
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
ML+MGF + K+++ DR LM+SAT P +KK+AE +
Sbjct: 157 MLNMGFVEDVEKVLKASPDDRTVLMFSATMPPRLKKIAESYM 198
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 82.6 bits (195), Expect = 8e-15
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Frame = +3
Query: 204 LASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 383
L H H+ P ++ GPIA++L PTREL++Q++ A + +R V+GG+
Sbjct: 727 LIRHVLHQPPLRNND--GPIAIILTPTRELSKQVKSEARPYCQAVNLRILAVYGGSNIGT 784
Query: 384 QARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEAD 509
Q L+RGVEI++ TPGR+ID L TNL R +++VLDEAD
Sbjct: 785 QLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEAD 829
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
R+LD+GFE QI I+ R D+QT M SAT+P ++ LA+ LL
Sbjct: 830 RLLDLGFESQIHNILNNCRKDKQTAMISATFPNYIQNLAKKLL 872
Score = 41.1 bits (92), Expect = 0.023
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL+Y+ P I H+ +QPP+R +
Sbjct: 713 AETGSGKTLSYLFPLIRHVLHQPPLRNND 741
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 82.6 bits (195), Expect = 8e-15
Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LV+APTREL QQI F + V+GG+ +Q +L+RG EIV+ TPG
Sbjct: 469 GPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPG 528
Query: 435 RLIDFL--EKG-TTNLQRCTYLVLDEAD 509
R+ID L G TNL+R TYLV+DEAD
Sbjct: 529 RMIDILCTSSGKITNLRRVTYLVMDEAD 556
Score = 62.9 bits (146), Expect = 7e-09
Identities = 26/45 (57%), Positives = 38/45 (84%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RM DMGFEPQI +I++ IRPDRQT+++SAT+P++V+ LA +L +
Sbjct: 557 RMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNK 601
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V G +V PIQ++ + + +K + Y++P PIQAQ PI MSG++ +GVAK
Sbjct: 386 VHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAK 441
Score = 41.9 bits (94), Expect = 0.013
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL ++LP + HI +QPP+ G+
Sbjct: 440 AKTGSGKTLGFVLPMLRHIKDQPPVEAGD 468
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/82 (47%), Positives = 56/82 (68%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL+L+PTRELA QI + AD + + + VFGG R Q + L RGV+I++ATPGRL+
Sbjct: 80 ALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQALARGVDILVATPGRLL 139
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D +E+ +L+ +L+LDEAD
Sbjct: 140 DLMEQRAIDLRETRHLILDEAD 161
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF + KI+ + DRQ++M+SAT PK ++ L++ +L
Sbjct: 162 RMLDMGFVRDVMKIVGKCPDDRQSMMFSATMPKPIEDLSKKIL 204
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
A++L+PTRELA QI + FG + T GGAP R+Q RDL +GV+I++ATPGRL
Sbjct: 179 AIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLSKGVDILVATPGRLE 238
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D +++ L +LVLDEAD
Sbjct: 239 DLVDQKGLRLDETKFLVLDEAD 260
Score = 53.2 bits (122), Expect = 5e-06
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
+MLD+GF P +++II ++ DRQTL++SAT KE+KKL E L
Sbjct: 261 QMLDIGFLPAVKRIISKVNKDRQTLLFSATMSKEIKKLTETYL 303
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 92 MGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+GY PTPIQ+Q P ++ K+LVG+A+
Sbjct: 121 LGYTLPTPIQSQAIPAVLNSKDLVGLAQ 148
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 82.2 bits (194), Expect = 1e-14
Identities = 44/94 (46%), Positives = 54/94 (57%)
Frame = +3
Query: 228 QPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 407
Q T R G LVLAPTRELA QI+ + ++ CV+GG + Q DLERG
Sbjct: 348 QSTPRGTRGGANVLVLAPTRELALQIEMEVKKYSFRG-MKAVCVYGGGNRNMQISDLERG 406
Query: 408 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
EI+I TPGRL D + ++ TYLVLDEAD
Sbjct: 407 AEIIICTPGRLNDLIMANVIDVSTITYLVLDEAD 440
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIRK++ IRPDRQT+M SATWP V++LA+ +
Sbjct: 441 RMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYM 483
Score = 52.4 bits (120), Expect = 9e-06
Identities = 21/53 (39%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 VHNPIQYFEE--ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ NP+ FE+ A +PD +++ K MG+ +P+PIQ+Q WPI + G +++G+A+
Sbjct: 277 IPNPVWTFEQCFAEYPDMLEEITK-MGFSKPSPIQSQAWPILLQGHDMIGIAQ 328
Score = 33.5 bits (73), Expect = 4.7
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQ--PPIRRGEVRLL 267
+QTG+GKTLA++LP ++H Q P RG +L
Sbjct: 327 AQTGTGKTLAFLLPGMIHTEYQSTPRGTRGGANVL 361
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/97 (41%), Positives = 58/97 (59%)
Frame = +3
Query: 219 AHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 398
+++ P + P AL+LAPTREL+ QI A F + + VR V+GGA R Q +L
Sbjct: 224 SNRPPYSPGSHSSPQALILAPTRELSLQIYGEARKFTYHTPVRCVVVYGGADPRHQVHEL 283
Query: 399 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
RG ++++ATPGRL+D +G +L+LDEAD
Sbjct: 284 SRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDEAD 320
Score = 49.2 bits (112), Expect = 9e-05
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPD------RQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGFEPQIR I++ D RQTL++SAT+P E+++LA + +F +
Sbjct: 321 RMLDMGFEPQIRMIVQGPDSDMPRAGQRQTLLYSATFPVEIQRLAREFMCRHSFLQV 377
Score = 40.7 bits (91), Expect = 0.031
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
P+ F E N + + VK GY +PTP+Q+ G P A++ ++L+ A+
Sbjct: 155 PVLSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMACAQ 202
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 4/32 (12%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAI----VHINNQPPIRRG 252
+QTGSGKT +Y++PAI ++I+N+PP G
Sbjct: 201 AQTGSGKTASYLIPAINEILLNISNRPPYSPG 232
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 82.2 bits (194), Expect = 1e-14
Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVLAPTRELA QI++ G + +R+ C+ GG EQARDL R ++IATPGRLI
Sbjct: 169 ALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLI 228
Query: 444 DFLE--KGTTNLQRCTYLVLDEAD 509
D LE KG +L++ YLV+DE D
Sbjct: 229 DHLEHTKG-FSLKKLQYLVMDEVD 251
Score = 41.9 bits (94), Expect = 0.013
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +2
Query: 35 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+Q F E + + + ++++ Y +PTPIQA P A+ GK++VG+A+
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAE 143
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 81.8 bits (193), Expect = 1e-14
Identities = 42/85 (49%), Positives = 51/85 (60%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP ALVLAPTRELA QIQ+ +R C GG P + Q +L G EIV+A PG
Sbjct: 252 GPYALVLAPTRELALQIQKETLKLATPFGLRVCCCIGGEPMQPQIEELSNGAEIVVAAPG 311
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL D L + L +C ++VLDEAD
Sbjct: 312 RLKDLLNQSYLVLGQCYFVVLDEAD 336
Score = 35.9 bits (79), Expect = 0.88
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V+ EV P++ +++ N D + +K + Y+ PTPIQ PIA+ ++L+ +A+
Sbjct: 165 IFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YENPTPIQCASIPIALKMRDLIALAE 221
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/82 (48%), Positives = 51/82 (62%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVL PTRELAQQ+ + + S V + V+GG EQ R L G I++ATPGRL+
Sbjct: 86 ALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGVSIGEQIRQLANGTHILVATPGRLL 145
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D L K +L + T+LV DEAD
Sbjct: 146 DLLRKRALSLSQLTHLVFDEAD 167
Score = 37.5 bits (83), Expect = 0.29
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF+ +I ++++++ RQTL++SAT + + LL
Sbjct: 168 RMLDMGFKDEIVEVLKRLPSTRQTLLFSATLDDRMLSFSRRLL 210
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P LVL+PTRELA QI Q +G R T +FGG + Q R L+RGV + IATPGR
Sbjct: 70 PQVLVLSPTRELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGR 129
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D +++G +L + VLDEAD
Sbjct: 130 LLDLMDQGYVDLSQAKTFVLDEAD 153
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF P ++ I+ ++ RQT+ ++AT P +V +LA GLL
Sbjct: 154 RMLDMGFMPALKTIVSKLPKQRQTIFFTATMPPKVAQLASGLL 196
Score = 34.3 bits (75), Expect = 2.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 71 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+Q+ + T Y PTPIQ Q P + G +L+G A+
Sbjct: 7 IQEALATEKYHTPTPIQGQAIPHLLEGSDLIGCAQ 41
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 81.8 bits (193), Expect = 1e-14
Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPIA+++APTRELA QI F + C GGA Q DL+RG EIV+ TPG
Sbjct: 577 GPIAIIMAPTRELAHQIYVNCRWFTSILNLNVVCCVGGAGIAGQLSDLKRGTEIVVCTPG 636
Query: 435 RLIDFLEKGT---TNLQRCTYLVLDEAD 509
R+ID L TNL+R TY+V+DEAD
Sbjct: 637 RMIDVLTTSNGKITNLRRVTYVVIDEAD 664
Score = 62.5 bits (145), Expect = 9e-09
Identities = 28/43 (65%), Positives = 37/43 (86%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM D+GFEPQI KII+ IRPDRQ +M+SAT+PK V++LA+ +L
Sbjct: 665 RMFDLGFEPQICKIIQNIRPDRQLVMFSATFPKNVEQLAKRVL 707
Score = 41.5 bits (93), Expect = 0.018
Identities = 16/35 (45%), Positives = 27/35 (77%)
Frame = +1
Query: 151 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++F ++TGSGKTLAY+LP + H+ +QP ++ G+
Sbjct: 542 RDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGD 576
Score = 38.3 bits (85), Expect = 0.16
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V G +V PIQ + + D V ++ + P PIQAQ P MSG++ +G+A+
Sbjct: 491 IKVRGKDVPKPIQNWYQCGLNDRVLNVLIEKKKFINPFPIQAQAVPCIMSGRDFIGIAE 549
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/85 (47%), Positives = 52/85 (61%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP AL+LAP+RELA QI F R+ V GG QA +L +G EI+I TPG
Sbjct: 415 GPYALILAPSRELALQIYDETVKFSAFCSCRSVAVVGGRNAESQAFELRKGCEIIIGTPG 474
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
R+ D L++ T L +C Y++LDEAD
Sbjct: 475 RVKDCLDRAYTVLSQCNYVILDEAD 499
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
+ + G V PI+ + E+ P + + +K GY +PTPIQ Q PIA+ ++L+G+A
Sbjct: 327 IYIKGGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQAIPIALEMRDLIGIA 383
Score = 32.7 bits (71), Expect = 8.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 175 TGSGKTLAYILPAIVHINNQPPI 243
TGSGKT A++LP + ++ PP+
Sbjct: 385 TGSGKTAAFVLPMLTYVKKLPPL 407
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 446
L++APTRELA QI + F + VR ++GG Q L+RG EI++ATPGRLID
Sbjct: 73 LIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEILVATPGRLID 132
Query: 447 FLEKGTTNLQRCTYLVLDEAD 509
+++G+ ++ R T+LVLDEAD
Sbjct: 133 HIKRGSISIDRVTHLVLDEAD 153
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
FEE V ++ MG+++ PIQ P+ ++G+++VG A
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQA 46
Score = 32.7 bits (71), Expect = 8.2
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTL-MWSATWPKEVKKLAEGLL 637
MLDMGF I+ I++ + PD + + ++SAT P E+ +L+E L
Sbjct: 155 MLDMGFIDDIQFILD-LTPDEKVMSLFSATMPIEILRLSEEYL 196
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/85 (44%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNT-CVFGGAPKREQARDLERGVEIVIATPG 434
P+ LVLAPTRELA+Q+++ +F ++ +T C++GG P +Q R L+ GV++ + TPG
Sbjct: 179 PLCLVLAPTRELARQVEK---EFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPG 235
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
R+ID +++G NL ++VLDEAD
Sbjct: 236 RVIDLMKRGALNLSEVQFVVLDEAD 260
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
+ML +GF + I+E++ RQ++M+SAT P ++ L + L
Sbjct: 261 QMLQVGFAEDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYL 303
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 81.8 bits (193), Expect = 1e-14
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADF--GHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 428
GP+ L+L+PTRELA QI + F G S +R+ C GG+ + Q D++RGVEIVIAT
Sbjct: 311 GPLGLILSPTRELALQIHEEVTKFTSGDPS-IRSLCCTGGSELKRQINDIKRGVEIVIAT 369
Query: 429 PGRLIDFLEKGTTNL---QRCTYLVLDEAD 509
PGR ID L + NL +R ++V+DEAD
Sbjct: 370 PGRFIDLLSLNSGNLINPKRIVFVVMDEAD 399
Score = 53.2 bits (122), Expect = 5e-06
Identities = 20/51 (39%), Positives = 38/51 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
R+ D+GFEPQ+ +I++ IRPD+Q +++SAT+P ++K A +L + + ++
Sbjct: 400 RLFDLGFEPQVNQIMKCIRPDKQCVLFSATFPNKLKSFASKILHDPVYITV 450
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V V G + PI + + + + + + + PTPIQAQ P MSG++++G++K
Sbjct: 224 VQVRGRDCPRPILKWSQLGLNSGIMNLLTRELEFTVPTPIQAQAIPAIMSGRDVIGISK 282
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/85 (48%), Positives = 52/85 (61%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
G LVLAPTREL QI F VR T +FGG + Q + LE GV+I++A PG
Sbjct: 80 GARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKALEEGVDIIVAAPG 139
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D +E+G +L + LVLDEAD
Sbjct: 140 RLLDLIEQGLCDLSQLETLVLDEAD 164
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
+MLDMGF I +I+ + DR T+++SAT PK + L E LL
Sbjct: 165 QMLDMGFAKPIERIVATLPEDRHTVLFSATMPKSIAALVESLL 207
Score = 37.5 bits (83), Expect = 0.29
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 38 QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
Q F + + + + GY +PTPIQAQ P+ + G++L+G+A+
Sbjct: 7 QAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQ 52
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
A+++ PTRELA QI + T V+ T ++GG +Q +DLE+GV+IV+ TPGR+I
Sbjct: 91 AIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEKGVDIVVGTPGRII 150
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D L + T +L YLVLDEAD
Sbjct: 151 DHLNRDTLDLSHVEYLVLDEAD 172
Score = 40.7 bits (91), Expect = 0.031
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RMLDMGF + +II++ +++T ++SAT PKE+ +A + E
Sbjct: 173 RMLDMGFLDDVLEIIKRTGENKRTFLFSATMPKEIVDIARKFMKE 217
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/89 (44%), Positives = 55/89 (61%)
Frame = +3
Query: 243 SER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 422
S++ P LVL+PTRELA QI V + G +++ CV+GG+ K Q + GV+IVI
Sbjct: 187 SKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVI 246
Query: 423 ATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
TPGRL D +E L +++VLDEAD
Sbjct: 247 GTPGRLRDLIESNVLRLSDVSFVVLDEAD 275
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSIL 664
RMLDMGFE +R I+ RQ +M+SATWP +V KLA+ + + I+
Sbjct: 276 RMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVII 327
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 VTVSGVEV--HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
VT GVE + ++ F E+N P+ V KT +++P+PIQ+ WP + G++L+G+AK
Sbjct: 102 VTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAK 159
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 81.4 bits (192), Expect = 2e-14
Identities = 42/85 (49%), Positives = 52/85 (61%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP ALV+ PTRELA QI++ F + + G +QA L +G EIVIATPG
Sbjct: 286 GPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPG 345
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D LE+ L +C YLVLDEAD
Sbjct: 346 RLLDCLERRYVVLNQCNYLVLDEAD 370
Score = 36.3 bits (80), Expect = 0.66
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIR 246
S TGSGKT A++LP + +I+ PP+R
Sbjct: 254 SATGSGKTAAFVLPMLAYISRLPPMR 279
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 81.4 bits (192), Expect = 2e-14
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLERGVEIVIATP 431
GP+ L+LAPTRELA QI + F + +R+ C GG+ ++Q DL+RG EIV+ATP
Sbjct: 330 GPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATP 389
Query: 432 GRLIDFLEKGTTNL---QRCTYLVLDEAD 509
GR ID L L +R T++V+DEAD
Sbjct: 390 GRFIDILTLNDGKLLSTKRITFVVMDEAD 418
Score = 50.0 bits (114), Expect = 5e-05
Identities = 19/43 (44%), Positives = 34/43 (79%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
R+ D+GFEPQI +I++ +RPD+Q +++SAT+P +++ A +L
Sbjct: 419 RLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAVRVL 461
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
S+TGSGKT++Y+LP + + Q P+ + E
Sbjct: 300 SKTGSGKTISYLLPLLRQVKAQRPLSKHE 328
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 81.0 bits (191), Expect = 2e-14
Identities = 42/89 (47%), Positives = 53/89 (59%)
Frame = +3
Query: 228 QPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 407
QP ER GP LVL PTRELA Q+ + + Y ++ CV+GG ++ Q +ERG
Sbjct: 140 QPVPKCERNGPGMLVLTPTRELALQVDAECKKYSYKDY-KSVCVYGGGDRKAQIHKVERG 198
Query: 408 VEIVIATPGRLIDFLEKGTTNLQRCTYLV 494
V+IVIATPGRL D NL+ TYLV
Sbjct: 199 VDIVIATPGRLHDLQMNKLINLRSITYLV 227
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLD+GFEPQI KI+ +RPDRQT+M SATWP V+++A L
Sbjct: 259 RMLDLGFEPQIMKILLDVRPDRQTVMTSATWPASVRRMATSYL 301
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 VHNPIQYFEEANFPDY--VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ P + F EA F Y + VK G+ PTPIQ+Q WP+ +SG +L+ +A+
Sbjct: 69 IPKPCRTFLEA-FQHYTEIMDNVKHAGFVNPTPIQSQAWPVLLSGDDLIAIAQ 120
Score = 41.1 bits (92), Expect = 0.023
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQP 237
+QTG+GKTLAY+LP +H+N QP
Sbjct: 119 AQTGTGKTLAYLLPGFIHMNGQP 141
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 81.0 bits (191), Expect = 2e-14
Identities = 40/84 (47%), Positives = 51/84 (60%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ LVLAPTREL QI VA +++R+ V GG R Q D RG +IATPGR
Sbjct: 178 PLLLVLAPTRELVNQITSVAKTLLKLTHLRSVSVIGGVDARSQINDASRGCHALIATPGR 237
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D ++G +L+ C LV+DEAD
Sbjct: 238 LKDLTDRGIFSLKYCNKLVIDEAD 261
Score = 49.2 bits (112), Expect = 9e-05
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIR--PDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIR+II + R T M+SAT+PK V LA L+
Sbjct: 262 RMLDMGFEPQIREIINNLPSVSKRHTSMFSATFPKSVMSLASKLM 306
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/84 (45%), Positives = 56/84 (66%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P AL+L PTRELA Q+++ + G ++ T VFG + +Q +L++ IV+ TPGR
Sbjct: 71 PQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGR 130
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
++D +EKGT L R +YLV+DEAD
Sbjct: 131 VLDHIEKGTLPLDRLSYLVIDEAD 154
Score = 39.9 bits (89), Expect = 0.054
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
ML+MGF Q+ II+ + +R T+++SAT P++++KL+
Sbjct: 156 MLNMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLS 193
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLI 443
LVLAPTRELAQQ + + FG +++ C+FGG K QAR+L ++ +V+ TPGR +
Sbjct: 258 LVLAPTRELAQQSHEHLSAFGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTL 317
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + G +L +YLVLDEAD
Sbjct: 318 DLADSGELDLSSVSYLVLDEAD 339
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI---RPDRQTLMWSATWPKEVKKLAEGLL 637
RMLD GFE IR+II + RQT+M+SATWP+ V++LA L
Sbjct: 340 RMLDAGFENDIRRIIAHTPGHKEGRQTVMFSATWPESVRRLASTFL 385
Score = 35.9 bits (79), Expect = 0.88
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +2
Query: 98 YKEPTPIQAQGWPIAMSGKNLVGVAK 175
+++PTPIQA WP +S K++VG+A+
Sbjct: 193 FEKPTPIQACSWPALLSKKDVVGIAE 218
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 80.6 bits (190), Expect = 3e-14
Identities = 48/107 (44%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = +3
Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
L + H + ++P + GPI L+L PTRELA QI A F VFGG
Sbjct: 763 LPMIRHVSAQRPLQEGD--GPIGLILVPTRELATQIYLEAKPFLKAYKYEIVAVFGGTGI 820
Query: 378 REQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEAD 509
+ Q +L+RG EIV+ATPGRLID L TNL+R T +V+DEAD
Sbjct: 821 KGQLSELKRGCEIVVATPGRLIDVLTTSNGKITNLKRITMVVIDEAD 867
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/43 (58%), Positives = 35/43 (81%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM D+GFEPQI KI+ RPD+QT+++SAT+PK V+ LA+ L+
Sbjct: 868 RMFDLGFEPQIAKILATTRPDKQTVLFSATFPKNVENLAKKLM 910
Score = 41.5 bits (93), Expect = 0.018
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLAY+LP I H++ Q P++ G+
Sbjct: 751 AETGSGKTLAYLLPMIRHVSAQRPLQEGD 779
Score = 37.5 bits (83), Expect = 0.29
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLV 163
+ V G EV PI+ + ++ D + + ++ Y +P PIQ Q P+ MSG++++
Sbjct: 683 IQVKGQEVPRPIKSWLQSGLSDRILEVLIEKKKYDKPFPIQCQSLPVIMSGRDMI 737
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 80.6 bits (190), Expect = 3e-14
Identities = 44/102 (43%), Positives = 56/102 (54%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
A+VL PTRELA Q+ A F S +R ++GG Q L+RGV IV+ TPGR+I
Sbjct: 74 AIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHIVVGTPGRVI 133
Query: 444 DFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQ 569
D LE+G L + + VLDEAD EK LS+ Q
Sbjct: 134 DLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQ 175
Score = 39.9 bits (89), Expect = 0.054
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +2
Query: 449 LGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
L +G+ +L V F ML MGF + KI+ Q DRQT ++SAT P ++ L
Sbjct: 136 LERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTALFSATMPPSIRMLVN 195
Query: 629 GLL 637
L
Sbjct: 196 KFL 198
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/84 (47%), Positives = 51/84 (60%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P AL+L PTRELAQQ+ + + +R CV+GG Q LE G +I+IATPGR
Sbjct: 78 PHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGADILIATPGR 137
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D L G N+ + LVLDEAD
Sbjct: 138 LLDHLFNGNVNISKTGVLVLDEAD 161
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/43 (41%), Positives = 32/43 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF P +++I+ ++ D+Q +++SAT+ K +K +A L+
Sbjct: 162 RMLDMGFWPDLQRILRRLPNDKQIMLFSATFEKRIKTIAYKLM 204
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P +L+L PTRELA Q+ + +G + + + GG P EQ LE+GV+++IATPGR
Sbjct: 73 PRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEKGVDVLIATPGR 132
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D E+G L C LV+DEAD
Sbjct: 133 LLDLFERGKILLSSCEMLVIDEAD 156
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF P I I ++ RQTL++SAT P +KKLA+ L
Sbjct: 157 RMLDMGFIPDIETICTKLPTSRQTLLFSATMPPAIKKLADRFL 199
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F + + Q V +GY+EPTP+QA P + ++L+ VA+
Sbjct: 3 FADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQ 46
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/82 (46%), Positives = 53/82 (64%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVLAPTRELA QI + +G +R +FGG + Q R LE+G++I++ATPGRL+
Sbjct: 78 ALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLL 137
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + +G +L + VLDE D
Sbjct: 138 DLINQGFIDLSHVEHFVLDETD 159
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
+MLDMG +++II + +RQ +++SAT P E++KLA+ +L
Sbjct: 160 QMLDMGMLHDVKRIITYLPRERQNMLFSATMPVEIEKLADTIL 202
Score = 34.3 bits (75), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 71 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+Q+ + GY E TPIQA+ P + G +L+G A+
Sbjct: 12 IQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQ 46
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 80.6 bits (190), Expect = 3e-14
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP ALVL PTRELA Q+ + +G R V+GGAP Q R L +GV++V+ATPG
Sbjct: 128 GPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRALVQGVDVVVATPG 187
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
R +D + +GT L +VLDEAD
Sbjct: 188 RALDHMGRGTLRLDGLHTVVLDEAD 212
Score = 46.8 bits (106), Expect = 5e-04
Identities = 48/194 (24%), Positives = 79/194 (40%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTSCQPLCT 223
F E + + + +GY+EPTPIQ + P ++G++L+G A K PL
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT-AAFALPLLH 117
Query: 224 *TTNRLFGEVRSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLGE 403
T+ G+ L + ++ S + R+ + R L +
Sbjct: 118 RLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRALVQ 177
Query: 404 GSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTL 583
G +G+G +L +H MLDMGF I I+EQ RQT+
Sbjct: 178 GVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKRQTV 237
Query: 584 MWSATWPKEVKKLA 625
++SAT P + ++A
Sbjct: 238 LFSATLPPRMDQIA 251
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
A+++ PTRELA+QIQ V G + +R+ ++GG + Q + L RGVEI + PGRL+
Sbjct: 73 AMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLL 132
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D LE+GT L+ L+LDEAD
Sbjct: 133 DHLERGTLTLEHLDMLILDEAD 154
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
+M DMGF P +R+I+ RQT+++SAT P ++ LA L E
Sbjct: 155 QMFDMGFLPDVRRILRLAPAQRQTMLFSATMPDAIRALAREALRE 199
Score = 42.3 bits (95), Expect = 0.010
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F+ F + G++ +GY PTPIQ Q P A+ G++++G+A+
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQ 46
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P AL+LAPTRELAQQI + + + T + GG P+ +Q L RGV+++IATPGR
Sbjct: 449 PRALILAPTRELAQQIDRTIQPIARSVGLFTTTIVGGVPQYKQVAALTRGVDVIIATPGR 508
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
+ D +E+G +L + VLDEAD
Sbjct: 509 VEDLIEQGRLDLSQVKVTVLDEAD 532
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI +++ PTREL QI + A +G V+GG+ Q +L+RG EIV TPG
Sbjct: 403 GPIGMIMGPTRELVTQIGKEAKRYGKALGFNAVSVYGGSGIAAQIGELKRGAEIVACTPG 462
Query: 435 RLIDFLEKG---TTNLQRCTYLVLDEAD 509
R+ID L G TNL+R TY+VLDEAD
Sbjct: 463 RMIDILTTGGGKITNLRRVTYIVLDEAD 490
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQI +I+ +RPDRQT+M+SAT+P ++ LA L
Sbjct: 491 RMFDMGFEPQITRILANLRPDRQTVMFSATFPHTMEALARAAL 533
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = +2
Query: 14 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
G +V PI+ + A + + ++ G+++P PIQAQ P+ MSG++ +G+AK
Sbjct: 322 GKKVPKPIKTWAHAGLSGRIHELIRRCGFEKPMPIQAQALPVIMSGRDCIGIAK 375
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLAYILP + HIN Q P++ G+
Sbjct: 374 AKTGSGKTLAYILPMLRHINAQEPLKNGD 402
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 80.6 bits (190), Expect = 3e-14
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
PI L+LAPTRELA QI A F + ++ ++GG + Q +L++G +I++ATPGR
Sbjct: 452 PICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGR 511
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D LEKG L T+LVLDEAD
Sbjct: 512 LNDILEKGKIKLFLTTFLVLDEAD 535
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVH-INNQPP 240
+QTGSGKT Y+LP I H + N PP
Sbjct: 406 AQTGSGKTAGYLLPIINHMLINDPP 430
>UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 602
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ +++ PTRELA QI A F + + +R V+GG R+QA+ L++G +I+IA+PGR
Sbjct: 206 PLVVIICPTRELAVQIFNEARKFCYRTMLRPCVVYGGGALRDQAQQLQKGCDILIASPGR 265
Query: 438 LIDFLEK-GTTNLQRCTYLVLDEAD 509
LI F+ K T L+R Y+V+DEAD
Sbjct: 266 LIHFINKPETLTLRRVRYMVIDEAD 290
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 80.2 bits (189), Expect = 4e-14
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL+L PTRELA Q+ + + +R+ VFGG Q +L RGVEI+IATPGRL+
Sbjct: 90 ALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLL 149
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D +++ T NL + LVLDEAD
Sbjct: 150 DHVQQKTANLGQVQILVLDEAD 171
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF P +++I+ + +RQTL++SAT+ E+KKLA L
Sbjct: 172 RMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYL 214
Score = 38.3 bits (85), Expect = 0.16
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F++ + + + GY PTPIQA+ P+ +SG++++G A+
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQ 56
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 80.2 bits (189), Expect = 4e-14
Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 440
ALVLAPTRELA Q Q DF T+ + V+GG+P Q L+RG ++V+ TPGR+
Sbjct: 116 ALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQIGALKRGAQVVVGTPGRV 175
Query: 441 IDFLEKGTTNLQRCTYLVLDEAD 509
ID +EKG +L LVLDEAD
Sbjct: 176 IDLIEKGALDLSHVRMLVLDEAD 198
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F P+ + V MG++ PTPIQA P + +++VG+A+
Sbjct: 47 FASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQ 90
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+A +LAPTREL Q+ A F + S ++ ++GG QA L G +++ATPGR
Sbjct: 530 PLAAILAPTRELVVQLFTEARKFSYNSSLKPVVLYGGVAVAHQADRLRMGCHLLVATPGR 589
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L DF+++G N Q YL+LDEAD
Sbjct: 590 LEDFIKRGKVNFQNLKYLILDEAD 613
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIE--QIRPD--RQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
+M+DMGF PQI IIE + P R TLM+SAT+P +++ LA L + F ++
Sbjct: 614 KMIDMGFGPQIEHIIEFSGMPPKGIRNTLMFSATFPDQIQHLAAQFLNDYLFLTV 668
Score = 39.5 bits (88), Expect = 0.071
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ +SG PIQ F EAN + + YKEPTPIQ P ++ ++++ A+
Sbjct: 438 IELSGTNRPKPIQSFSEANLHPVCLKNLDLAKYKEPTPIQKYAIPAILAKRDVMACAQ 495
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 80.2 bits (189), Expect = 4e-14
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +3
Query: 228 QPTAYSE-R*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 404
QP E R GP LV+APTRELA QI++ + ++ C++GG +R Q ++
Sbjct: 388 QPVPRGEARGGPNVLVMAPTRELALQIEKEVFKYQFRD-IKAICLYGGGDRRTQINKVKG 446
Query: 405 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
GVEI+IATPGRL D + ++ TYLVLDEAD
Sbjct: 447 GVEIIIATPGRLNDLVAANVIDITSITYLVLDEAD 481
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQIRK++ IRPDRQT+M SATWP V++LA+ +
Sbjct: 482 RMLDMGFEPQIRKLLLDIRPDRQTIMTSATWPPGVRRLAQSYM 524
Score = 56.0 bits (129), Expect = 8e-07
Identities = 21/53 (39%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 VHNPIQYFEEA--NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ NP+Q FE+A +P+ +++ +K G+ +P+PIQAQ WP+ + G++L+G+A+
Sbjct: 317 IPNPVQTFEQAFHEYPELLEE-IKKQGFAKPSPIQAQAWPVLLKGEDLIGIAQ 368
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGEVR 261
+QTG+GKTLA++LPA +HI Q P+ RGE R
Sbjct: 367 AQTGTGKTLAFLLPAFIHIEGQ-PVPRGEAR 396
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/85 (44%), Positives = 54/85 (63%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP L+LAPTRELA QI+ A F + V GG +EQA ++ G E+++ATPG
Sbjct: 239 GPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATPG 298
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D +++ L +C Y+V+DEAD
Sbjct: 299 RLLDVIDRRLLVLNQCCYVVMDEAD 323
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
VT G + NP++ + E P V+ + MGYKEPTPIQ PIA+ ++++GVA+
Sbjct: 150 VTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAE 208
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 79.8 bits (188), Expect = 5e-14
Identities = 41/82 (50%), Positives = 52/82 (63%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVL+PTRELA Q+ + G VR ++GGA R Q ++RG IV+ATPGRL+
Sbjct: 116 ALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKRGAHIVVATPGRLV 175
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
DFLE+ LQ +VLDEAD
Sbjct: 176 DFLEQKMIKLQSVKTVVLDEAD 197
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 35 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN-LVGVA 172
+ FE V + MG+ PTPIQ Q PI ++G N +G+A
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLA 89
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 79.8 bits (188), Expect = 5e-14
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGH-TSYVRNTCVFGGAPKREQARDLERGVEIVIATP 431
GP+ LV+ PTRELAQQI +VA T +V T V GG + Q L+ G +I++ATP
Sbjct: 138 GPVMLVITPTRELAQQIDEVAGKIADVTGHVAVTVV-GGVSYKPQTAALKYGCDILVATP 196
Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
GRL+D +E+G +L LVLDEAD
Sbjct: 197 GRLVDLIEQGACHLDEVKVLVLDEAD 222
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 610
RMLDMGF P +R+I+ + +RQTL++SAT +E
Sbjct: 223 RMLDMGFLPAVRRIVRETPAERQTLLFSATLDEE 256
Score = 39.9 bits (89), Expect = 0.054
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F+E D + + ++ +GY PTP+QA P+ + G++L+ A+
Sbjct: 48 FDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQ 91
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 79.8 bits (188), Expect = 5e-14
Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 ER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 425
E G I L++APTRELA QI ++ +R V+GG+P EQ L+RGVEIV
Sbjct: 458 ENEGMIVLIIAPTRELASQIGVESSKLCKLVGIRTKAVYGGSPIGEQLNALKRGVEIVCG 517
Query: 426 TPGRLIDFL--EKG-TTNLQRCTYLVLDEAD 509
TPGRLI+ L G TNL+R T++V+DEAD
Sbjct: 518 TPGRLIEVLTISNGKVTNLRRVTFVVIDEAD 548
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM D+GF PQI I++ IRPDRQT ++SAT+P ++ LA+ +L
Sbjct: 549 RMFDLGFSPQISAIVDNIRPDRQTALFSATFPPTIEALAKKIL 591
Score = 41.9 bits (94), Expect = 0.013
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT+AY+LPAI H+ QP +R E
Sbjct: 432 AETGSGKTMAYLLPAIRHVLYQPKLRENE 460
Score = 37.5 bits (83), Expect = 0.29
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V G PI F + PD + ++ Y++P PIQ Q P M G++++ +A+
Sbjct: 376 IRVRGKYCPRPIYNFSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAE 433
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 79.8 bits (188), Expect = 5e-14
Identities = 46/107 (42%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Frame = +3
Query: 204 LASHCAHKQPTAY-SER*GPIALVLAPTRELAQQIQQVAADFGHTSY----VRNTCVFGG 368
L S+ +K Y + + GP L+LAP RELA QI+ A + ++ +R + GG
Sbjct: 200 LISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEAQKLLNKTHELKRIRTLSIVGG 259
Query: 369 APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+QA L +GVEI+IATPGR+ D LEK T L +C+Y++LDEAD
Sbjct: 260 RNIDQQAFSLRKGVEIIIATPGRMQDCLEKTLTVLVQCSYVILDEAD 306
Score = 46.4 bits (105), Expect = 6e-04
Identities = 18/58 (31%), Positives = 39/58 (67%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V G +V NPI+ +++ + + + ++ +GY++PTPIQ Q PI + ++++G+A+
Sbjct: 130 INVRGKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQCIPIGLKLRDMIGIAE 187
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPD--RQTLMWSATWPKEVKKLAEGLL 637
RM+D+GF+ + I++QI P+ R T M+SAT KE++ +A+ L
Sbjct: 307 RMIDLGFQDSLNFILDQIPPEIQRTTHMFSATMQKELENIAKRYL 351
Score = 33.9 bits (74), Expect = 3.5
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQP 237
++TGSGKT+A+++P I ++ N+P
Sbjct: 186 AETGSGKTIAFLIPLISYVGNKP 208
>UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 548
Score = 79.8 bits (188), Expect = 5e-14
Identities = 43/100 (43%), Positives = 55/100 (55%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P ALVL PTREL QQI + + R V+GG + Q +L +G +IATPGR
Sbjct: 191 PSALVLVPTRELVQQILLEFNKMLYRCFPRAVGVYGGQNRSRQIHELSKGCHFMIATPGR 250
Query: 438 LIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLS 557
LIDFL++G + C +VLDEAD H+ K LS
Sbjct: 251 LIDFLDEGMLRMDHCHSVVLDEADRMLDMGFEHQIRKILS 290
Score = 36.3 bits (80), Expect = 0.66
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 10/53 (18%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI-----RPD-----RQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFE QIRKI+ +P RQT+++SAT+P V ++ L
Sbjct: 275 RMLDMGFEHQIRKILSNPDYGMPQPSGDGLPRQTVLFSATFPPSVLQIGRSFL 327
Score = 35.9 bits (79), Expect = 0.88
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPP 240
SQTGSGKTLAY+LP + I N P
Sbjct: 151 SQTGSGKTLAYVLPIVNRILNSYP 174
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 79.8 bits (188), Expect = 5e-14
Identities = 38/85 (44%), Positives = 56/85 (65%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP L+LAPTREL QI Q + F + + +GG + +QA+ ++R +I++A PG
Sbjct: 177 GPEILILAPTRELVMQIAQQVSLFMKPNNLTVATAYGGQNRDQQAQQIKRNPDILVACPG 236
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL DFL++G +L + TYLV+DEAD
Sbjct: 237 RLKDFLQEGILDLSKVTYLVIDEAD 261
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
R+LDMGFE +R I+++ R DRQT+ +SATWPK V+ L+
Sbjct: 262 RLLDMGFEDDVRFIVQRTRQDRQTVFFSATWPKAVRNLS 300
Score = 39.9 bits (89), Expect = 0.054
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ G P + FP +Q + + ++ PTPIQ+ +P+ +SG +L+GVA+
Sbjct: 90 IDGQPCPYPFLTWGGTQFPPQIQNVIDGLNFRAPTPIQSVVFPLILSGYDLIGVAE 145
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 79.8 bits (188), Expect = 5e-14
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE-QARDLERGVEIVIATP 431
GP L+L PTRELA QI+ F ++ C++GG R+ Q +L R I++ATP
Sbjct: 172 GPQMLILVPTRELAMQIESEIQLFTQNYRLKTLCIYGGINNRKNQFYNLGRFPNILVATP 231
Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
GRL+DFL +G T L +YLV+DEAD
Sbjct: 232 GRLLDFLREGATTLANVSYLVIDEAD 257
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
R+L++GFE IR+I++QIR DRQT+ +SATWPK VK LA
Sbjct: 258 RLLELGFEDTIREIVQQIRFDRQTVFFSATWPKAVKDLA 296
Score = 37.1 bits (82), Expect = 0.38
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 5 TVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
T +V P + A FP + + ++ + +K PT IQ+ +PI ++G +++G+A+
Sbjct: 83 TFENQKVPPPFLSWASAGFPIPILESIEQLQFKSPTIIQSVVFPIILAGYDVIGIAQ 139
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQ 234
+QTGSGKT+AY+LP ++ I +Q
Sbjct: 138 AQTGSGKTIAYLLPGLIQITSQ 159
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 79.4 bits (187), Expect = 7e-14
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL++APTRELA QI + +G +R VFGG Q L+ GVEI++ATPGRL+
Sbjct: 84 ALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQIAALQAGVEILVATPGRLL 143
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D +E+ N + LVLDEAD
Sbjct: 144 DLVEQKAVNFSKTEILVLDEAD 165
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF P I++++ + P RQ+LM+SAT+ E++KLA+ LL
Sbjct: 166 RMLDMGFLPDIKRVMALLSPQRQSLMFSATFSGEIRKLADSLL 208
Score = 32.7 bits (71), Expect = 8.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F + + V GY PTPIQAQ P ++GK+++ A+
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQ 50
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 79.4 bits (187), Expect = 7e-14
Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPG 434
P AL+LAPTREL QI + A G + V V+GGA +Q L+RG +IV+ATPG
Sbjct: 169 PRALILAPTRELVMQIVKDAKKLGRYTGVNADAVYGGAEYEKQMELLKRGKTDIVVATPG 228
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLIDF K N C LV+DEAD
Sbjct: 229 RLIDFHNKRLVNFDNCQTLVIDEAD 253
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI--RPDRQTLMWSATWPKEVKKLA 625
RMLDMGF P +R+I+ + + DRQTLM+SAT +V L+
Sbjct: 254 RMLDMGFIPDVRRIVSWMPKKRDRQTLMFSATISSDVNNLS 294
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/82 (42%), Positives = 55/82 (67%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL++ PTRELA Q++ +D G VR + +FG ++Q +L++ V IV+ATPGR++
Sbjct: 74 ALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVATPGRIL 133
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + +G+ L+ YLV+DEAD
Sbjct: 134 DHINRGSIKLENVKYLVIDEAD 155
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 79.4 bits (187), Expect = 7e-14
Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGH-TSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
P ALVL PTRELAQQ+ + +G +R +FGGA R+Q + L G IV+ATPG
Sbjct: 78 PQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTHIVVATPG 137
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D +E+ + +L +VLDEAD
Sbjct: 138 RLLDHIERRSIDLTGINAVVLDEAD 162
Score = 44.4 bits (100), Expect = 0.003
Identities = 16/44 (36%), Positives = 31/44 (70%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F PD++Q+ ++++GY+ TPIQA P+ + G+++VG+A+
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQ 54
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 79.4 bits (187), Expect = 7e-14
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEPQI+KI+ QIRPDRQTL WSATWPKEV++LA L
Sbjct: 225 RMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFL 267
Score = 72.1 bits (169), Expect = 1e-11
Identities = 27/58 (46%), Positives = 43/58 (74%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+TV G +V P++ F + FP+YV Q + G+ EPTPIQ+QGWP+A+ G++L+G+A+
Sbjct: 81 ITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAE 138
Score = 70.5 bits (165), Expect = 3e-11
Identities = 54/128 (42%), Positives = 64/128 (50%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LVLAPTRELA QIQQ A FG VEIVIATPG
Sbjct: 166 GPIVLVLAPTRELAVQIQQEATKFG--------------------------VEIVIATPG 199
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK* 614
RLID +E TNL+R TYLVLDEAD + +K +S+ + PK+
Sbjct: 200 RLIDMIESHHTNLRRITYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEV 259
Query: 615 RNLLRDYL 638
L R++L
Sbjct: 260 EQLARNFL 267
Score = 46.4 bits (105), Expect = 6e-04
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLAY+LPAIVH+N QP + G+
Sbjct: 137 AETGSGKTLAYLLPAIVHVNAQPILAPGD 165
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 79.4 bits (187), Expect = 7e-14
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVL PTRELA+Q+Q +F +R ++GG Q R LER ++V+ATPGRL+
Sbjct: 72 ALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLER-ADVVVATPGRLL 130
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D +E+GT +L LVLDEAD
Sbjct: 131 DHIERGTIDLGDVEILVLDEAD 152
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
RMLDMGF + +II++ DRQT+M+SAT K+++ L+
Sbjct: 153 RMLDMGFIDDVEEIIDECPSDRQTMMFSATVSKDIQYLS 191
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +2
Query: 35 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTSC 208
++ F++ D + + ++ ++EPT IQ P+ + GK+++G A K C
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGC 58
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 79.4 bits (187), Expect = 7e-14
Identities = 42/86 (48%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATP 431
GP AL+LAPTRELA QIQ F C+ G E A L G EI++ATP
Sbjct: 333 GPYALILAPTRELATQIQAEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATP 392
Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
GRL+D LE+ L +C+Y+VLDEAD
Sbjct: 393 GRLVDCLERHLLVLSQCSYVVLDEAD 418
Score = 58.0 bits (134), Expect = 2e-07
Identities = 21/58 (36%), Positives = 39/58 (67%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ G + NP++++EE+N P ++ +K +GY EPTP+Q PIA+ ++L+G++K
Sbjct: 245 IVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIALQCRDLIGISK 302
Score = 33.5 bits (73), Expect = 4.7
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPI 243
S+TGSGKT A++LP + +I PP+
Sbjct: 301 SKTGSGKTAAFVLPMLSYIEPLPPL 325
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL+LAPTRELA QI+Q + ++++ V GG K Q + + G++++IATPGRL
Sbjct: 163 ALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLT 222
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + G +L + +LVLDEAD
Sbjct: 223 DLMRDGLVDLSQTRWLVLDEAD 244
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF +++I + +RQT ++SAT PKE+ LAE LL
Sbjct: 245 RMLDMGFINDVKRIAKATHAERQTALFSATMPKEIASLAERLL 287
Score = 34.3 bits (75), Expect = 2.7
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 77 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+GV+ G EP PIQ Q P + G++++G+A+
Sbjct: 100 KGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQ 132
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +3
Query: 264 ALVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 440
AL+LAPTRELAQQI Q+ H + VFGGA Q RD+ RG +I++ATPGRL
Sbjct: 85 ALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGAQIIVATPGRL 144
Query: 441 IDFLEKGTTNLQRCTYLVLDEAD 509
+D +++ L Y+VLDEAD
Sbjct: 145 MDLMKRREVKLDALKYMVLDEAD 167
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/84 (48%), Positives = 51/84 (60%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+AL++APTRELA Q+QQ + R GG R +A+ LERG IV+ TPGR
Sbjct: 118 PLALIVAPTRELAMQVQQELLWLYGPAGARVVSCIGGMDARREAQALERGCHIVVGTPGR 177
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D L +G NL R +VLDEAD
Sbjct: 178 LCDHLGRGRLNLSRLRAVVLDEAD 201
Score = 37.9 bits (84), Expect = 0.22
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +2
Query: 449 LGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
LG+G L+ + MLD+GF ++ +I++ +R+TL++SAT +E+ LA+
Sbjct: 182 LGRGRLNLSRLRAVVLDEADEMLDLGFRDELEEILDATPAERRTLLFSATIAREIAALAK 241
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P ALVL PTRELA Q+++ + G ++ V+G AP Q ++L++ +V+ TPGR
Sbjct: 73 PQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKTHVVVGTPGR 132
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
+ID +EKGT + + YLV+DEAD
Sbjct: 133 IIDHMEKGTFDTSQIKYLVIDEAD 156
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
M +MGF QI II+ + R T++ SAT P ++ L+
Sbjct: 158 MFNMGFVDQIETIIKDLSKKRVTMLLSATMPSAIETLS 195
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 79.0 bits (186), Expect = 1e-13
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
P ALVL PTRELA Q+ + +G + S + ++GG+ Q L RG ++V+ TPG
Sbjct: 82 PQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGTPG 141
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK* 614
R+ID LE+ T +L R +LVLDEAD E+ LS+ + ++ P
Sbjct: 142 RMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALFSATMPPAI 201
Query: 615 RNLLRDYL 638
R L YL
Sbjct: 202 RKLSAKYL 209
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F + V + + +GY+ PT IQA P M+G ++VG+A+
Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQ 58
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSY-VRNTCVFGGAPKREQARDLERGVEIVIATPGRL 440
ALVLAPTRELA QIQ D VR+ C++GGAP +Q L++ +IV+ATPGRL
Sbjct: 83 ALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQITTLKKHPQIVVATPGRL 142
Query: 441 IDFLEKGTTNLQRCTYLVLDEAD 509
+D +++ T L + +VLDEAD
Sbjct: 143 MDHMKRRTVKLDKVETVVLDEAD 165
Score = 33.5 bits (73), Expect = 4.7
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
RMLDMGF + +I++QI+ + ++SAT +EV ++
Sbjct: 166 RMLDMGFIHDVTRILDQIKSRKNLGLFSATISREVMDIS 204
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL+L PTRELA Q+ + + +R+T V+GG Q + L RGVE+VIATPGRL+
Sbjct: 99 ALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQIQTLRRGVELVIATPGRLL 158
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D +++ + NL + LVLDEAD
Sbjct: 159 DHVQQKSINLGQVQVLVLDEAD 180
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETT 649
RMLDMGF P +++II + RQ L++SAT+ E++KLA+ + T
Sbjct: 181 RMLDMGFLPDLQRIINLLPKTRQNLLFSATFSPEIQKLAKSFMVSPT 227
Score = 41.5 bits (93), Expect = 0.018
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +2
Query: 35 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ + + A PD +Q+ + GY +PTPIQA+ P+ M+G +++G A+
Sbjct: 20 VTFADFALHPD-IQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQ 65
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ +VLAPTRELA+Q+ G++ ++ CV+GG P REQ L G ++VI TPGR
Sbjct: 163 PMCVVLAPTRELAKQVFADFDWIGNSFGFKSVCVYGGTPYREQEMGLRGGCDVVIGTPGR 222
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
+ D LE+ T + + + VLDEAD
Sbjct: 223 MKDHLERKTLMMDKLKFRVLDEAD 246
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ LVL PTRELAQQ+ + V+GG+P+ Q +++++GV+IV+ PGR
Sbjct: 141 PLVLVLLPTRELAQQVSNEFELMKGKDRYKVCSVYGGSPEYPQIQEIKKGVDIVVGCPGR 200
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
++DF+E+G N+ + + L LDEAD
Sbjct: 201 VLDFIERGILNVSKISVLTLDEAD 224
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 78.6 bits (185), Expect = 1e-13
Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = +3
Query: 198 LHLASHCAHKQPTAYSER*GPI-ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 374
L L H +QP A R P+ AL+L PTRELA QI + D+ +R+ VFGG
Sbjct: 57 LPLLQHLITRQPHAKGRR--PVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS 114
Query: 375 KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSL 554
Q L GV++++ATPGRL+D + L + LVLDEAD H + L
Sbjct: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL 174
Query: 555 SK 560
+K
Sbjct: 175 TK 176
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF IR+++ ++ RQ L++SAT+ ++K LAE LL
Sbjct: 160 RMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLL 202
Score = 36.3 bits (80), Expect = 0.66
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 62 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
PD + + V GY+EPTPIQ Q P + G++L+ A+
Sbjct: 10 PD-ILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQ 46
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
PI L LAPTRELA+QI + G ++ TC++GG Q + RG+++V+ TPGR
Sbjct: 175 PIILALAPTRELAKQISEYFEAIG--PHLSTTCIYGGTSYWPQESAIRRGLDVVVGTPGR 232
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
++D++ K T +L + ++VLDE D
Sbjct: 233 ILDYIRKNTLDLSKLKHVVLDEVD 256
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVL PTRELA Q+ + +G +R+ VFGG P Q + L GV++++ATPGRL+
Sbjct: 76 ALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLL 135
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D +++ + LVLDEAD
Sbjct: 136 DLVQQNVVKFNQLEILVLDEAD 157
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RMLDMGF I+KI+ + RQ LM+SAT+ E+++LA+GL+ +
Sbjct: 158 RMLDMGFIRDIKKILALLPAKRQNLMFSATFSDEIRELAKGLVNQ 202
Score = 36.3 bits (80), Expect = 0.66
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 71 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+Q+ V GY P+PIQAQ P ++GK+++ A+
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQ 46
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/85 (44%), Positives = 49/85 (57%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
G AL+L PTRELA QI + + +R GG +R Q RD+ G IV+ATPG
Sbjct: 72 GVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGANIVVATPG 131
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL DF+ +G NL L+LDE+D
Sbjct: 132 RLYDFMSRGLINLTTVRMLILDESD 156
Score = 49.6 bits (113), Expect = 7e-05
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +2
Query: 446 FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
F+ +G LT V + RMLDMGF P I++II + +RQTL++SAT VK+L
Sbjct: 136 FMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLFSATLESSVKQLV 195
Query: 626 E 628
E
Sbjct: 196 E 196
Score = 33.1 bits (72), Expect = 6.2
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +1
Query: 85 KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGEVRL 264
K+N + T S + + + K+ +QTG+GKTLA++LP I ++ +P R+ VR
Sbjct: 19 KNNFTEPTPIQSLA-IEPALAGKDIVATAQTGTGKTLAFLLPTIQLLSTEP--RQPGVRA 75
Query: 265 L 267
L
Sbjct: 76 L 76
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP LVL PTREL Q++ DFG + VR+T + GG +Q DL G +IVIAT G
Sbjct: 70 GPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRAGTDIVIATVG 129
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+DF+++ L L+LDE D
Sbjct: 130 RLMDFIKEKEIRLDSVEVLILDEVD 154
Score = 43.2 bits (97), Expect = 0.006
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F + P + +GV+ MGY +PTP+Q + P+ ++G++LV A+
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQ 46
Score = 39.1 bits (87), Expect = 0.094
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
RMLDMGF +++I+ RQTL +SAT P E++ +A
Sbjct: 155 RMLDMGFINDVKRIVGLCPKQRQTLFFSATIPPEIEDVA 193
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/84 (48%), Positives = 54/84 (64%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P ALVLAPTRELA QIQ+ A + + + VFGG +Q R LE+ V++VI TPGR
Sbjct: 200 PRALVLAPTRELAMQIQKDAEVLEIFTGLTSVVVFGGMDHEKQRRSLEQPVDLVIGTPGR 259
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
+ID+ G+ L + LV+DEAD
Sbjct: 260 IIDYSRGGSLKLSKVEVLVIDEAD 283
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI--RPDRQTLMWSATWPKEVKKLAEGLLGE 643
RMLDMGF P +++I+ Q+ + +RQTL++SAT + +LA G L E
Sbjct: 284 RMLDMGFIPDVKRIVSQLPRKGERQTLLFSATLEDHILRLASGWLAE 330
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ALVLAPTRELA QI +G +R+ ++GG + Q + L+RG I++ATPGR
Sbjct: 76 PLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVATPGR 135
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D + +G L + VLDEAD
Sbjct: 136 LLDLMNQGHIKLNQLEVFVLDEAD 159
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/65 (38%), Positives = 40/65 (61%)
Frame = +2
Query: 449 LGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
+ +GH +L + +F RMLDMGF P +++II Q+ RQ+L +SAT ++ +LA
Sbjct: 140 MNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQRQSLFFSATLAPKITELAH 199
Query: 629 GLLGE 643
LL +
Sbjct: 200 SLLSK 204
Score = 37.9 bits (84), Expect = 0.22
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F+E VQ+ + YK PTPIQAQ P A+ G++++G A+
Sbjct: 4 FQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQ 47
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/92 (41%), Positives = 56/92 (60%)
Frame = +3
Query: 234 TAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 413
++ SE P+ALV+APTRELA QIQ+ A F + ++ ++GG R +++
Sbjct: 424 SSLSEVQAPLALVIAPTRELAVQIQKEARKFAQNTSIKPVVIYGGVQVAYHLRQVQQDCH 483
Query: 414 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+++ TPGRL DFL K +L YL+LDEAD
Sbjct: 484 LLVGTPGRLKDFLGKRKISLANLKYLILDEAD 515
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGF P+I+ II + DR TLM+SAT+P E++ LA L + +I
Sbjct: 516 RMLDMGFLPEIKAIINDFDMPPKEDRHTLMFSATFPTEIQNLAAEFLNNYVYLTI 570
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
VT G+ + + I+ F EAN + + V+ Y +PTP+Q PI ++L+ A+
Sbjct: 342 VTGPGI-IPSAIREFAEANIDRTILENVEKAHYIKPTPVQKYAIPIITGNRDLMSCAQ 398
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P L+LAPTREL QI F S + C++GG + Q L +G +I+IA PGR
Sbjct: 205 PKCLILAPTRELTLQIYDQFQKFSVGSQLYAACLYGGQDRYIQKSQLRKGPQILIACPGR 264
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
LID L++G T L++ ++LVLDEAD
Sbjct: 265 LIDLLDQGCTTLKQVSFLVLDEAD 288
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/39 (82%), Positives = 38/39 (97%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
RMLDMGFEPQIRKI++QIRP RQT+++SATWPKEV+KLA
Sbjct: 289 RMLDMGFEPQIRKIVDQIRPQRQTMLFSATWPKEVQKLA 327
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +2
Query: 17 VEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V V +PI FE+ FP + + G+K PT IQAQGW IA++G +L+G+A+
Sbjct: 126 VTVPDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWSIALTGHDLIGIAQ 179
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHI 225
+QTGSGKTLA++LPAIVHI
Sbjct: 178 AQTGSGKTLAFLLPAIVHI 196
>UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 619
Score = 78.2 bits (184), Expect = 2e-13
Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ +++ PTRELA Q A + S +R V+GG +Q R + G +I+ ATPGR
Sbjct: 213 PLVVIVCPTRELAIQAFNEARKLCYRSMLRPGVVYGGGNFMDQIRQIGLGCDILCATPGR 272
Query: 438 LIDFLEK-GTTNLQRCTYLVLDEAD--VCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPK 608
L+ F++K NLQR Y+V+DEAD + W+ + K S AQ + PK
Sbjct: 273 LLHFMDKPELLNLQRVRYVVIDEADEMLTADWEEDMKKIMSAGGAAQEIKYLLFSATFPK 332
Query: 609 K*RNLLRDYLGRLH 650
K R+L R++L H
Sbjct: 333 KIRDLAREHLSEDH 346
Score = 37.5 bits (83), Expect = 0.29
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
P FE+A + + V GYK PTPIQA P G +++G+A+
Sbjct: 120 PALRFEDAGLHPAMLKNVDLCGYKVPTPIQAYCIPAIHKGHDVIGIAQ 167
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL+L PTRELA Q+ +V+ G S +R V+GG +Q + RG I++ TPGR +
Sbjct: 72 ALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANIIVGTPGRTL 131
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D +++G N + +Y VLDEAD
Sbjct: 132 DLIDRGILNFDKVSYFVLDEAD 153
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
MLDMGF I+KII + +RQ+ ++SAT P E+ +LA+G +
Sbjct: 155 MLDMGFIEDIKKIINVLPVERQSFLFSATIPSEIIELAKGFM 196
Score = 39.1 bits (87), Expect = 0.094
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 163
FEE N + + + ++ GY EPT +Q+ PIA++G +LV
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLV 43
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP AL++APTRELAQQI+ F + + GG EQ L G EI+IATPG
Sbjct: 391 GPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPG 450
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL D ++K + +C Y+V+DEAD
Sbjct: 451 RLKDMVDKSILVMSQCRYVVMDEAD 475
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ G + +P++ + E+ P + ++ +GYKEP+PIQ Q PI M ++L+GVAK
Sbjct: 303 IAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAK 360
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
P LVLAPTRELA Q+ + DF H V ++GG Q R L +G +IV+ TPG
Sbjct: 75 PQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPG 134
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D L++GT +L + + LVLDEAD
Sbjct: 135 RLLDHLKRGTLDLSKLSGLVLDEAD 159
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
ML MGF + I+ QI QT ++SAT P+ ++++ + E
Sbjct: 161 MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKE 204
Score = 33.5 bits (73), Expect = 4.7
Identities = 11/35 (31%), Positives = 27/35 (77%)
Frame = +2
Query: 71 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ + + +GY++P+PIQA+ P ++G++++G+A+
Sbjct: 17 ILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQ 51
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P A+V+APTRELA+Q+ + + G + V+GGA Q L RGV++V+ TPGR
Sbjct: 77 PRAIVIAPTRELAKQVAEEFSKSG--PQLSTVTVYGGAAYGPQENALRRGVDVVVGTPGR 134
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
LID LE+G +L Y VLDEAD
Sbjct: 135 LIDHLERGNLDLSAIQYAVLDEAD 158
Score = 35.9 bits (79), Expect = 0.88
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +2
Query: 449 LGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
L +G+ L+A+ ML +GF I I++Q RQT+++SAT E+ +LA
Sbjct: 139 LERGNLDLSAIQYAVLDEADEMLSVGFADAIETILQQTPAARQTMLFSATLNDEIHRLAR 198
Query: 629 GLLGE 643
L E
Sbjct: 199 KYLRE 203
Score = 34.3 bits (75), Expect = 2.7
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 73 ATRCKDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHI 225
A R + G+ + L + K+ R++TG+GKTLA+ LP I ++
Sbjct: 12 AARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNL 62
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/81 (46%), Positives = 52/81 (64%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 446
LVL PTRELA Q+++ + + + T V+GG +Q DL+RGV++V ATPGRL+D
Sbjct: 205 LVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDVVAATPGRLLD 264
Query: 447 FLEKGTTNLQRCTYLVLDEAD 509
+E+GT L LVLDE D
Sbjct: 265 HIEQGTMTLADVEILVLDEVD 285
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF P +++I++Q RQTL +SAT P E+ +LA L
Sbjct: 286 RMLDMGFLPDVKRIVQQCPQARQTLFFSATLPPELAQLASWAL 328
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V+ VE+ F + D + V MGY EPTPIQAQ P ++G+++ G A+
Sbjct: 123 VTPVEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQ 178
>UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=6;
Trypanosomatidae|Rep: Nucleolar RNA helicase II,
putative - Leishmania major
Length = 674
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/95 (45%), Positives = 53/95 (55%)
Frame = +3
Query: 225 KQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 404
K P+ + GP A++ PTRELA Q+Q V V T ++GG Q R L
Sbjct: 150 KLPSHLTRGRGPAAVIFCPTRELAIQVQDVLCGISCGLVV--TALYGGVAYANQERVLRS 207
Query: 405 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
GV+IV+ATPGR DFLEKGT + R LDEAD
Sbjct: 208 GVDIVVATPGRAKDFLEKGTLHFDRVVMACLDEAD 242
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/89 (47%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE-----RGVEIVI 422
P+ALVLAPTRELA QI Q A FG + GG +E ++ RGV IV+
Sbjct: 264 PLALVLAPTRELALQITQEAEKFGKQLGFNVLSIIGGRQYQETMDQIDNMIVGRGVHIVV 323
Query: 423 ATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
TPGRL+D +E+ N +C YLV+DEAD
Sbjct: 324 GTPGRLLDSVERKILNFSKCYYLVMDEAD 352
Score = 41.1 bits (92), Expect = 0.023
Identities = 15/58 (25%), Positives = 36/58 (62%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+T G ++ + + ++E+ + +K+ G+++PTP+Q PI++ +++VGVA+
Sbjct: 173 ITTKGKKIPHATRSWDESGLDPKILASLKSFGFRQPTPVQRASIPISLELRDVVGVAE 230
>UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and RNA
helicases; n=1; Bifidobacterium longum DJO10A|Rep:
COG0513: Superfamily II DNA and RNA helicases -
Bifidobacterium longum DJO10A
Length = 670
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/84 (47%), Positives = 48/84 (57%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P LVLAPTRELA QI V HT + T V+GG Q RDL+ G +IV+A PGR
Sbjct: 110 PRGLVLAPTRELANQINDVLMPLAHTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGR 169
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D L + L +V+DEAD
Sbjct: 170 LEDLLRQQALTLSSVEVVVIDEAD 193
Score = 39.5 bits (88), Expect = 0.071
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
M DMGF P +++++EQI PD Q +++SAT V ++ L
Sbjct: 195 MADMGFLPPVKRLLEQISPDAQHMLFSATLDHGVDEVVNTFL 236
>UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=3;
Bifidobacterium|Rep: Possible ATP-dependent RNA helicase
- Bifidobacterium longum
Length = 728
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/84 (47%), Positives = 48/84 (57%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P LVLAPTRELA QI V HT + T V+GG Q RDL+ G +IV+A PGR
Sbjct: 126 PRGLVLAPTRELANQINDVLMPLAHTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGR 185
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D L + L +V+DEAD
Sbjct: 186 LEDLLRQQALTLSSVEVVVIDEAD 209
Score = 39.5 bits (88), Expect = 0.071
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
M DMGF P +++++EQI PD Q +++SAT V ++ L
Sbjct: 211 MADMGFLPPVKRLLEQISPDAQHMLFSATLDHGVDEVVNTFL 252
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/85 (48%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQ-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
P+ALV+APTRELA Q++ +++ +G V +CV GG R++ R LERG IV+ATPG
Sbjct: 77 PLALVIAPTRELALQVKRELSWLYGDAGAVLASCV-GGMDMRDERRALERGAHIVVATPG 135
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL D + +G+ +L +VLDEAD
Sbjct: 136 RLRDHITRGSIDLSGVAAVVLDEAD 160
Score = 39.5 bits (88), Expect = 0.071
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
MLD+GF + I+E+ DRQTL++SAT K + LA+
Sbjct: 162 MLDLGFREDLEFILEETPEDRQTLLFSATVSKPIAALAQ 200
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 77.4 bits (182), Expect = 3e-13
Identities = 46/102 (45%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Frame = +3
Query: 225 KQPTAYSER*GPIALVLAPTRELAQQIQQVAADF-------GHTSYVRNTCVFGGAPKRE 383
K P SE GP L++ P+RELA+QI + + G C+ GG P E
Sbjct: 258 KLPFMRSE--GPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI-GGVPIGE 314
Query: 384 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
QA+D+ G+ IV+ATPGRL D L K NL+ C YLVLDEAD
Sbjct: 315 QAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEAD 356
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFE +I+ I + RQTL++SAT P++++ A+ L
Sbjct: 357 RMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSAL 399
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
++ G + PI F E FP + + + K G PT IQ QG P+A+SG++++G+A
Sbjct: 177 ISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIA 234
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Frame = +3
Query: 213 HCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 392
H H++P ++ GPI+++L PTREL+ Q++ A + + V+GG+ Q +
Sbjct: 784 HVLHQEPLRNND--GPISIILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLK 841
Query: 393 DLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEAD 509
L++GVEI++ TPGR+ID L TNL R +++VLDEAD
Sbjct: 842 VLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEAD 883
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
R+LD+GFE QI I+ R D+QT M SAT+P ++ +A+ LL
Sbjct: 884 RLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKKLL 926
Score = 38.3 bits (85), Expect = 0.16
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTL+Y+ P I H+ +Q P+R +
Sbjct: 767 AETGSGKTLSYLFPVIRHVLHQEPLRNND 795
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/84 (45%), Positives = 52/84 (61%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P A+++APTREL QI A F + + VR V+GG Q R++ +G IV TPGR
Sbjct: 356 PEAIIVAPTRELINQIFLEARKFAYGTCVRPVVVYGGVNTGFQLREISKGCNIVCGTPGR 415
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D +++G L + YLVLDEAD
Sbjct: 416 LLDVIQRGWIGLTKLRYLVLDEAD 439
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/47 (46%), Positives = 35/47 (74%), Gaps = 4/47 (8%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGFEP +R+++ + +RQTL++SAT+P++++KLA L
Sbjct: 440 RMLDMGFEPDMRRLVASPGMPPKENRQTLLFSATYPQDIQKLAADFL 486
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 77.0 bits (181), Expect = 4e-13
Identities = 34/82 (41%), Positives = 55/82 (67%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
+L++ PTRELA QI + +G + + +T +FGG + Q L++G++I+IATPGRL+
Sbjct: 158 SLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATPGRLL 217
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + +G +L+ + VLDEAD
Sbjct: 218 DLMNQGHLHLRNIEFFVLDEAD 239
Score = 59.7 bits (138), Expect = 6e-08
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Frame = +2
Query: 26 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTS 205
H F + + Q ++ GY+ PTPIQA+ P+ + G +L+G A+ K +
Sbjct: 78 HTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFA 137
Query: 206 C---QPLCT*TTNRLFGEVRSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS* 376
Q L TN ++RS + + ++ S + H + V +
Sbjct: 138 IPVLQLLNAVKTNEKKRKIRS--LIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQ 195
Query: 377 KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIE 556
+ L +G + + +GH L + F RMLDMGF IRKI+
Sbjct: 196 NPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILA 255
Query: 557 QIRPDRQTLMWSATWPKEVKKLAEGLL 637
++ +Q+L +SAT P E+ +LA +L
Sbjct: 256 ELPKKKQSLFFSATMPPEITRLAASIL 282
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
+L+L PTRELA QIQ+ +G +R+ +FGG ++ Q L++GV+I++ATPGRL+
Sbjct: 75 SLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKKGVDILVATPGRLL 134
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D +G +L R VLDEAD
Sbjct: 135 DLQGQGFVDLSRLEIFVLDEAD 156
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/62 (41%), Positives = 37/62 (59%)
Frame = +2
Query: 452 GKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEG 631
G+G L+ + IF RMLDMGF +R++++ + +QTL +SAT P EV L G
Sbjct: 138 GQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTLFFSATMPPEVMDLVNG 197
Query: 632 LL 637
LL
Sbjct: 198 LL 199
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F E + + + +GY++P+PIQ + P A++G++++G A+
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQ 46
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 77.0 bits (181), Expect = 4e-13
Identities = 43/86 (50%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 431
GP LVL PTRELAQQ+ Q A + T VR V GG P +Q L RG IV+ TP
Sbjct: 76 GPECLVLCPTRELAQQVSQDAINLVKFTKGVRVATVVGGMPYGKQMASL-RGARIVVGTP 134
Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
GRL+D ++G NL T L++DEAD
Sbjct: 135 GRLLDLAQQGKLNLSTVTTLIVDEAD 160
Score = 36.3 bits (80), Expect = 0.66
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDR-QTLMWSATWPKEVKKLAEGLL 637
RMLD+GF + + I+Q+ +R QTLM+SAT+ K + LAE ++
Sbjct: 161 RMLDLGFSEDL-EAIDQLCGNRIQTLMFSATFAKRIIGLAENIM 203
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P LVLAPTREL QQ +V + G VR +GGAP+ QAR L G + ++A PGR
Sbjct: 163 PSVLVLAPTRELVQQTTKVFQNLG-CGQVRVCEAYGGAPRDLQARHLRNGCDALVACPGR 221
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L DFL+ G +++ ++LV DEAD
Sbjct: 222 LKDFLDGGDVSIRNLSFLVFDEAD 245
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI--RPDRQTLMWSATWPKEVKKLAEGLLGE 643
R+LDMGF+ + +I+ + QT+MWSATWP+ V+ +A L +
Sbjct: 246 RLLDMGFQVHLDEIMAYLDSASHPQTMMWSATWPESVQAMARKYLSD 292
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 76.6 bits (180), Expect = 5e-13
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADF-------GHTSYVRNTCVFGGAPKREQARDLERGVE 413
GP +++ P+RELA+Q +V F G S N C+ GG+ +EQ+ ++RGV
Sbjct: 123 GPYGMIVVPSRELARQTFEVITHFSRALEAHGFPSLRTNLCI-GGSSIKEQSDAMKRGVH 181
Query: 414 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+V+ATPGRL+D L+K L C YLVLDEAD
Sbjct: 182 MVVATPGRLMDLLDKRIITLDVCRYLVLDEAD 213
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
+ V G ++ P++ F+E FP + +K G PTPIQ QG P ++G++++G+A
Sbjct: 35 ILVEGDDIPPPVKTFKEMKFPRPILAALKKKGITHPTPIQVQGLPAVLTGRDMIGIA 91
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM+DMGFE +R I + RQTL++SAT PK+++ A+ L
Sbjct: 214 RMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSAL 256
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 76.6 bits (180), Expect = 5e-13
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P AL+LAPTRELA QI A FG +R ++GG +Q L +G ++VIATPGR
Sbjct: 85 PRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDKQREMLRKGADVVIATPGR 144
Query: 438 LIDFLEK-GTTNLQRCTYLVLDEAD 509
LID+L++ +L+ C VLDEAD
Sbjct: 145 LIDYLKQHEVVSLRVCEICVLDEAD 169
Score = 33.9 bits (74), Expect = 3.5
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI--RPDRQTLMWSATWPKEVKKLAEGLLGE 643
RM D+GF IR I+ ++ R RQTL++SAT V +LA + E
Sbjct: 170 RMFDLGFIKDIRFILRRLPERCSRQTLLFSATLSHRVLELAYEYMNE 216
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 76.6 bits (180), Expect = 5e-13
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P LVLAPTRELA+Q+++ + Y+ CV+GG Q L RGV++V+ TPGR
Sbjct: 181 PKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGR 238
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
+ID +E + L YLVLDEAD
Sbjct: 239 IIDLIEGRSLKLGEVEYLVLDEAD 262
Score = 40.3 bits (90), Expect = 0.041
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
+ML +GFE + I+E + RQ++++SAT P VKKLA L
Sbjct: 263 QMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYL 305
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 76.6 bits (180), Expect = 5e-13
Identities = 38/81 (46%), Positives = 54/81 (66%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 446
LV++PTRELA QI ++ CV+GG PK EQ L++ ++V+ATPGRL+D
Sbjct: 186 LVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLD 244
Query: 447 FLEKGTTNLQRCTYLVLDEAD 509
L++G+ +L + YLVLDEAD
Sbjct: 245 LLQEGSVDLSQVNYLVLDEAD 265
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/40 (57%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPD-RQTLMWSATWPKEVKKLA 625
RML+ GFE I+ II + RQTLM++ATWPKEV++LA
Sbjct: 266 RMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELA 305
Score = 39.9 bits (89), Expect = 0.054
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
P+ F+ + +Q + + +PTPIQA WP +SGK++VGVA+
Sbjct: 112 PLLSFDYLSLDSSIQAEISK--FPKPTPIQAVAWPYLLSGKDVVGVAE 157
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 76.2 bits (179), Expect = 7e-13
Identities = 40/82 (48%), Positives = 50/82 (60%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVLAPTRELA QI A +G + V GGA QAR +E GV++++ATPGRL+
Sbjct: 133 ALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRMESGVDLLVATPGRLL 192
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + G L +VLDEAD
Sbjct: 193 DHVAAGVIRLDAVETVVLDEAD 214
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
+MLD+GF P IR+I+ ++ RQ +M+SAT PK ++ LA
Sbjct: 215 QMLDLGFIPAIRQIMAKLPRQRQAVMFSATMPKPIRALA 253
Score = 35.9 bits (79), Expect = 0.88
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 77 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ + Y+ PTPIQA+ P+ + G +LVG+A+
Sbjct: 70 RAISEQSYETPTPIQARSIPVMLEGHDLVGIAQ 102
>UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putative;
n=2; Theileria|Rep: DEAD-box family (RNA) helicase,
putative - Theileria annulata
Length = 797
Score = 76.2 bits (179), Expect = 7e-13
Identities = 38/84 (45%), Positives = 51/84 (60%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ LVL+PTRELA Q + F + +R ++GG+ R Q +LERG +I +ATPGR
Sbjct: 330 PVCLVLSPTRELAVQTYTESRKFNFGTGIRTVVLYGGSEVRRQLIELERGCDICVATPGR 389
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D +E+ YLVLDEAD
Sbjct: 390 LTDLVERRKIVFSCIKYLVLDEAD 413
Score = 33.1 bits (72), Expect = 6.2
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +2
Query: 572 RQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RQT+M+SAT+PKE+++LA L + + ++
Sbjct: 506 RQTVMFSATFPKEIQQLAREFLNDYIYLAV 535
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P AL++ PTREL Q+ + G V+ V+GG Q L RGV +++ATPGR
Sbjct: 72 PQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHVIVATPGR 131
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
LID +E+GT +L + +VLDEAD
Sbjct: 132 LIDHIERGTVDLGGISTVVLDEAD 155
Score = 34.3 bits (75), Expect = 2.7
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
ML+MGF I +I+ + RQT+++SAT K + ++A
Sbjct: 157 MLNMGFIDDIERILSHVPERRQTMLFSATVSKPILRIA 194
Score = 33.5 bits (73), Expect = 4.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F E + + + + MG++ TPIQA P+ + G ++VG A+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQ 49
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 76.2 bits (179), Expect = 7e-13
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRL 440
LV+APTRELA Q ++ A G + + C++GG K+EQ R L + V IV+ TPGR+
Sbjct: 243 LVIAPTRELAIQTEENMAKLGKSMGIGMICLYGGVSKQEQVRLLNQSPPVRIVVGTPGRV 302
Query: 441 IDFLEKGTTNLQRCTYLVLDEAD 509
+D G+ +L TYLVLDEAD
Sbjct: 303 LDMARDGSLDLSGVTYLVLDEAD 325
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRP---DRQTLMWSATWPKEVKKLAEGLL 637
RMLD GFEP IR II + R T M+SATWP V+ LAE +
Sbjct: 326 RMLDKGFEPDIRAIIGMCKSREEGRHTSMFSATWPPAVRGLAESFM 371
Score = 38.7 bits (86), Expect = 0.12
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +2
Query: 71 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V++ + + G+ PTPIQA WP+ + K++VG+A+
Sbjct: 170 VKKTLDSQGFSTPTPIQACCWPVLLQNKDVVGIAE 204
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 75.8 bits (178), Expect = 9e-13
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P AL+LAPTRELAQQ+ + + + V+GG R Q L +GV+I+IATPGR
Sbjct: 78 PRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQLAKGVDILIATPGR 137
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D L T+L + LVLDEAD
Sbjct: 138 LLDHLFTKKTSLNQLQMLVLDEAD 161
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RMLDMGF P I++I++++ +RQTL++SAT+ VK LA L+ E
Sbjct: 162 RMLDMGFLPDIQRIMKRMPEERQTLLFSATFETRVKALAYRLMKE 206
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP AL+L PTRELA Q V G ++ + GG + +Q + + GV+I++AT G
Sbjct: 90 GPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSVSDGVDIIVATHG 149
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D + + L+ TYLVLDEAD
Sbjct: 150 RLLDLVMQADLVLEHLTYLVLDEAD 174
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 75.8 bits (178), Expect = 9e-13
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALV+ PTRELA QI + + S +R+T VFGG Q L +GV+I++ATPGRLI
Sbjct: 78 ALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKEILAKGVDILVATPGRLI 137
Query: 444 DFLEKGTTNLQRCTYLVLDEADV 512
D +G +L + VLDEAD+
Sbjct: 138 DLQMQGNIDLSQLEIFVLDEADL 160
Score = 39.1 bits (87), Expect = 0.094
Identities = 22/65 (33%), Positives = 39/65 (60%)
Frame = +2
Query: 455 KGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGL 634
+G+ L+ + IF MLDMGF I+KI + +QTL++SAT P+++ +L++ +
Sbjct: 142 QGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRKKQTLLFSATIPEKIDELSKSI 201
Query: 635 LGETT 649
+ T
Sbjct: 202 VKNAT 206
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVL PTRELA Q+ + +G +R+ VFGG P Q + L GV++++ATPGRL+
Sbjct: 76 ALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLL 135
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D ++ + LVLDEAD
Sbjct: 136 DLEQQKAVKFNQLEVLVLDEAD 157
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RMLDMGF I+KI+ + RQ LM+SAT+ E+++LA+GL+ +
Sbjct: 158 RMLDMGFIRDIKKILAMLPAKRQNLMFSATFSDEIRELAKGLVNQ 202
Score = 36.3 bits (80), Expect = 0.66
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 71 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+Q+ V GY P+PIQAQ P ++GK+++ A+
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQ 46
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 75.8 bits (178), Expect = 9e-13
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P ++++PTRELA QI + A F H S +++ V+GG Q L G I++ TPGR
Sbjct: 487 PEVVIISPTRELAIQIHREARKFSHNSVLKSVIVYGGTQVSHQKSSLMNGCNILVGTPGR 546
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L DF++KG + + +LDEAD
Sbjct: 547 LKDFVDKGFIDFSNVQFFILDEAD 570
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
V+G V N I FE A D V Q +K GY +PTP+Q + ++ ++L+ A
Sbjct: 399 VTGNNVPNYITSFETAGLRDLVLQNIKASGYTKPTPVQKGAIAVVLARRDLIASA 453
Score = 37.9 bits (84), Expect = 0.22
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 446 FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQ--IRP--DRQTLMWSATWPKEV 613
F+ KG + V F RMLDMGF I I + + P R TLM+SAT+P +V
Sbjct: 550 FVDKGFIDFSNVQFFILDEADRMLDMGFGSDIEFIAQHPTMTPVGRRVTLMFSATFPDDV 609
Query: 614 KKLAEGLLGETTF 652
+K+A L + F
Sbjct: 610 QKIAGKYLHDYVF 622
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/87 (42%), Positives = 55/87 (63%)
Frame = +3
Query: 249 R*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 428
R G ALVL PTRELA QI + +G + +++ +FGG ++ Q L G++I++AT
Sbjct: 69 RKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVAT 128
Query: 429 PGRLIDFLEKGTTNLQRCTYLVLDEAD 509
PGRL+D + +G +L + VLDEAD
Sbjct: 129 PGRLLDLISQGFISLSSLDFFVLDEAD 155
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +2
Query: 449 LGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
+ +G L+++ F RMLDMGF I++I++ + RQTL +SAT P E++ LA
Sbjct: 136 ISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQTLFFSATMPPEIETLAN 195
Query: 629 GLL 637
+L
Sbjct: 196 SML 198
Score = 41.9 bits (94), Expect = 0.013
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
FE N + + + ++ GY PTPIQ Q PI + GK+L+G A+
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQ 46
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
+L+L PTRELA QI Q D+ ++ V+GG ++ Q +E G++I++ATPGRL+
Sbjct: 78 SLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLL 137
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D +E G N + VLDEAD
Sbjct: 138 DLIETGDINFKALEVFVLDEAD 159
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETT 649
MLDMGF ++ II ++ RQTL++SAT P E++ LAE +L + T
Sbjct: 161 MLDMGFFKDVQSIISKLPKSRQTLLFSATMPAEIEILAEAILTDPT 206
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 83 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V GYK+PTPIQ + P ++G +L+G+A+
Sbjct: 17 VNLKGYKQPTPIQKECIPALINGNDLLGIAQ 47
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/84 (42%), Positives = 50/84 (59%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P LVL PTRELA Q+ G + +R + V GG P Q L+RG++++IATPGR
Sbjct: 220 PRGLVLVPTRELAMQVADALRPLGDSLDLRLSVVVGGVPYGRQIAALQRGIDVLIATPGR 279
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D +++ +L VLDEAD
Sbjct: 280 LVDLIDRDAVSLAEVDVAVLDEAD 303
Score = 37.1 bits (82), Expect = 0.38
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRS 658
M D+GF P +R I+E +P Q + +SAT + V+ L L + F +
Sbjct: 305 MADLGFLPNVRAILEGTKPGGQRMFFSATLDRGVEALVTDFLTDPAFHA 353
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 75.4 bits (177), Expect = 1e-12
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P +VLAPTRELA QI A F + R+ ++GGA K +Q R L G ++V+ATPGR
Sbjct: 173 PSVIVLAPTRELAIQIHDECAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGR 232
Query: 438 LIDFLE--KGTT---NLQRCTYLVLDEAD 509
L DFLE G T + + Y+VLDEAD
Sbjct: 233 LNDFLEPPPGFTAPVSAVKAAYVVLDEAD 261
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
RMLDMGFEPQI+KI + RQT+M++ATWPK V+K+A+
Sbjct: 262 RMLDMGFEPQIKKIFKLCPSARQTVMFTATWPKGVQKIAD 301
Score = 56.8 bits (131), Expect = 4e-07
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
P F++A FP +++ +K GY PTPIQA+ WPI + GK++V +AK
Sbjct: 84 PYVTFDDAKFPAALRKALKAQGYDAPTPIQAEAWPILLKGKDVVAIAK 131
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK---REQARDLERGVEIVIATPG 434
A+++APTRELAQQI Q F + V ++GG +Q R + G +IVIATPG
Sbjct: 75 AVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRGMAMGADIVIATPG 134
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLI L G+ +L +Y VLDEAD
Sbjct: 135 RLISHLNLGSADLSHVSYFVLDEAD 159
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF I +I +Q+ QT+M+SAT P +++KLA +L
Sbjct: 160 RMLDMGFFDDIMQIYKQLPSSCQTVMFSATMPPKIRKLAASIL 202
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F+E N D V G+ M + E TP+QA P + G++++ A+
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQ 46
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
P LVL PTRELA Q+ A+ +G H +R + GG +Q L + EI++ATPG
Sbjct: 138 PGLLVLTPTRELAMQVTTAASTYGKHLRRLRTVSILGGVAYGQQLMLLAKNPEILVATPG 197
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D LE+G +L LVLDEAD
Sbjct: 198 RLLDHLERGRIDLSELKMLVLDEAD 222
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF I I+ RQT+++SAT ++ L LL
Sbjct: 223 RMLDMGFIDDIDTIVAATPATRQTMLFSATLDGKIGSLTNRLL 265
>UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10;
Streptomyces|Rep: Probable DEAD-box RNA helicase -
Streptomyces coelicolor
Length = 498
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+ LVL PTRELAQQ+ + + +R V GG QA L G E+V+ATPGR
Sbjct: 141 PLGLVLVPTRELAQQVTDALTPYARSVKLRLATVVGGMSIGRQASALRGGAEVVVATPGR 200
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D +++G L + + VLDEAD
Sbjct: 201 LKDLIDRGDCRLNQVSVTVLDEAD 224
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
+M DMGF PQ+ +++Q+RP+ Q +++SAT + V L L + S+
Sbjct: 225 QMADMGFMPQVTALLDQVRPEGQRMLFSATLDRNVDLLVRRYLSDPVVHSV 275
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 74.9 bits (176), Expect = 2e-12
Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +3
Query: 195 GLHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGA 371
GL +A+ + T P+ L++APTRELA Q+ +++ + +T+ TCV GG
Sbjct: 55 GLAIANELLGGEDTFLIRAATPLGLIIAPTRELALQVARELRWLYANTNAEIATCV-GGM 113
Query: 372 PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKS 551
R++ R LERG IV+ TPGRL+D + +G+ + +VLDEAD + DL + E
Sbjct: 114 DMRDERRALERGAHIVVGTPGRLVDHINRGSFDTSAIRAVVLDEADE--MLDLGFREELE 171
Query: 552 L 554
L
Sbjct: 172 L 172
Score = 39.9 bits (89), Expect = 0.054
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
MLD+GF ++ I+E +R+TLM+SAT PK + LA
Sbjct: 161 MLDLGFREELELILEDTPKERRTLMFSATVPKGIAALA 198
>UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=2; Actinomycetales|Rep: DEAD/DEAH box
helicase domain protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 507
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/84 (45%), Positives = 50/84 (59%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P ALVLAPTREL QI++ T+ + VFGG + Q + L RG +IV+A PGR
Sbjct: 82 PRALVLAPTRELVNQIEEALKPLARTAGLTTQTVFGGVGQNPQVQGLRRGADIVLACPGR 141
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L D + +G +L + VLDEAD
Sbjct: 142 LEDLIGQGHCDLSQVEITVLDEAD 165
Score = 39.9 bits (89), Expect = 0.054
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 449 LGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
+G+GH L+ V I M D+GF P +R+I+++ D Q L++SAT K + L +
Sbjct: 146 IGQGHCDLSQVEITVLDEADHMADLGFLPGVRRIMDRTPRDGQRLLFSATLDKAIDVLVK 205
Query: 629 GLL 637
L
Sbjct: 206 RFL 208
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 88 DNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHI 225
D G+ + ++ L DS ++ R +TGSGKT A++LP + +
Sbjct: 25 DRGIVQPTPIQAATLPDSLAGRDVLGRGRTGSGKTYAFLLPLVARL 70
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/102 (37%), Positives = 56/102 (54%)
Frame = +3
Query: 195 GLHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 374
G+ H K +++ P LVL+PTRELAQQI V + G + + C++GG
Sbjct: 147 GVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTS 206
Query: 375 KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 500
K Q L+ GV+IVI TPGR+ D +E G L ++++ D
Sbjct: 207 KGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVIAD 248
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +3
Query: 303 IQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 482
I V + G + + C++GG K Q L+ GV+IVI TPGR+ D +E G L
Sbjct: 246 IADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDV 305
Query: 483 TYLVLDEAD 509
+++VLDEAD
Sbjct: 306 SFVVLDEAD 314
Score = 56.4 bits (130), Expect = 6e-07
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSIL 664
RMLDMGFEP++R I+ Q RQT+M+SATWP V +LA+ + + ++
Sbjct: 315 RMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLAQEFMDPNPIKVVI 366
Score = 37.9 bits (84), Expect = 0.22
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
P+ F P V K G++ P+PIQA WP + G++ +G+A
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIA 136
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 74.9 bits (176), Expect = 2e-12
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Frame = +3
Query: 204 LASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 383
L H H+ ++ GPI ++L PTREL+ Q++ A+ + ++ V+GG+
Sbjct: 627 LIRHVLHQDKLRNND--GPIGIILTPTRELSIQVKNEASIYCKAVDLKILAVYGGSNIGA 684
Query: 384 QARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCTYLVLDEAD 509
Q L++GVEI++ TPGR+ID L TNL R +++VLDEAD
Sbjct: 685 QLNVLKKGVEIIVGTPGRIIDILTISNSKVTNLNRASFIVLDEAD 729
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
R+LD+GFE QI I+ R D+QT M SAT+P ++ LA+ LL
Sbjct: 730 RLLDLGFESQIHSILNNCRKDKQTAMISATFPNYIQNLAKKLL 772
Score = 33.9 bits (74), Expect = 3.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT++Y+ P I H+ +Q +R +
Sbjct: 613 AETGSGKTISYLFPLIRHVLHQDKLRNND 641
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 74.9 bits (176), Expect = 2e-12
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQ----IQQVAADFGHTSY--VRNTCVFGGAPKREQARDLERGVEI 416
GPI L++ P+RELA+Q ++Q A Y +R+ GG R Q ++RGV I
Sbjct: 222 GPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHI 281
Query: 417 VIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
V+ATPGRL D L K +L C YL LDEAD
Sbjct: 282 VVATPGRLKDMLAKKKMSLDACRYLTLDEAD 312
Score = 53.2 bits (122), Expect = 5e-06
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
+ V+G ++ PI+ F++ FP V +K G +PTPIQ QG P+ ++G++++G+A
Sbjct: 134 IIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIA 190
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
R++D+GFE IR++ + + RQTL++SAT P +++ A L
Sbjct: 313 RLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSAL 355
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 74.9 bits (176), Expect = 2e-12
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Frame = +3
Query: 195 GLHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 374
G+ + H ++P ++ GPI L+LAPTREL+ QI F + S + C +GG P
Sbjct: 564 GIPMIRHVLDQRPLKPAD--GPIGLILAPTRELSLQIVNELKPFLNASGITIKCAYGGQP 621
Query: 375 KREQARDLER-GVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEAD 509
+Q ++R G+ I+ AT GRLID L+ + + +R TY+VLDEAD
Sbjct: 622 ISDQIAMIKRGGIHILCATAGRLIDLLQSNSGRVLSFRRITYVVLDEAD 670
Score = 59.3 bits (137), Expect = 8e-08
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQ+ KI+ IRPDRQT+++SAT+PK + LA L
Sbjct: 671 RMFDMGFEPQVMKILASIRPDRQTILFSATFPKTMAALARKAL 713
Score = 41.9 bits (94), Expect = 0.013
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ V +V P+ + + +GY PT IQAQ PIA SG++L+GVAK
Sbjct: 497 IKVKPDDVPRPVTKWAQMGLLQQTMDVFTRVGYARPTAIQAQAIPIAESGRDLIGVAK 554
Score = 33.1 bits (72), Expect = 6.2
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIR 246
++TGSGKTLA+ +P I H+ +Q P++
Sbjct: 553 AKTGSGKTLAFGIPMIRHVLDQRPLK 578
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVL PTRELA Q+ + G + V+ ++GG Q R L GV++VI TPGR++
Sbjct: 77 ALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVDVVIGTPGRIL 136
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D L + T +L + +VLDEAD
Sbjct: 137 DHLGRSTLDLSQVRMVVLDEAD 158
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
MLDMGF I KI++ +RQTL++SAT P E+++LA
Sbjct: 160 MLDMGFIEDIEKILQNTPAERQTLLFSATMPPEIRRLA 197
Score = 39.5 bits (88), Expect = 0.071
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F + + V + + MG++EP+PIQAQ P + GK+++G A+
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQ 51
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/99 (41%), Positives = 56/99 (56%)
Frame = +3
Query: 213 HCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 392
H P A +R G L+L+PTRELA QI + D+ + VFGG P Q R
Sbjct: 66 HYLATNPQARPQR-GCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMR 124
Query: 393 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
L+RG +I++ATPGRL+D +++ L+ VLDEAD
Sbjct: 125 MLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEAD 163
Score = 55.2 bits (127), Expect = 1e-06
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 1/207 (0%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTSCQPLCT 223
F+ + Q + +GY +PTPIQAQ P + GK+L G+A+ K + +
Sbjct: 8 FKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIHY 67
Query: 224 *TTNRLFGEVRSDCFGLGAYQRVSTTNSASCCRFWT-HILCS*HVCVWWCS*KRASPGLG 400
TN R + + R + A C +T H+ S + R L
Sbjct: 68 LATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRMLD 127
Query: 401 EGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQT 580
G+ + + + L V +F +MLD+GF +R+I + + +RQT
Sbjct: 128 RGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQT 187
Query: 581 LMWSATWPKEVKKLAEGLLGETTFRSI 661
L +SAT PK +++L+ L + S+
Sbjct: 188 LFFSATMPKTIQELSSQFLSDPVTVSV 214
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/84 (45%), Positives = 50/84 (59%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P ALVL PTRELA Q+ + R V+GG EQ R+LE+G EI++ T GR
Sbjct: 116 PGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGGEIIVGTTGR 175
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
+ID +E+G+ L Y +LDEAD
Sbjct: 176 VIDHIERGSLELSYLRYFILDEAD 199
Score = 37.5 bits (83), Expect = 0.29
Identities = 50/205 (24%), Positives = 79/205 (38%), Gaps = 6/205 (2%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAKRVPAKRWPTSCQPLC 220
FEE + V+ G++ PTPIQA P ++G N++ A+ K T+ L
Sbjct: 48 FEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGK---TAAFGL- 103
Query: 221 T*TTNRLFGEVRSDCFGLGAYQRVSTTNSAS-----CCRFWTHILCS*HVCVWWCS*KRA 385
L E+ S C GA V T A+ + H S
Sbjct: 104 -----PLIQELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQ 158
Query: 386 SPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIR 565
L +G + + + +G +L+ + F ML+MGF I I
Sbjct: 159 LRNLEQGGEIIVGTTGRVIDHIERGSLELSYLRYFILDEADEMLNMGFVEDIESIFSHAN 218
Query: 566 PDRQTLMWSATWPKEVKKLAEGLLG 640
D + LM+SAT P+++ +A +G
Sbjct: 219 KDARVLMFSATMPRQILSIASTFMG 243
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVL PTRELA Q+ + +G + ++GG +Q R L+RGV++V+ATPGR +
Sbjct: 110 ALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVATPGRAL 169
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D L++ T L++ +VLDEAD
Sbjct: 170 DHLQRKTLKLEQVRVVVLDEAD 191
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
FE + + + +GY+EPTPIQ P + GK+L+G+A
Sbjct: 38 FESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIA 80
Score = 36.7 bits (81), Expect = 0.50
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
MLDMGF + I+ RQT ++SAT P + +AE L E
Sbjct: 193 MLDMGFAEDLEAILSSTPEKRQTALFSATLPPRIASIAERHLRE 236
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 74.5 bits (175), Expect = 2e-12
Identities = 40/105 (38%), Positives = 60/105 (57%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
G A++L+PTRELA Q +V DF + +R + GG +Q DL R +I+IATPG
Sbjct: 300 GVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDIIIATPG 359
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQ 569
RL+ L + +L + Y+V DEAD + N + + LSK ++
Sbjct: 360 RLMHHLLETGMSLSKVQYIVFDEADRLFEMGFNEQLTEILSKLSE 404
Score = 36.3 bits (80), Expect = 0.66
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 604
R+ +MGF Q+ +I+ ++ +RQTL++SAT P
Sbjct: 385 RLFEMGFNEQLTEILSKLSENRQTLLFSATLP 416
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+AL+L PTREL QQ+ ++ V GG P Q L G ++V+ATPGR
Sbjct: 114 PVALILTPTRELMQQVFMNVSEMLDVIRCPGNPVCGGVPVSTQTIALREGADVVVATPGR 173
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D ++G L + TYLV+DEAD
Sbjct: 174 LLDLCKRGALCLDKITYLVMDEAD 197
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRV 181
+ + G + PI+ F + N P + + ++ PTPIQ Q MSG++++G+A+
Sbjct: 28 IHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETG 87
Query: 182 PAKRWPTSCQPLC 220
K S PLC
Sbjct: 88 SGKTLAYSL-PLC 99
Score = 40.7 bits (91), Expect = 0.031
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPD---RQTLMWSATWPKEVKKLA 625
RML MG E Q+RKI+ RQTL+WSAT P+ +++LA
Sbjct: 198 RMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLA 239
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 74.1 bits (174), Expect = 3e-12
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
P LVLAPTRELA Q+ + + + S R V+GG +Q L+RGV +++ TPG
Sbjct: 84 PQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVHVIVGTPG 143
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK* 614
R+ID LE+GT +L LVLDEAD E+ L K + ++ P +
Sbjct: 144 RVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFSATMPPQI 203
Query: 615 RNLLRDYL 638
R + + YL
Sbjct: 204 RRIAQTYL 211
Score = 40.7 bits (91), Expect = 0.031
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 8 VSGVEVHNPIQ---YFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+SGV + NP F + D V Q V +GY+ P+PIQA P ++G++++G A+
Sbjct: 2 LSGVLMSNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQ 60
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 74.1 bits (174), Expect = 3e-12
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Frame = +3
Query: 246 ER*G-PIALVLAPTRELAQQIQ-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 419
ER G P+AL++APTRELA Q+Q ++A + H +CV G P+REQ R+L G IV
Sbjct: 69 ERAGAPLALIVAPTRELALQVQRELAWLYEHADGRVVSCVGGMDPRREQ-RELAAGAHIV 127
Query: 420 IATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+ TPGRL D L +G ++ +VLDEAD
Sbjct: 128 VGTPGRLCDHLRRGRLDISELKAVVLDEAD 157
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
ML++GF + I+E R+TL++SAT+P+ + LA+
Sbjct: 159 MLNLGFREDMEFILETTPETRRTLLFSATFPRGIVALAK 197
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVLAPTRELAQQ+ A + V+GG+ + Q L RG +V+ TPGRL+
Sbjct: 126 ALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGARVVVGTPGRLL 185
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + +G+ L + LVLDEAD
Sbjct: 186 DLIRQGSLKLDQLKTLVLDEAD 207
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
ML MGF I I+ Q DRQT+++SAT V +A L
Sbjct: 209 MLSMGFIDDIETILSQTPKDRQTMLFSATLSSRVMSIANRYL 250
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
P F + N + + +G+ +PTPIQ + P+ ++G +L+G A+
Sbjct: 53 PAVSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQ 100
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P ALVL PTRELA Q++ + G V+ VFGG P +QA L++ IV+ TPGR
Sbjct: 73 PQALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTLKQKSHIVVGTPGR 132
Query: 438 LIDFLEKGTTNLQRCTYLVLDEADV 512
++D E GT Y+++DEAD+
Sbjct: 133 VLDHCETGTLKCSNVKYVIIDEADL 157
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F + + + Q + + Y EPTPIQ + P+A+ GK+++ +K
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSK 49
>UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Rhodococcus sp. (strain RHA1)
Length = 465
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/91 (45%), Positives = 55/91 (60%)
Frame = +3
Query: 237 AYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 416
A S R P +VL PTRELA QI++ + + +R V GG P + Q L RGV++
Sbjct: 79 AASRRGFPRGIVLVPTRELALQIERALDEPALSVGLRVANVVGGIPIKRQVEILSRGVDL 138
Query: 417 VIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+IATPGRL D + +G+ +L T L LDEAD
Sbjct: 139 LIATPGRLADHVAQGSVSLDDVTVLALDEAD 169
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRS 658
M D+GF PQ+ I+++ D Q L++SAT EV L L + S
Sbjct: 171 MADLGFMPQVTTILDKTPADGQRLLFSATLDGEVDTLVRRYLRDPVTHS 219
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 440
AL+L+PTREL QI ++ + + V+GGA EQARD++RG +I++ATPGR+
Sbjct: 74 ALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGAQIIVATPGRM 133
Query: 441 IDFLEKGTTNLQRCTYLVLDEAD 509
D + + ++ + Y +LDEAD
Sbjct: 134 QDMINRRLVDISQINYCILDEAD 156
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
L++APTREL QI + H VR V+GG+ +EQAR++ RG +IV+ATPGR+
Sbjct: 74 LIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRGAQIVVATPGRMQ 133
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + + ++ + +Y VLDEAD
Sbjct: 134 DMMRRRMVDITKLSYCVLDEAD 155
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
ML+MGF I I+ D+ T ++SAT P+EV ++A+
Sbjct: 157 MLNMGFYEDITNILADTPEDKLTWLFSATMPREVARIAK 195
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P +VLAPTRELA+Q++ F + CV+GG P +Q L RGV+IV+ TPGR
Sbjct: 102 PKCIVLAPTRELAKQVENEI--FITAPTLDTACVYGGTPIGQQESKLRRGVDIVVGTPGR 159
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
++D + + +L ++VLDEAD
Sbjct: 160 IMDLMNRRALDLSEIEFVVLDEAD 183
Score = 36.7 bits (81), Expect = 0.50
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
+ML++GFE + I+ RQT ++SAT P+ VK++ + L
Sbjct: 184 QMLNVGFEEDVEAILHDCPAGRQTFLFSATMPQWVKQITKKFL 226
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL+LAPTRELA Q+ + + + V+GG Q R+L RGV+IV+ TPGR++
Sbjct: 74 ALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGVQIVVGTPGRIL 133
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + + T L+ +Y+VLDEAD
Sbjct: 134 DHISRRTIKLENVSYVVLDEAD 155
Score = 37.5 bits (83), Expect = 0.29
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
ML+MGF + +I++ + +++ L++SAT P + KLA+ + E
Sbjct: 157 MLNMGFIDDVEEILKSVSTEKRMLLFSATLPDSIMKLAKNYMRE 200
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
G +L+LAPTRELA Q+ + +F V+ VFGG P Q + L++G +IV+ TPG
Sbjct: 69 GVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPG 128
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
R+ID L + T L+LDEAD
Sbjct: 129 RVIDHLNRRTLKTDGIHTLILDEAD 153
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 35 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+Q F+E D Q +++MG+KEPTPIQ P A+ G +++G A+
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQ 47
Score = 33.9 bits (74), Expect = 3.5
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRP-DRQTLMWSATWPKEVKKLAE 628
M++MGF +R I+++I RQT+++SAT PK ++ L +
Sbjct: 155 MMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQ 194
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/88 (42%), Positives = 50/88 (56%)
Frame = +3
Query: 246 ER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 425
+R P+A+VLAPTREL Q++ A G + V GG P Q +++GVE++I
Sbjct: 183 QRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIG 242
Query: 426 TPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
TPGR++D L K T L VLDE D
Sbjct: 243 TPGRVVDLLSKHTIELDNIMTFVLDEVD 270
Score = 40.7 bits (91), Expect = 0.031
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 14 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
G V P+ F P + ++T GY PTPIQ Q P A++GK+L+ A
Sbjct: 102 GSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASA 154
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 431
G ALVLAPTREL QI + A H+ +R+ + GG + Q +DLE I++ATP
Sbjct: 70 GIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNKDLEGLNGIIVATP 129
Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
GRLID ++ G+ ++ + VLDEAD
Sbjct: 130 GRLIDMIKSGSIDISNVEFFVLDEAD 155
Score = 41.1 bits (92), Expect = 0.023
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RMLDMGF IR ++ + + +QTL++SAT EV +LA L E
Sbjct: 156 RMLDMGFIQDIRWLLHKCKNRKQTLLYSATLSVEVMRLAYRFLNE 200
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
FEE + + ++ +GY E TPIQ + P + GK++ G+A+
Sbjct: 3 FEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQ 46
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +3
Query: 246 ER*GPIALVLAPTRELAQQIQQVAADFGH-TSYVRNTCVFGGAPKREQARDLERGVEIVI 422
+R P LVLAPTRELAQQ+ +G + + GG REQ L RG ++++
Sbjct: 74 QRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRGAQVIV 133
Query: 423 ATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
TPGR+ID L++G+ L LVLDEAD
Sbjct: 134 GTPGRVIDHLDRGSLKLDGLNALVLDEAD 162
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F E + P + ++T+GY+ P+ IQA+ P + G++++G A+
Sbjct: 11 FAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQ 54
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
P LVLAPTRELAQQ+ + H S V+ ++GG+ Q R L++G + V+ TPG
Sbjct: 75 PQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQWVVGTPG 134
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
R++D + +GT L+ +VLDEAD
Sbjct: 135 RVMDHIRRGTLKLEGIRAVVLDEAD 159
Score = 39.9 bits (89), Expect = 0.054
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETT 649
ML MGF + +++Q+ RQ ++SAT PK++K +AE L E T
Sbjct: 161 MLRMGFIDDVDWVLDQVPEKRQIALFSATMPKQIKAVAEKHLREPT 206
Score = 36.7 bits (81), Expect = 0.50
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F P + + ++ GY++P+PIQ Q P + GK+++G+A+
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQ 51
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/82 (42%), Positives = 49/82 (59%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVL PTRELA Q+ + + ++ ++GG Q R L R EI++ TPGRL+
Sbjct: 74 ALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEIIVGTPGRLM 133
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + +GT +L Y+VLDEAD
Sbjct: 134 DHMNRGTISLSPLKYVVLDEAD 155
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 622
MLDMGF P I+KI+ Q +RQT ++SAT P EV++L
Sbjct: 157 MLDMGFLPDIQKILSQCPRERQTFLFSATLPDEVREL 193
Score = 35.9 bits (79), Expect = 0.88
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 77 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
Q + G+++PTPIQ + PIAM+G +L+G A+
Sbjct: 17 QMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQ 49
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVL PTRELA Q+ + ++G +++T VFGG Q L RG +I+IATPGR++
Sbjct: 80 ALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALRRGADILIATPGRMM 139
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + + LVLDEAD
Sbjct: 140 DLYNQKAVRFDKLEVLVLDEAD 161
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF I+KI+ + RQ L++SAT+ E+++LA+GL+
Sbjct: 162 RMLDMGFIHDIKKILAILPKKRQNLLFSATFSPEIRQLAKGLV 204
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/84 (42%), Positives = 48/84 (57%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P AL+L PTRELA Q++ A H + V+GG P R Q L+R IV+ TPGR
Sbjct: 75 PQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGR 134
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
+ID + + L+ +VLDEAD
Sbjct: 135 VIDLMTRRALQLEMLRTVVLDEAD 158
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
RMLD+GF P I KI+ + +RQTL+ SAT P ++KLA+
Sbjct: 159 RMLDIGFRPDIEKILRRCPEERQTLLLSATVPPTIEKLAQ 198
>UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_15_15676_17025 - Giardia lamblia
ATCC 50803
Length = 449
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+A++L+PTREL QQI + + + V+GG REQ L++G +IVIATPGR
Sbjct: 48 PLAVILSPTRELTQQIAFMCYQLTFKTNLIVRLVYGGEGAREQRGLLKKGCDIVIATPGR 107
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L DFLE+ +L+ +VLDEAD
Sbjct: 108 LKDFLERRCLSLKYVRVMVLDEAD 131
Score = 38.3 bits (85), Expect = 0.16
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI-------RPDRQTLMWSATWPKEVKKLAEGLL 637
+MLDMGFEPQIR ++ + +RQTLM+SAT+ V+ +A+ L
Sbjct: 132 KMLDMGFEPQIRDLVYKFDMPGNGPNGNRQTLMFSATFGTGVQAMAKRYL 181
>UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 605
Score = 73.7 bits (173), Expect = 4e-12
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQ-----VAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 419
GP AL+LAPTRELAQQIQ ++ + + + C+ GG E + DL +G +I+
Sbjct: 266 GPKALILAPTRELAQQIQAEIKKILSLSSNELTKITSICIVGGHSIEEISYDLSKGCDIL 325
Query: 420 IATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+ATPGRLID LE + +VLDEAD
Sbjct: 326 VATPGRLIDCLESHLIVIDNVNTIVLDEAD 355
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = +2
Query: 509 RMLDMGFEPQIRKI-----IEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
+M+D GFE Q+ I I +++ + Q +M++AT ++++A G L ++ SI
Sbjct: 356 KMIDFGFEDQVTTILSKLQINEMKDNLQKIMFTATMTPTIERIANGYLRNASYVSI 411
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P ++++PTRELA QI A F SY++ V+GG R Q + RG +VIATPGR
Sbjct: 319 PQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGR 378
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+DF+++ + ++VLDEAD
Sbjct: 379 LLDFVDRTFITFEDTRFVVLDEAD 402
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V V+G +V PIQ+F A+ D + V GYK PTPIQ P+ SG++L+ A+
Sbjct: 233 VKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQ 290
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI--RPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGF +R+I+ + RP+ QTLM+SAT+P+E++++A L F +I
Sbjct: 403 RMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAI 455
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +3
Query: 243 SER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 422
+E+ P A++L PTRELA Q+ +G ++ V GG Q LERGV++++
Sbjct: 128 TEKHKPRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALERGVDVLV 187
Query: 423 ATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
ATPGRL D + +G +L+ VLDEAD
Sbjct: 188 ATPGRLRDIINRGACSLENVQIAVLDEAD 216
Score = 37.1 bits (82), Expect = 0.38
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
+M D+GF P++ ++++Q+ Q +++SAT E+K L + L + +
Sbjct: 217 QMSDLGFLPEVTELLDQVPAGGQRMLFSATMENEIKTLVDRYLKDPALHEV 267
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P AL+L+PTRELA QI + + + + GG Q + +RGV++V+ATPGR
Sbjct: 301 PRALILSPTRELAMQIADALSSLASSMGLSTILIAGGMSYGPQTKAFKRGVDLVVATPGR 360
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D LE G +L VLDEAD
Sbjct: 361 LVDLLETGDADLSGVAVTVLDEAD 384
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 73.3 bits (172), Expect = 5e-12
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADF--GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 431
P LVLAPTRELA Q+ + GH +++ V+GG R Q L RGV++V+ TP
Sbjct: 140 PQVLVLAPTRELAMQVADSFKAYAAGHP-HLKVLAVYGGTDFRSQISTLRRGVDVVVGTP 198
Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
GR++D + +GT + T LVLDEAD
Sbjct: 199 GRVMDHMRQGTLDTSGLTSLVLDEAD 224
Score = 40.3 bits (90), Expect = 0.041
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
ML MGF + I+EQ+ +RQ +++SAT P E+++L++ L +
Sbjct: 226 MLRMGFIDDVEWILEQLPKERQVVLFSATMPPEIRRLSKRYLND 269
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
P F+ F + + + + GY +P+PIQ +P M G++LVG A+
Sbjct: 69 PQSGFDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQ 116
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/101 (36%), Positives = 55/101 (54%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P LVL PTRELA Q+ + + C+FGG Q + + +GV++++A PGR
Sbjct: 80 PRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNPQVQAMAKGVDVLVACPGR 139
Query: 438 LIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSK 560
L+D +G+ +L R LVLDEAD H +K L++
Sbjct: 140 LLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLAR 180
Score = 46.0 bits (104), Expect = 8e-04
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +2
Query: 452 GKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEG 631
G+G L+ V I RMLDMGF ++K++ ++ RQ L++SAT+ K++ LA+
Sbjct: 145 GQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLARLPAKRQNLLFSATFSKDITDLADK 204
Query: 632 LL 637
LL
Sbjct: 205 LL 206
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 73.3 bits (172), Expect = 5e-12
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQ-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
P+AL++APTRELA Q+Q ++A +G +CV GG R + + LERG IV+ TPG
Sbjct: 75 PMALIVAPTRELALQVQRELAWLYGEARGQIASCV-GGMDPRAERKALERGCHIVVGTPG 133
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL D +E+G ++ + +VLDEAD
Sbjct: 134 RLRDHIERGALDMSQLKAVVLDEAD 158
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
MLD GF + I++ R+TL++SAT P+ + +A
Sbjct: 160 MLDFGFREDLEYILDAAPASRRTLLFSATVPRAIADIA 197
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 73.3 bits (172), Expect = 5e-12
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 PIALVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
P LVLAPTRELA Q+ +Q A + + C++GG Q R L++GV++V+ T G
Sbjct: 78 PQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQGVKVVVGTTG 137
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
R++D +EKGT L LVLDEAD
Sbjct: 138 RVMDHIEKGTLQLDNLRALVLDEAD 162
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 65 DYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
D V +K +GY+ PTPIQ P +SG++++G A+
Sbjct: 17 DIVDTVIK-LGYENPTPIQQYAIPYILSGRDVLGQAQ 52
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/84 (44%), Positives = 50/84 (59%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P L+L PTRELA Q+++ +G + + GG Q R LERG +++IATPGR
Sbjct: 78 PRTLILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKLERGADVLIATPGR 137
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D E+GT L LV+DEAD
Sbjct: 138 LLDHFERGTLLLMGVEILVIDEAD 161
Score = 41.1 bits (92), Expect = 0.023
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF P I +I + RQTL +SAT E+ KL E L
Sbjct: 162 RMLDMGFIPDIERICKLTPFTRQTLFFSATMAPEIIKLTEQFL 204
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
P+ F+ V + V+ GY PTPIQ++ P + K+++G+A+
Sbjct: 4 PLNNFDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQ 51
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 73.3 bits (172), Expect = 5e-12
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Frame = +3
Query: 249 R*GPIALVLAPTRELAQQIQQVAADFGHTSYVRN--------TCVFGGAPKREQARDLER 404
R GP LV+ P+RELA QI + F T Y+ N +CV GG ++Q ++
Sbjct: 263 REGPFGLVICPSRELASQISDITKYF--TGYIYNYGGPKLYCSCVIGGTDIKDQEFTIKS 320
Query: 405 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
GV +VIATPGRL FL NL +C YL DEAD
Sbjct: 321 GVHMVIATPGRLNYFLNSRIINLTQCRYLCFDEAD 355
Score = 39.1 bits (87), Expect = 0.094
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
+ VSG +V PI FE+ P + + + EPT IQ Q P + G++++GV+
Sbjct: 177 IDVSGDQVPPPILNFEDMKLPKPILKALNHKKIFEPTKIQMQALPSVLLGRDVIGVS 233
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
R +D+GF+ +I I QTL++SAT ++++ A+ L
Sbjct: 356 RTIDLGFDTEINGIFNHFNNQHQTLLFSATMSIKIQEFAKSAL 398
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/104 (32%), Positives = 57/104 (54%)
Frame = +3
Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
L + H K+ + P +++APTRELA QI F H + ++ +GG
Sbjct: 230 LPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAV 289
Query: 378 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+ Q + + G +++ATPGRL+DF+++G + ++VLDEAD
Sbjct: 290 QHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEAD 333
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLA 625
RMLDMGF P I K++ + RQTLM+SAT+P E+++LA
Sbjct: 334 RMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELA 376
Score = 40.7 bits (91), Expect = 0.031
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V VSG + ++ FE + + V V+ Y +PTPIQ PI ++G++L+ A+
Sbjct: 162 VRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQ 219
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 73.3 bits (172), Expect = 5e-12
Identities = 39/90 (43%), Positives = 52/90 (57%)
Frame = +3
Query: 240 YSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 419
+S P +VLAPTREL QQ +V + VR +GGAP+ QAR L G +++
Sbjct: 182 WSPNGSPRIVVLAPTRELVQQTAKVFHQLS-SGKVRVCEAYGGAPREAQARRLHNGCDVL 240
Query: 420 IATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+A PGRL DFL+ G ++LV DEAD
Sbjct: 241 VACPGRLKDFLQNGDVIFDEVSFLVFDEAD 270
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDR--QTLMWSATWPKEVKKLAEGLLGETTF 652
R+LDMGF+ Q+ I+ R QT+MWSATWP V++LA+ L + +
Sbjct: 271 RLLDMGFKVQLDDILGYFSSHRPAQTMMWSATWPPVVEQLAQEYLSQNRY 320
Score = 40.7 bits (91), Expect = 0.031
Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +2
Query: 29 NPIQYFEEA-NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
NP++ F + N PD++ +G+++ G+ TPIQ+ P+ G +++G+A
Sbjct: 114 NPVKLFSDLDNLPDWLSKGLQSSGFSCTTPIQSYTIPVLDEGHDMIGLA 162
>UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;
n=3; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 39 - Oryza sativa subsp. japonica (Rice)
Length = 625
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P A+VL PTREL +Q+ +VA H + R+T V GG+ R Q L V++V+ TPGR
Sbjct: 188 PRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGR 247
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
++D ++ G YLVLDEAD
Sbjct: 248 ILDHIKDGNMVYGDIKYLVLDEAD 271
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 73.3 bits (172), Expect = 5e-12
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +3
Query: 198 LHLASHCAHKQPTA--YSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGA 371
L + +H H TA + E P +++APTREL QI A F + VR ++GG
Sbjct: 344 LPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGT 403
Query: 372 PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
R + +G I+ ATPGRL+D + K L++ YLVLDEAD
Sbjct: 404 QLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEAD 449
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 4/47 (8%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIE----QIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF P+++K+I + RQTLM+SAT+P+E+++LA L
Sbjct: 450 RMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFL 496
Score = 39.9 bits (89), Expect = 0.054
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V VSG + I FEEAN + + GY + TP+Q PI ++G++L+ A+
Sbjct: 276 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQ 333
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER--GVEIVIATP 431
P A++++PTRELA Q + + C+FGG+ K EQ L + GV+I+ ATP
Sbjct: 258 PRAVIVSPTRELAMQTHAALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATP 317
Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
GRL DFL +G+ +L ++ VLDEAD
Sbjct: 318 GRLKDFLSEGSISLANVSFAVLDEAD 343
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRP--DRQTLMWSATWPKEVKKLAEGLL 637
RMLD GF I+ I+ P RQTLM++ATWP +++KLAE +
Sbjct: 344 RMLDRGFSEDIKLILSGCPPKEQRQTLMFTATWPLDIQKLAESYM 388
Score = 38.7 bits (86), Expect = 0.12
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +2
Query: 98 YKEPTPIQAQGWPIAMSGKNLVGVAK 175
Y PTPIQ+ WP ++SG++++G+A+
Sbjct: 199 YTNPTPIQSASWPFSLSGRDVIGIAE 224
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,213,378
Number of Sequences: 1657284
Number of extensions: 15774351
Number of successful extensions: 44315
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 39972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43665
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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