Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0817
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 126 3e-30
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 99 5e-22
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 85 7e-18
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 85 9e-18
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 71 2e-13
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 67 2e-12
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 66 4e-12
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 65 7e-12
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 63 3e-11
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 61 1e-10
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 61 1e-10
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 60 4e-10
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 60 4e-10
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 59 5e-10
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 55 1e-08
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 50 4e-07
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 50 4e-07
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 49 5e-07
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 48 1e-06
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 45 1e-05
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 42 8e-05
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 42 1e-04
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 40 4e-04
SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|c... 30 0.26
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 30 0.34
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 29 0.60
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 28 1.4
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 28 1.4
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 26 5.6
SPAC1805.06c |hem2||porphobilinogen synthase Hem2 |Schizosacchar... 26 5.6
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 25 7.4
SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 7.4
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 25 7.4
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 25 9.8
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 25 9.8
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 25 9.8
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 126 bits (304), Expect = 3e-30
Identities = 67/128 (52%), Positives = 80/128 (62%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LVLAPTRELA QIQQ FG +S +RNTCV+GG P+ Q RDL RGVEI IATPG
Sbjct: 195 GPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPG 254
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK* 614
RL+D L+ TNL+R TYLVLDEAD + K + + + PK+
Sbjct: 255 RLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEV 314
Query: 615 RNLLRDYL 638
+ L RDYL
Sbjct: 315 QRLARDYL 322
Score = 79.0 bits (186), Expect = 6e-16
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RMLDMGFEPQIRKI++QIRPDRQT+M+SATWPKEV++LA L +
Sbjct: 280 RMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLND 324
Score = 73.3 bits (172), Expect = 3e-14
Identities = 29/57 (50%), Positives = 43/57 (75%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
+ V G+ V P+ FEEA FP+YV + VK +G++ PTPIQ Q WP+AMSG+++VG++
Sbjct: 110 IVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGIS 166
Score = 44.4 bits (100), Expect = 1e-05
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
S TGSGKTL+Y LPAIVHIN QP + G+
Sbjct: 166 SATGSGKTLSYCLPAIVHINAQPLLSPGD 194
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 99.1 bits (236), Expect = 5e-22
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Frame = +3
Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
L + H ++P E GPIA+++ PTRELA QI + F +R C +GGAP
Sbjct: 474 LPMFRHIKDQRPLKTGE--GPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPI 531
Query: 378 REQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEAD 509
++Q DL+RG EIV+ TPGR+ID L TNL RCTYLVLDEAD
Sbjct: 532 KDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEAD 578
Score = 58.0 bits (134), Expect = 1e-09
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM D+GFEPQ+ +II IRPDRQT+++SAT+P+ ++ LA +L
Sbjct: 579 RMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVL 621
Score = 44.0 bits (99), Expect = 2e-05
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+ + G++ P+ + + + ++GY++PT IQAQ P SG++++GVAK
Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAK 463
Score = 39.5 bits (88), Expect = 4e-04
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT+A++LP HI +Q P++ GE
Sbjct: 462 AKTGSGKTIAFLLPMFRHIKDQRPLKTGE 490
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 85.4 bits (202), Expect = 7e-18
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GP A+VLAPTRELAQQIQ F R V GG EQ+ + +G IV+ATPG
Sbjct: 325 GPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPG 384
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL+D LE+ L +CTY+V+DEAD
Sbjct: 385 RLLDCLERRLFVLSQCTYVVMDEAD 409
Score = 49.2 bits (112), Expect = 5e-07
Identities = 19/58 (32%), Positives = 38/58 (65%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
+++ G ++ NP++ +EEA P + + +K + YKEP+ IQ P+ + K+L+G+A+
Sbjct: 237 ISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAE 294
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGEVRL 264
++TGSGKT A+I+P I+ I+ PP+ + L
Sbjct: 293 AETGSGKTAAFIIPLIIAISKLPPLTESNMHL 324
Score = 30.3 bits (65), Expect = 0.26
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 19/70 (27%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPD-------------------RQTLMWSATWPKEVKKLAEG 631
RMLDMGFE + KI+ + RQT+M+SAT P V LA+
Sbjct: 410 RMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKS 469
Query: 632 LLGETTFRSI 661
L E +I
Sbjct: 470 YLIEPVMLTI 479
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 85.0 bits (201), Expect = 9e-18
Identities = 39/84 (46%), Positives = 57/84 (67%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P L+LAPTREL QI + + F + S+VR V+GGA R Q R +++G +++ ATPGR
Sbjct: 256 PTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGR 315
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D +++G +L +LVLDEAD
Sbjct: 316 LVDLIDRGRISLANIKFLVLDEAD 339
Score = 54.4 bits (125), Expect = 1e-08
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIR----PDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGFEPQIR I+E +RQTLM+SAT+P++++ LA L + F S+
Sbjct: 340 RMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSV 394
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V VSG ++ P+ F ++ Q +K GY +PTP+Q PI SG++L+ A+
Sbjct: 158 VEVSGGDIE-PVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQ 214
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 70.5 bits (165), Expect = 2e-13
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P LV++PTRELA Q + + ++ V+GGAPK EQAR + ++I TPGR
Sbjct: 237 PRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQAR-AAKNASVIIGTPGR 295
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L+D + G+ + + YLVLDEAD
Sbjct: 296 LLDLINDGSIDCSQVGYLVLDEAD 319
Score = 48.8 bits (111), Expect = 7e-07
Identities = 21/48 (43%), Positives = 34/48 (70%)
Frame = +2
Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
PI F+E + +++G+K YKEPTPIQA WP ++G+++VG+A+
Sbjct: 165 PILQFDELDVSAKLREGLKN--YKEPTPIQAATWPYLLAGRDVVGIAE 210
Score = 42.3 bits (95), Expect = 6e-05
Identities = 25/49 (51%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPD------RQTLMWSATWPKEVKKLAEGLL 637
RMLD GFE IR II PD RQT+ +SATWP+ V+ LA L
Sbjct: 320 RMLDTGFEQDIRNIISHT-PDPTRNGSRQTVFFSATWPESVRALAATFL 367
Score = 28.7 bits (61), Expect = 0.80
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHIN 228
++TGSGKT+A+ +PA+ ++N
Sbjct: 209 AETGSGKTVAFGIPALQYLN 228
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 67.3 bits (157), Expect = 2e-12
Identities = 35/82 (42%), Positives = 45/82 (54%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL+LAPTRELAQQIQ+V G V GG R+ L+ GV +V+ TPGR+
Sbjct: 90 ALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVH 149
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D +++ VLDEAD
Sbjct: 150 DMIQRRALPTDAVQMFVLDEAD 171
Score = 31.1 bits (67), Expect = 0.15
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEV 613
ML GF+ QI I + + P Q ++ SAT P++V
Sbjct: 173 MLSRGFKDQIYDIFQLLPPTAQVVLLSATMPQDV 206
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 66.1 bits (154), Expect = 4e-12
Identities = 34/81 (41%), Positives = 42/81 (51%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 446
L+L PTRELA Q QV G V+ GG R+ L V IV+ TPGR++D
Sbjct: 116 LILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLD 175
Query: 447 FLEKGTTNLQRCTYLVLDEAD 509
KG + CT V+DEAD
Sbjct: 176 LAGKGVADFSECTTFVMDEAD 196
Score = 35.9 bits (79), Expect = 0.005
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAK 190
FE+ + G+ G++ P+PIQ + PIA+SG++++ AK K
Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGK 94
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
++L F P I +++ +RQ ++SAT+P VK +
Sbjct: 197 KLLSPEFTPIIEQLLSYFPKNRQISLYSATFPLIVKNFMD 236
Score = 25.4 bits (53), Expect = 7.4
Identities = 7/23 (30%), Positives = 18/23 (78%)
Frame = +1
Query: 166 RSQTGSGKTLAYILPAIVHINNQ 234
R++ G+GKT A+++P++ ++ +
Sbjct: 87 RAKNGTGKTAAFVIPSLEKVDTK 109
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 65.3 bits (152), Expect = 7e-12
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
G AL+L PTRELA QI + A G +++ + GG Q+ DL + +V+ATPG
Sbjct: 75 GIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSIDLSKRPHVVVATPG 134
Query: 435 RLIDFL----EKGTTNLQRCTYLVLDEAD 509
RL D + E+ L+R +LV+DEAD
Sbjct: 135 RLADLIRSNGEETIAGLRRIKFLVMDEAD 163
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQP 237
++TGSGKT A+ LP I + P
Sbjct: 51 AKTGSGKTAAFALPIIEKWSKDP 73
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 63.3 bits (147), Expect = 3e-11
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
A+VLAPTRELA QI + G + VR+ + GG QA L + +++ TPGRL+
Sbjct: 117 AVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLM 176
Query: 444 DFLE--KGTTNLQRCTYLVLDEAD 509
D LE KG +L+ YL++DEAD
Sbjct: 177 DHLENTKG-FSLKNLKYLIMDEAD 199
Score = 39.1 bits (87), Expect = 6e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
R+LDM F P I KI++ I +R+TL++SAT +V+KL L
Sbjct: 200 RLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRASL 242
Score = 36.7 bits (81), Expect = 0.003
Identities = 13/44 (29%), Positives = 29/44 (65%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F+E D + + + +G+K PTPIQ + P+ ++ ++++G+A+
Sbjct: 48 FKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQ 91
Score = 30.7 bits (66), Expect = 0.20
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQP 237
+QTGSGKT A+ LP I + N P
Sbjct: 90 AQTGSGKTAAFALPVIQELWNNP 112
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 61.3 bits (142), Expect = 1e-10
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +3
Query: 240 YSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 419
+ R G ++++PTRELA QI VA + + V GGA +R +A L +GV ++
Sbjct: 156 FKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAEADKLVKGVNLL 215
Query: 420 IATPGRLIDFLE--KGTTNLQRCTYLVLDEAD 509
+ATPGRL+D L+ KG + LV+DEAD
Sbjct: 216 VATPGRLLDHLQNTKGFV-FRNLRSLVIDEAD 246
Score = 34.3 bits (75), Expect = 0.016
Identities = 17/40 (42%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPD-RQTLMWSATWPKEVKKLA 625
R+L++GFE ++R+I++ + + RQTL++SAT +V+ LA
Sbjct: 247 RILEIGFEDEMRQIMKILPSENRQTLLFSATQTTKVEDLA 286
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAI 216
++TGSGKTLA+++P I
Sbjct: 133 AKTGSGKTLAFLIPTI 148
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 61.3 bits (142), Expect = 1e-10
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGH---TSYVRNTCVFGGAPKREQARDLERGVEIVIA 425
G A+++APTREL QQI VA + + ++ + V GG K+ + + +GV I+I
Sbjct: 216 GIYAVIMAPTRELCQQIYNVANKLNNNPLSHWIVSCNVIGGEKKKSEKARIRKGVNILIG 275
Query: 426 TPGRLIDFLEK-GTTNLQRCTYLVLDEAD 509
TPGRL D LE ++ + ++VLDE D
Sbjct: 276 TPGRLADHLENTEALDVSQVRWVVLDEGD 304
Score = 31.9 bits (69), Expect = 0.085
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQP 237
+QTGSGKTLAY+LP + + P
Sbjct: 185 AQTGSGKTLAYLLPIVQRLIRLP 207
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 13/63 (20%)
Frame = +2
Query: 503 G*RMLDMGFEPQIRKIIEQIR------------PDRQ-TLMWSATWPKEVKKLAEGLLGE 643
G R++DMGFE + KI+ + P R+ T++ SAT VK+L++ L +
Sbjct: 303 GDRLMDMGFEETLTKILSYLESQSSIIKKDLSIPSRKVTMLCSATMKDTVKRLSDSALKD 362
Query: 644 TTF 652
+
Sbjct: 363 ALY 365
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 59.7 bits (138), Expect = 4e-10
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = +3
Query: 195 GLHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 374
G+ + HC Y + ALV+APTRELA QI Q + +R + GG
Sbjct: 177 GIPILEHCLRNVDAKYVQ-----ALVVAPTRELAHQICQHFELIKPSPNIRVMSITGGLA 231
Query: 375 KREQARDLERGVEIVIATPGRLIDFLEKG--TTNLQRCTYLVLDEAD 509
++Q R L + +V+ATPGRL + + T N ++ LVLDEAD
Sbjct: 232 VQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEAD 278
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 166 RSQTGSGKTLAYILPAIVH 222
++ TGSGKTLA+ +P + H
Sbjct: 165 KADTGSGKTLAFGIPILEH 183
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 59.7 bits (138), Expect = 4e-10
Identities = 32/82 (39%), Positives = 44/82 (53%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL+L+P RELA Q +V DF + +R+ + GG EQ L +IV+ATPGR +
Sbjct: 142 ALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVATPGRFL 201
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
+ L Y+V DEAD
Sbjct: 202 HLKVEMKLELSSIEYVVFDEAD 223
Score = 35.9 bits (79), Expect = 0.005
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
R+ +MGF Q+ +I+ + RQTL++SAT P+ + A+
Sbjct: 224 RLFEMGFAAQLTEILHALPTSRQTLLFSATLPRTLVDFAK 263
Score = 33.9 bits (74), Expect = 0.021
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
F+ + + + G+K PTPIQ + P+ + G+++VG+A+
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMAR 114
Score = 29.5 bits (63), Expect = 0.46
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINN 231
++TGSGKT A+++P I H+ +
Sbjct: 113 ARTGSGKTAAFVIPMIEHLKS 133
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 59.3 bits (137), Expect = 5e-10
Identities = 31/82 (37%), Positives = 42/82 (51%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL+L+PTRELA QIQ V G V+ GG + L+ G +V TPGR+
Sbjct: 92 ALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVT 151
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + + + L+LDEAD
Sbjct: 152 DMIRRRNLRTRNVKMLILDEAD 173
Score = 30.7 bits (66), Expect = 0.20
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +2
Query: 29 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
N + FEE N + + +G+ GY+ P+ +Q++ G++++ A+
Sbjct: 18 NAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQ 66
Score = 29.1 bits (62), Expect = 0.60
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 622
+L+ GF+ QI I + P Q ++ SAT P++V ++
Sbjct: 175 LLNQGFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEM 211
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 54.8 bits (126), Expect = 1e-08
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 446
L+L PTRELA Q VA + + GG + Q ++L + +IVIATPGR ID
Sbjct: 334 LILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFID 393
Query: 447 FLEKGT-TNLQRCTYLVLDEAD 509
+ ++ +V+DEAD
Sbjct: 394 HMRNSQGFTVENIEIMVMDEAD 415
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
F+ N + +G+ +G++ PT IQ + P+A+ GK++VG A
Sbjct: 261 FQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAA 303
Score = 32.3 bits (70), Expect = 0.065
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 622
RML+ GF ++ +II+ RQT+++SAT +V L
Sbjct: 416 RMLEDGFADELNEIIQACPKSRQTMLFSATMTDKVDDL 453
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 151 KEFSWRSQTGSGKTLAYILPAIVHINNQP 237
K+ + TGSGKT A+I+P + + +P
Sbjct: 297 KDIVGAAVTGSGKTAAFIVPILERLLYRP 325
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 49.6 bits (113), Expect = 4e-07
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +3
Query: 225 KQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDL 398
KQ + G AL+L PTRELAQQ+ V + ++R V + Q L
Sbjct: 78 KQKQIDENQRGIFALLLVPTRELAQQVYNVLEKLTAFCSKHIRFINVATNSSDTVQRPLL 137
Query: 399 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSK 560
+IVIATP R + + G L + +LV+DEAD+ + N + K+LS+
Sbjct: 138 LDLPDIVIATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYN-EDMKTLSR 190
Score = 35.1 bits (77), Expect = 0.009
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = +2
Query: 14 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
G+ + + F + N +Q+ + +++PT +Q++ P+A+ GK+LV A+
Sbjct: 6 GIREESSEKTFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQAR 59
Score = 33.1 bits (72), Expect = 0.037
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +1
Query: 151 KEFSWRSQTGSGKTLAYILPAIVHINNQPPI---RRGEVRLLW--SWRLPES*HNKFSKL 315
K+ +++TGSGKT AY++P + + Q I +RG LL + L + +N KL
Sbjct: 52 KDLVAQARTGSGKTAAYLIPILELLLKQKQIDENQRGIFALLLVPTRELAQQVYNVLEKL 111
Query: 316 LQILDTHLMFV 348
H+ F+
Sbjct: 112 TAFCSKHIRFI 122
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 49.6 bits (113), Expect = 4e-07
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRL 440
+++L+PTRELA QI + A + + +R + GG K + + RG ++IATPGRL
Sbjct: 115 SVILSPTRELALQIFEEARKLTYGTGIRVSYAIGGNSKMREENAIRRGNANLLIATPGRL 174
Query: 441 IDFLEKGTTNLQRCT-YLVLDEAD 509
D L+ T +LDEAD
Sbjct: 175 EDHLQNPRILESLSTDSFILDEAD 198
Score = 34.3 bits (75), Expect = 0.016
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDR-QTLMWSATWPKEVKKLAEGLLGETTFRSI 661
R++DMGF I I E + + + L +SAT P +V + G+LG T F+ I
Sbjct: 199 RLMDMGFAESILNIHEAVTTTKTRKLCFSATMPPKVSNVFRGILG-TDFKLI 249
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 49.2 bits (112), Expect = 5e-07
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P A+ LAP+RELA+QI V + G Y FG K + + +IVI TPG
Sbjct: 185 PQAICLAPSRELARQIMDVVTEMG--KYTEVKTAFG--IKDSVPKGAKIDAQIVIGTPGT 240
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
++D +++ + + VLDEAD
Sbjct: 241 VMDLMKRRQLDARDIKVFVLDEAD 264
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 48.0 bits (109), Expect = 1e-06
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALV++PTRELA Q + G + GG +E+ L R + I++ TPGRL+
Sbjct: 114 ALVISPTRELAIQTFETLVKIGRLHSFSAGLIIGGNNYKEEKERLSR-MNILVCTPGRLL 172
Query: 444 DFLEKGTT-NLQRCTYLVLDEAD 509
+++ + L+LDEAD
Sbjct: 173 QHIDQAVNFDTSGLQMLILDEAD 195
Score = 39.9 bits (89), Expect = 3e-04
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
R+LDMGF + I+ + RQT+++SAT K VK LA L F S+
Sbjct: 196 RILDMGFRTTLDAIVSSLPVHRQTMLFSATQTKSVKDLARLSLQNPDFISV 246
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHI 225
++TGSGKTLA+I+P I ++
Sbjct: 83 AKTGSGKTLAFIVPLIENL 101
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 44.8 bits (101), Expect = 1e-05
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKR---EQARDLERGVEIVIATPG 434
LVL TRELA QI+ A F + VR +GG + E +D + IV+ATPG
Sbjct: 123 LVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSKSPHIVVATPG 182
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RL + + + + VLDE D
Sbjct: 183 RLNALVREKILKVNSVKHFVLDECD 207
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 41.9 bits (94), Expect = 8e-05
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRL 440
A+++APTREL +QI + A + ++ + K +E+A L ++ I TP RL
Sbjct: 118 AIIVAPTRELCEQIYRQAEKLSFGTSLKIIELSKSNEKIQEKAPKLREKYDMCIGTPMRL 177
Query: 441 IDFLEKGTTNLQRCTYLVLDEAD 509
+ ++ G + ++ + V+DEAD
Sbjct: 178 VQAIQTG-LSFEKVEFFVMDEAD 199
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 175 TGSGKTLAYILPAIVHINNQPP 240
TGSGKT+AY+ P + + P
Sbjct: 92 TGSGKTIAYLFPILQKLQLHVP 113
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-----ERGVEIVIATP 431
+V+ PTREL Q+ + + + ++ G R + L E ++++++TP
Sbjct: 209 VVIVPTRELTVQVAKTFEYYMSGAGLQVCAWTGQKSLRHETYQLNGDENECRIDVLVSTP 268
Query: 432 GRLIDFLEKGTT-NLQRCTYLVLDEAD 509
GRL+D + + +LQ Y+V+DEAD
Sbjct: 269 GRLVDHIRNDESFSLQHLRYMVIDEAD 295
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1
Query: 175 TGSGKTLAYILPAI 216
TGSGKTL+Y++P +
Sbjct: 182 TGSGKTLSYVIPIV 195
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 39.5 bits (88), Expect = 4e-04
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Frame = +3
Query: 216 CAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADF---------GHTSYVRNTCVFG- 365
C K ++ G AL++APTRELA QI V + G V + + G
Sbjct: 59 CFDKVTRRDTDETGLGALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGK 118
Query: 366 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
G + A E+ +VI TPGRL + L + + L+LDEAD
Sbjct: 119 GTLTNDLASFREKNPSVVIGTPGRLNEMLSH--ISSKHLEILILDEAD 164
Score = 34.3 bits (75), Expect = 0.016
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 163
F+ N +++ V G+K+ TP+QA P+ + K+LV
Sbjct: 3 FQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLV 42
Score = 29.9 bits (64), Expect = 0.34
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSAT 598
++DMGF+ ++ II Q+ R+T ++SAT
Sbjct: 166 LIDMGFQRTLQSIISQLPKQRRTGLFSAT 194
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 151 KEFSWRSQTGSGKTLAYILP 210
K+ + TGSGKTLAY+LP
Sbjct: 39 KDLVVEAVTGSGKTLAYLLP 58
>SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 767
Score = 30.3 bits (65), Expect = 0.26
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
G + L TR +++ Q DF G P R L++G+E VI TP
Sbjct: 93 GRVERRLVCTRSISRHSNQKLLDFCVECKKHKIKCVGNFPC---GRCLKKGLECVIETPP 149
Query: 435 RLIDFLEKGTTNLQRCTYL 491
RL+ ++ + NLQR +++
Sbjct: 150 RLLMNKDEISLNLQRLSHM 168
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 29.9 bits (64), Expect = 0.34
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 154 EFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGEVRLLWSWRLPE 288
E ++ GSG+TLA + P ++ +N + + LW+W L E
Sbjct: 834 ELAFGCVLGSGRTLANLAPMMLITHNASHVPPRPSKSLWNWLLGE 878
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 29.1 bits (62), Expect = 0.60
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 216 CAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 395
C K+ + Y + PI ++ +P E+ ++V D Y+ TC+ P+ E + D
Sbjct: 82 CTLKKGSVYQQ---PIDIIFSPGEEVF--FERVGGDI--PVYLSGTCIITNIPEEEDSSD 134
Query: 396 LE 401
LE
Sbjct: 135 LE 136
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.9 bits (59), Expect = 1.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 175 TGSGKTLAYILPAIVHINNQPP 240
TG GK+L++++PA++ Q P
Sbjct: 1215 TGGGKSLSFLIPALIEKKRQTP 1236
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.9 bits (59), Expect = 1.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 175 TGSGKTLAYILPAIVHINNQPP 240
TG GK+L++++PA++ Q P
Sbjct: 1215 TGGGKSLSFLIPALIEKKRQTP 1236
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 630 PSASFFTSLGQVADHIKVCLSGRICSMIF 544
P + S GQ+ D + + L+GR+ IF
Sbjct: 597 PKDQYLMSRGQILDQMGMALAGRVSEEIF 625
>SPAC1805.06c |hem2||porphobilinogen synthase Hem2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 25.8 bits (54), Expect = 5.6
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +3
Query: 315 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR-LIDFL---EKGTTNLQRC 482
A FG S + C G KR RD+ G + ++ PG +D L K +L
Sbjct: 215 APKFGDRSCYQLPCNARGLAKRAILRDVREGADGIMVKPGTPYLDILAMASKLADDLPIA 274
Query: 483 TYLVLDE 503
TY V E
Sbjct: 275 TYQVSGE 281
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 554 EQIRPDRQTLMWSATWPKEVKKLAEGLLGETT 649
+Q+ D +TL WP +VKK+ +G TT
Sbjct: 226 DQLLDDLETL---PKWPDKVKKMQRNWIGRTT 254
>SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 25.4 bits (53), Expect = 7.4
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +1
Query: 133 ADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGEVRLLWSWRLPES*HNKFSK 312
A+ VWK+ +TG T I+ + ++ I+ +R S H K SK
Sbjct: 182 AEESVWKDIGLDQETGLSVTAIPIITETLDHAHEQEIKDQSLRFESSLNEANELHGKLSK 241
Query: 313 LLQ 321
+ Q
Sbjct: 242 IQQ 244
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
Frame = -2
Query: 95 PLSLHLVAHNQENL--LLQSIE 36
PL LH+V+HN+++L LQ IE
Sbjct: 217 PLYLHIVSHNRKDLTVALQEIE 238
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 25.0 bits (52), Expect = 9.8
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V V VE PI Y GV +GY + P G P+ ++GK + V K
Sbjct: 253 VCVKHVEKDQPIGYGGAYVTTRDSLIGVVAIGYGDGFPQVRNGCPVIINGKRVPTVGK 310
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 25.0 bits (52), Expect = 9.8
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -3
Query: 535 WFKSHIQHTSASSRTKYVHRCKLVVPFS-KKSINLPGVAMTISTPLSKSRACS 380
+ K + S S + Y R +V P+S +K T+S+P+SKS + S
Sbjct: 171 YMKKRLPPVSDSDESNYCQRI-IVKPYSSQKDYTQSTHEQTLSSPISKSASVS 222
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 175 TGSGKTLAYILPAIV 219
TG GK+L Y LPA++
Sbjct: 543 TGGGKSLCYQLPAVI 557
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,009,949
Number of Sequences: 5004
Number of extensions: 65600
Number of successful extensions: 281
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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