BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0817 (666 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 126 3e-30 SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 99 5e-22 SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 85 7e-18 SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 85 9e-18 SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 71 2e-13 SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 67 2e-12 SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 66 4e-12 SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 65 7e-12 SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 63 3e-11 SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 61 1e-10 SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 61 1e-10 SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 60 4e-10 SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 60 4e-10 SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 59 5e-10 SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 55 1e-08 SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 50 4e-07 SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 50 4e-07 SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 49 5e-07 SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 48 1e-06 SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 45 1e-05 SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 42 8e-05 SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 42 1e-04 SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 40 4e-04 SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|c... 30 0.26 SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 30 0.34 SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 29 0.60 SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 28 1.4 SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 28 1.4 SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 26 5.6 SPAC1805.06c |hem2||porphobilinogen synthase Hem2 |Schizosacchar... 26 5.6 SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 25 7.4 SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 7.4 SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 25 7.4 SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 25 9.8 SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 25 9.8 SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 25 9.8 >SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosaccharomyces pombe|chr 2|||Manual Length = 550 Score = 126 bits (304), Expect = 3e-30 Identities = 67/128 (52%), Positives = 80/128 (62%) Frame = +3 Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434 GPI LVLAPTRELA QIQQ FG +S +RNTCV+GG P+ Q RDL RGVEI IATPG Sbjct: 195 GPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPG 254 Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL*CGQLLGPKK* 614 RL+D L+ TNL+R TYLVLDEAD + K + + + PK+ Sbjct: 255 RLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEV 314 Query: 615 RNLLRDYL 638 + L RDYL Sbjct: 315 QRLARDYL 322 Score = 79.0 bits (186), Expect = 6e-16 Identities = 34/45 (75%), Positives = 41/45 (91%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643 RMLDMGFEPQIRKI++QIRPDRQT+M+SATWPKEV++LA L + Sbjct: 280 RMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLND 324 Score = 73.3 bits (172), Expect = 3e-14 Identities = 29/57 (50%), Positives = 43/57 (75%) Frame = +2 Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172 + V G+ V P+ FEEA FP+YV + VK +G++ PTPIQ Q WP+AMSG+++VG++ Sbjct: 110 IVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGIS 166 Score = 44.4 bits (100), Expect = 1e-05 Identities = 20/29 (68%), Positives = 23/29 (79%) Frame = +1 Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255 S TGSGKTL+Y LPAIVHIN QP + G+ Sbjct: 166 SATGSGKTLSYCLPAIVHINAQPLLSPGD 194 >SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosaccharomyces pombe|chr 3|||Manual Length = 1014 Score = 99.1 bits (236), Expect = 5e-22 Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 3/107 (2%) Frame = +3 Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377 L + H ++P E GPIA+++ PTRELA QI + F +R C +GGAP Sbjct: 474 LPMFRHIKDQRPLKTGE--GPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPI 531 Query: 378 REQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEAD 509 ++Q DL+RG EIV+ TPGR+ID L TNL RCTYLVLDEAD Sbjct: 532 KDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEAD 578 Score = 58.0 bits (134), Expect = 1e-09 Identities = 24/43 (55%), Positives = 35/43 (81%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637 RM D+GFEPQ+ +II IRPDRQT+++SAT+P+ ++ LA +L Sbjct: 579 RMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVL 621 Score = 44.0 bits (99), Expect = 2e-05 Identities = 17/58 (29%), Positives = 33/58 (56%) Frame = +2 Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175 + + G++ P+ + + + ++GY++PT IQAQ P SG++++GVAK Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAK 463 Score = 39.5 bits (88), Expect = 4e-04 Identities = 15/29 (51%), Positives = 23/29 (79%) Frame = +1 Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255 ++TGSGKT+A++LP HI +Q P++ GE Sbjct: 462 AKTGSGKTIAFLLPMFRHIKDQRPLKTGE 490 >SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 85.4 bits (202), Expect = 7e-18 Identities = 44/85 (51%), Positives = 54/85 (63%) Frame = +3 Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434 GP A+VLAPTRELAQQIQ F R V GG EQ+ + +G IV+ATPG Sbjct: 325 GPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPG 384 Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509 RL+D LE+ L +CTY+V+DEAD Sbjct: 385 RLLDCLERRLFVLSQCTYVVMDEAD 409 Score = 49.2 bits (112), Expect = 5e-07 Identities = 19/58 (32%), Positives = 38/58 (65%) Frame = +2 Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175 +++ G ++ NP++ +EEA P + + +K + YKEP+ IQ P+ + K+L+G+A+ Sbjct: 237 ISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAE 294 Score = 36.3 bits (80), Expect = 0.004 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = +1 Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGEVRL 264 ++TGSGKT A+I+P I+ I+ PP+ + L Sbjct: 293 AETGSGKTAAFIIPLIIAISKLPPLTESNMHL 324 Score = 30.3 bits (65), Expect = 0.26 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 19/70 (27%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIRPD-------------------RQTLMWSATWPKEVKKLAEG 631 RMLDMGFE + KI+ + RQT+M+SAT P V LA+ Sbjct: 410 RMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKS 469 Query: 632 LLGETTFRSI 661 L E +I Sbjct: 470 YLIEPVMLTI 479 >SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Sum3|Schizosaccharomyces pombe|chr 3|||Manual Length = 636 Score = 85.0 bits (201), Expect = 9e-18 Identities = 39/84 (46%), Positives = 57/84 (67%) Frame = +3 Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437 P L+LAPTREL QI + + F + S+VR V+GGA R Q R +++G +++ ATPGR Sbjct: 256 PTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGR 315 Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509 L+D +++G +L +LVLDEAD Sbjct: 316 LVDLIDRGRISLANIKFLVLDEAD 339 Score = 54.4 bits (125), Expect = 1e-08 Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 4/55 (7%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIR----PDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661 RMLDMGFEPQIR I+E +RQTLM+SAT+P++++ LA L + F S+ Sbjct: 340 RMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSV 394 Score = 43.2 bits (97), Expect = 3e-05 Identities = 20/58 (34%), Positives = 32/58 (55%) Frame = +2 Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175 V VSG ++ P+ F ++ Q +K GY +PTP+Q PI SG++L+ A+ Sbjct: 158 VEVSGGDIE-PVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQ 214 >SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 578 Score = 70.5 bits (165), Expect = 2e-13 Identities = 36/84 (42%), Positives = 51/84 (60%) Frame = +3 Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437 P LV++PTRELA Q + + ++ V+GGAPK EQAR + ++I TPGR Sbjct: 237 PRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQAR-AAKNASVIIGTPGR 295 Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509 L+D + G+ + + YLVLDEAD Sbjct: 296 LLDLINDGSIDCSQVGYLVLDEAD 319 Score = 48.8 bits (111), Expect = 7e-07 Identities = 21/48 (43%), Positives = 34/48 (70%) Frame = +2 Query: 32 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175 PI F+E + +++G+K YKEPTPIQA WP ++G+++VG+A+ Sbjct: 165 PILQFDELDVSAKLREGLKN--YKEPTPIQAATWPYLLAGRDVVGIAE 210 Score = 42.3 bits (95), Expect = 6e-05 Identities = 25/49 (51%), Positives = 29/49 (59%), Gaps = 6/49 (12%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIRPD------RQTLMWSATWPKEVKKLAEGLL 637 RMLD GFE IR II PD RQT+ +SATWP+ V+ LA L Sbjct: 320 RMLDTGFEQDIRNIISHT-PDPTRNGSRQTVFFSATWPESVRALAATFL 367 Score = 28.7 bits (61), Expect = 0.80 Identities = 10/20 (50%), Positives = 18/20 (90%) Frame = +1 Query: 169 SQTGSGKTLAYILPAIVHIN 228 ++TGSGKT+A+ +PA+ ++N Sbjct: 209 AETGSGKTVAFGIPALQYLN 228 >SPAC1006.07 |||translation initiation factor eIF4A|Schizosaccharomyces pombe|chr 1|||Manual Length = 392 Score = 67.3 bits (157), Expect = 2e-12 Identities = 35/82 (42%), Positives = 45/82 (54%) Frame = +3 Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443 AL+LAPTRELAQQIQ+V G V GG R+ L+ GV +V+ TPGR+ Sbjct: 90 ALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVH 149 Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509 D +++ VLDEAD Sbjct: 150 DMIQRRALPTDAVQMFVLDEAD 171 Score = 31.1 bits (67), Expect = 0.15 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +2 Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEV 613 ML GF+ QI I + + P Q ++ SAT P++V Sbjct: 173 MLSRGFKDQIYDIFQLLPPTAQVVLLSATMPQDV 206 >SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccharomyces pombe|chr 2|||Manual Length = 485 Score = 66.1 bits (154), Expect = 4e-12 Identities = 34/81 (41%), Positives = 42/81 (51%) Frame = +3 Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 446 L+L PTRELA Q QV G V+ GG R+ L V IV+ TPGR++D Sbjct: 116 LILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLD 175 Query: 447 FLEKGTTNLQRCTYLVLDEAD 509 KG + CT V+DEAD Sbjct: 176 LAGKGVADFSECTTFVMDEAD 196 Score = 35.9 bits (79), Expect = 0.005 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +2 Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAK 190 FE+ + G+ G++ P+PIQ + PIA+SG++++ AK K Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGK 94 Score = 26.6 bits (56), Expect = 3.2 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628 ++L F P I +++ +RQ ++SAT+P VK + Sbjct: 197 KLLSPEFTPIIEQLLSYFPKNRQISLYSATFPLIVKNFMD 236 Score = 25.4 bits (53), Expect = 7.4 Identities = 7/23 (30%), Positives = 18/23 (78%) Frame = +1 Query: 166 RSQTGSGKTLAYILPAIVHINNQ 234 R++ G+GKT A+++P++ ++ + Sbjct: 87 RAKNGTGKTAAFVIPSLEKVDTK 109 >SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccharomyces pombe|chr 2|||Manual Length = 453 Score = 65.3 bits (152), Expect = 7e-12 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 4/89 (4%) Frame = +3 Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434 G AL+L PTRELA QI + A G +++ + GG Q+ DL + +V+ATPG Sbjct: 75 GIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSIDLSKRPHVVVATPG 134 Query: 435 RLIDFL----EKGTTNLQRCTYLVLDEAD 509 RL D + E+ L+R +LV+DEAD Sbjct: 135 RLADLIRSNGEETIAGLRRIKFLVMDEAD 163 Score = 25.8 bits (54), Expect = 5.6 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +1 Query: 169 SQTGSGKTLAYILPAIVHINNQP 237 ++TGSGKT A+ LP I + P Sbjct: 51 AKTGSGKTAAFALPIIEKWSKDP 73 >SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 465 Score = 63.3 bits (147), Expect = 3e-11 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 2/84 (2%) Frame = +3 Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443 A+VLAPTRELA QI + G + VR+ + GG QA L + +++ TPGRL+ Sbjct: 117 AVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLM 176 Query: 444 DFLE--KGTTNLQRCTYLVLDEAD 509 D LE KG +L+ YL++DEAD Sbjct: 177 DHLENTKG-FSLKNLKYLIMDEAD 199 Score = 39.1 bits (87), Expect = 6e-04 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637 R+LDM F P I KI++ I +R+TL++SAT +V+KL L Sbjct: 200 RLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRASL 242 Score = 36.7 bits (81), Expect = 0.003 Identities = 13/44 (29%), Positives = 29/44 (65%) Frame = +2 Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175 F+E D + + + +G+K PTPIQ + P+ ++ ++++G+A+ Sbjct: 48 FKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQ 91 Score = 30.7 bits (66), Expect = 0.20 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +1 Query: 169 SQTGSGKTLAYILPAIVHINNQP 237 +QTGSGKT A+ LP I + N P Sbjct: 90 AQTGSGKTAAFALPVIQELWNNP 112 >SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 578 Score = 61.3 bits (142), Expect = 1e-10 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 2/92 (2%) Frame = +3 Query: 240 YSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 419 + R G ++++PTRELA QI VA + + V GGA +R +A L +GV ++ Sbjct: 156 FKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAEADKLVKGVNLL 215 Query: 420 IATPGRLIDFLE--KGTTNLQRCTYLVLDEAD 509 +ATPGRL+D L+ KG + LV+DEAD Sbjct: 216 VATPGRLLDHLQNTKGFV-FRNLRSLVIDEAD 246 Score = 34.3 bits (75), Expect = 0.016 Identities = 17/40 (42%), Positives = 31/40 (77%), Gaps = 1/40 (2%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIRPD-RQTLMWSATWPKEVKKLA 625 R+L++GFE ++R+I++ + + RQTL++SAT +V+ LA Sbjct: 247 RILEIGFEDEMRQIMKILPSENRQTLLFSATQTTKVEDLA 286 Score = 27.9 bits (59), Expect = 1.4 Identities = 10/16 (62%), Positives = 15/16 (93%) Frame = +1 Query: 169 SQTGSGKTLAYILPAI 216 ++TGSGKTLA+++P I Sbjct: 133 AKTGSGKTLAFLIPTI 148 >SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces pombe|chr 2|||Manual Length = 709 Score = 61.3 bits (142), Expect = 1e-10 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 4/89 (4%) Frame = +3 Query: 255 GPIALVLAPTRELAQQIQQVAADFGH---TSYVRNTCVFGGAPKREQARDLERGVEIVIA 425 G A+++APTREL QQI VA + + ++ + V GG K+ + + +GV I+I Sbjct: 216 GIYAVIMAPTRELCQQIYNVANKLNNNPLSHWIVSCNVIGGEKKKSEKARIRKGVNILIG 275 Query: 426 TPGRLIDFLEK-GTTNLQRCTYLVLDEAD 509 TPGRL D LE ++ + ++VLDE D Sbjct: 276 TPGRLADHLENTEALDVSQVRWVVLDEGD 304 Score = 31.9 bits (69), Expect = 0.085 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 169 SQTGSGKTLAYILPAIVHINNQP 237 +QTGSGKTLAY+LP + + P Sbjct: 185 AQTGSGKTLAYLLPIVQRLIRLP 207 Score = 27.5 bits (58), Expect = 1.8 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 13/63 (20%) Frame = +2 Query: 503 G*RMLDMGFEPQIRKIIEQIR------------PDRQ-TLMWSATWPKEVKKLAEGLLGE 643 G R++DMGFE + KI+ + P R+ T++ SAT VK+L++ L + Sbjct: 303 GDRLMDMGFEETLTKILSYLESQSSIIKKDLSIPSRKVTMLCSATMKDTVKRLSDSALKD 362 Query: 644 TTF 652 + Sbjct: 363 ALY 365 >SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces pombe|chr 2|||Manual Length = 648 Score = 59.7 bits (138), Expect = 4e-10 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 2/107 (1%) Frame = +3 Query: 195 GLHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 374 G+ + HC Y + ALV+APTRELA QI Q + +R + GG Sbjct: 177 GIPILEHCLRNVDAKYVQ-----ALVVAPTRELAHQICQHFELIKPSPNIRVMSITGGLA 231 Query: 375 KREQARDLERGVEIVIATPGRLIDFLEKG--TTNLQRCTYLVLDEAD 509 ++Q R L + +V+ATPGRL + + T N ++ LVLDEAD Sbjct: 232 VQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEAD 278 Score = 27.1 bits (57), Expect = 2.4 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +1 Query: 166 RSQTGSGKTLAYILPAIVH 222 ++ TGSGKTLA+ +P + H Sbjct: 165 KADTGSGKTLAFGIPILEH 183 >SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosaccharomyces pombe|chr 1|||Manual Length = 848 Score = 59.7 bits (138), Expect = 4e-10 Identities = 32/82 (39%), Positives = 44/82 (53%) Frame = +3 Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443 AL+L+P RELA Q +V DF + +R+ + GG EQ L +IV+ATPGR + Sbjct: 142 ALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVATPGRFL 201 Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509 + L Y+V DEAD Sbjct: 202 HLKVEMKLELSSIEYVVFDEAD 223 Score = 35.9 bits (79), Expect = 0.005 Identities = 15/40 (37%), Positives = 26/40 (65%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628 R+ +MGF Q+ +I+ + RQTL++SAT P+ + A+ Sbjct: 224 RLFEMGFAAQLTEILHALPTSRQTLLFSATLPRTLVDFAK 263 Score = 33.9 bits (74), Expect = 0.021 Identities = 13/44 (29%), Positives = 26/44 (59%) Frame = +2 Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175 F+ + + + G+K PTPIQ + P+ + G+++VG+A+ Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMAR 114 Score = 29.5 bits (63), Expect = 0.46 Identities = 10/21 (47%), Positives = 17/21 (80%) Frame = +1 Query: 169 SQTGSGKTLAYILPAIVHINN 231 ++TGSGKT A+++P I H+ + Sbjct: 113 ARTGSGKTAAFVIPMIEHLKS 133 >SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosaccharomyces pombe|chr 1|||Manual Length = 394 Score = 59.3 bits (137), Expect = 5e-10 Identities = 31/82 (37%), Positives = 42/82 (51%) Frame = +3 Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443 AL+L+PTRELA QIQ V G V+ GG + L+ G +V TPGR+ Sbjct: 92 ALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVT 151 Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509 D + + + L+LDEAD Sbjct: 152 DMIRRRNLRTRNVKMLILDEAD 173 Score = 30.7 bits (66), Expect = 0.20 Identities = 12/49 (24%), Positives = 27/49 (55%) Frame = +2 Query: 29 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175 N + FEE N + + +G+ GY+ P+ +Q++ G++++ A+ Sbjct: 18 NAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQ 66 Score = 29.1 bits (62), Expect = 0.60 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = +2 Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 622 +L+ GF+ QI I + P Q ++ SAT P++V ++ Sbjct: 175 LLNQGFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEM 211 >SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 754 Score = 54.8 bits (126), Expect = 1e-08 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +3 Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 446 L+L PTRELA Q VA + + GG + Q ++L + +IVIATPGR ID Sbjct: 334 LILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFID 393 Query: 447 FLEKGT-TNLQRCTYLVLDEAD 509 + ++ +V+DEAD Sbjct: 394 HMRNSQGFTVENIEIMVMDEAD 415 Score = 36.7 bits (81), Expect = 0.003 Identities = 15/43 (34%), Positives = 27/43 (62%) Frame = +2 Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172 F+ N + +G+ +G++ PT IQ + P+A+ GK++VG A Sbjct: 261 FQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAA 303 Score = 32.3 bits (70), Expect = 0.065 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 622 RML+ GF ++ +II+ RQT+++SAT +V L Sbjct: 416 RMLEDGFADELNEIIQACPKSRQTMLFSATMTDKVDDL 453 Score = 25.8 bits (54), Expect = 5.6 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +1 Query: 151 KEFSWRSQTGSGKTLAYILPAIVHINNQP 237 K+ + TGSGKT A+I+P + + +P Sbjct: 297 KDIVGAAVTGSGKTAAFIVPILERLLYRP 325 >SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharomyces pombe|chr 3|||Manual Length = 595 Score = 49.6 bits (113), Expect = 4e-07 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 2/114 (1%) Frame = +3 Query: 225 KQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDL 398 KQ + G AL+L PTRELAQQ+ V + ++R V + Q L Sbjct: 78 KQKQIDENQRGIFALLLVPTRELAQQVYNVLEKLTAFCSKHIRFINVATNSSDTVQRPLL 137 Query: 399 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSK 560 +IVIATP R + + G L + +LV+DEAD+ + N + K+LS+ Sbjct: 138 LDLPDIVIATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYN-EDMKTLSR 190 Score = 35.1 bits (77), Expect = 0.009 Identities = 14/54 (25%), Positives = 31/54 (57%) Frame = +2 Query: 14 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175 G+ + + F + N +Q+ + +++PT +Q++ P+A+ GK+LV A+ Sbjct: 6 GIREESSEKTFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQAR 59 Score = 33.1 bits (72), Expect = 0.037 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Frame = +1 Query: 151 KEFSWRSQTGSGKTLAYILPAIVHINNQPPI---RRGEVRLLW--SWRLPES*HNKFSKL 315 K+ +++TGSGKT AY++P + + Q I +RG LL + L + +N KL Sbjct: 52 KDLVAQARTGSGKTAAYLIPILELLLKQKQIDENQRGIFALLLVPTRELAQQVYNVLEKL 111 Query: 316 LQILDTHLMFV 348 H+ F+ Sbjct: 112 TAFCSKHIRFI 122 >SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |Schizosaccharomyces pombe|chr 2|||Manual Length = 535 Score = 49.6 bits (113), Expect = 4e-07 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%) Frame = +3 Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRL 440 +++L+PTRELA QI + A + + +R + GG K + + RG ++IATPGRL Sbjct: 115 SVILSPTRELALQIFEEARKLTYGTGIRVSYAIGGNSKMREENAIRRGNANLLIATPGRL 174 Query: 441 IDFLEKGTTNLQRCT-YLVLDEAD 509 D L+ T +LDEAD Sbjct: 175 EDHLQNPRILESLSTDSFILDEAD 198 Score = 34.3 bits (75), Expect = 0.016 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIRPDR-QTLMWSATWPKEVKKLAEGLLGETTFRSI 661 R++DMGF I I E + + + L +SAT P +V + G+LG T F+ I Sbjct: 199 RLMDMGFAESILNIHEAVTTTKTRKLCFSATMPPKVSNVFRGILG-TDFKLI 249 >SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces pombe|chr 2|||Manual Length = 503 Score = 49.2 bits (112), Expect = 5e-07 Identities = 30/84 (35%), Positives = 44/84 (52%) Frame = +3 Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437 P A+ LAP+RELA+QI V + G Y FG K + + +IVI TPG Sbjct: 185 PQAICLAPSRELARQIMDVVTEMG--KYTEVKTAFG--IKDSVPKGAKIDAQIVIGTPGT 240 Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509 ++D +++ + + VLDEAD Sbjct: 241 VMDLMKRRQLDARDIKVFVLDEAD 264 >SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces pombe|chr 1|||Manual Length = 735 Score = 48.0 bits (109), Expect = 1e-06 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Frame = +3 Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443 ALV++PTRELA Q + G + GG +E+ L R + I++ TPGRL+ Sbjct: 114 ALVISPTRELAIQTFETLVKIGRLHSFSAGLIIGGNNYKEEKERLSR-MNILVCTPGRLL 172 Query: 444 DFLEKGTT-NLQRCTYLVLDEAD 509 +++ + L+LDEAD Sbjct: 173 QHIDQAVNFDTSGLQMLILDEAD 195 Score = 39.9 bits (89), Expect = 3e-04 Identities = 21/51 (41%), Positives = 29/51 (56%) Frame = +2 Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661 R+LDMGF + I+ + RQT+++SAT K VK LA L F S+ Sbjct: 196 RILDMGFRTTLDAIVSSLPVHRQTMLFSATQTKSVKDLARLSLQNPDFISV 246 Score = 28.3 bits (60), Expect = 1.1 Identities = 11/19 (57%), Positives = 17/19 (89%) Frame = +1 Query: 169 SQTGSGKTLAYILPAIVHI 225 ++TGSGKTLA+I+P I ++ Sbjct: 83 AKTGSGKTLAFIVPLIENL 101 >SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosaccharomyces pombe|chr 1|||Manual Length = 434 Score = 44.8 bits (101), Expect = 1e-05 Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 4/85 (4%) Frame = +3 Query: 267 LVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKR---EQARDLERGVEIVIATPG 434 LVL TRELA QI+ A F + VR +GG + E +D + IV+ATPG Sbjct: 123 LVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSKSPHIVVATPG 182 Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509 RL + + + + VLDE D Sbjct: 183 RLNALVREKILKVNSVKHFVLDECD 207 >SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 481 Score = 41.9 bits (94), Expect = 8e-05 Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Frame = +3 Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRL 440 A+++APTREL +QI + A + ++ + K +E+A L ++ I TP RL Sbjct: 118 AIIVAPTRELCEQIYRQAEKLSFGTSLKIIELSKSNEKIQEKAPKLREKYDMCIGTPMRL 177 Query: 441 IDFLEKGTTNLQRCTYLVLDEAD 509 + ++ G + ++ + V+DEAD Sbjct: 178 VQAIQTG-LSFEKVEFFVMDEAD 199 Score = 26.2 bits (55), Expect = 4.2 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 Query: 175 TGSGKTLAYILPAIVHINNQPP 240 TGSGKT+AY+ P + + P Sbjct: 92 TGSGKTIAYLFPILQKLQLHVP 113 >SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces pombe|chr 3|||Manual Length = 604 Score = 41.5 bits (93), Expect = 1e-04 Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 6/87 (6%) Frame = +3 Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-----ERGVEIVIATP 431 +V+ PTREL Q+ + + + ++ G R + L E ++++++TP Sbjct: 209 VVIVPTRELTVQVAKTFEYYMSGAGLQVCAWTGQKSLRHETYQLNGDENECRIDVLVSTP 268 Query: 432 GRLIDFLEKGTT-NLQRCTYLVLDEAD 509 GRL+D + + +LQ Y+V+DEAD Sbjct: 269 GRLVDHIRNDESFSLQHLRYMVIDEAD 295 Score = 27.1 bits (57), Expect = 2.4 Identities = 9/14 (64%), Positives = 13/14 (92%) Frame = +1 Query: 175 TGSGKTLAYILPAI 216 TGSGKTL+Y++P + Sbjct: 182 TGSGKTLSYVIPIV 195 >SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces pombe|chr 2|||Manual Length = 606 Score = 39.5 bits (88), Expect = 4e-04 Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 10/108 (9%) Frame = +3 Query: 216 CAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADF---------GHTSYVRNTCVFG- 365 C K ++ G AL++APTRELA QI V + G V + + G Sbjct: 59 CFDKVTRRDTDETGLGALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGK 118 Query: 366 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509 G + A E+ +VI TPGRL + L + + L+LDEAD Sbjct: 119 GTLTNDLASFREKNPSVVIGTPGRLNEMLSH--ISSKHLEILILDEAD 164 Score = 34.3 bits (75), Expect = 0.016 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +2 Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 163 F+ N +++ V G+K+ TP+QA P+ + K+LV Sbjct: 3 FQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLV 42 Score = 29.9 bits (64), Expect = 0.34 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +2 Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSAT 598 ++DMGF+ ++ II Q+ R+T ++SAT Sbjct: 166 LIDMGFQRTLQSIISQLPKQRRTGLFSAT 194 Score = 28.3 bits (60), Expect = 1.1 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +1 Query: 151 KEFSWRSQTGSGKTLAYILP 210 K+ + TGSGKTLAY+LP Sbjct: 39 KDLVVEAVTGSGKTLAYLLP 58 >SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|chr 3|||Manual Length = 767 Score = 30.3 bits (65), Expect = 0.26 Identities = 23/79 (29%), Positives = 37/79 (46%) Frame = +3 Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434 G + L TR +++ Q DF G P R L++G+E VI TP Sbjct: 93 GRVERRLVCTRSISRHSNQKLLDFCVECKKHKIKCVGNFPC---GRCLKKGLECVIETPP 149 Query: 435 RLIDFLEKGTTNLQRCTYL 491 RL+ ++ + NLQR +++ Sbjct: 150 RLLMNKDEISLNLQRLSHM 168 >SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 1004 Score = 29.9 bits (64), Expect = 0.34 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +1 Query: 154 EFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGEVRLLWSWRLPE 288 E ++ GSG+TLA + P ++ +N + + LW+W L E Sbjct: 834 ELAFGCVLGSGRTLANLAPMMLITHNASHVPPRPSKSLWNWLLGE 878 >SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |Schizosaccharomyces pombe|chr 1|||Manual Length = 362 Score = 29.1 bits (62), Expect = 0.60 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +3 Query: 216 CAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 395 C K+ + Y + PI ++ +P E+ ++V D Y+ TC+ P+ E + D Sbjct: 82 CTLKKGSVYQQ---PIDIIFSPGEEVF--FERVGGDI--PVYLSGTCIITNIPEEEDSSD 134 Query: 396 LE 401 LE Sbjct: 135 LE 136 >SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pombe|chr 1||Partial|Manual Length = 1887 Score = 27.9 bits (59), Expect = 1.4 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +1 Query: 175 TGSGKTLAYILPAIVHINNQPP 240 TG GK+L++++PA++ Q P Sbjct: 1215 TGGGKSLSFLIPALIEKKRQTP 1236 >SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1919 Score = 27.9 bits (59), Expect = 1.4 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +1 Query: 175 TGSGKTLAYILPAIVHINNQPP 240 TG GK+L++++PA++ Q P Sbjct: 1215 TGGGKSLSFLIPALIEKKRQTP 1236 >SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces pombe|chr 2|||Manual Length = 773 Score = 25.8 bits (54), Expect = 5.6 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = -1 Query: 630 PSASFFTSLGQVADHIKVCLSGRICSMIF 544 P + S GQ+ D + + L+GR+ IF Sbjct: 597 PKDQYLMSRGQILDQMGMALAGRVSEEIF 625 >SPAC1805.06c |hem2||porphobilinogen synthase Hem2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 329 Score = 25.8 bits (54), Expect = 5.6 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 4/67 (5%) Frame = +3 Query: 315 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR-LIDFL---EKGTTNLQRC 482 A FG S + C G KR RD+ G + ++ PG +D L K +L Sbjct: 215 APKFGDRSCYQLPCNARGLAKRAILRDVREGADGIMVKPGTPYLDILAMASKLADDLPIA 274 Query: 483 TYLVLDE 503 TY V E Sbjct: 275 TYQVSGE 281 >SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces pombe|chr 1|||Manual Length = 874 Score = 25.4 bits (53), Expect = 7.4 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +2 Query: 554 EQIRPDRQTLMWSATWPKEVKKLAEGLLGETT 649 +Q+ D +TL WP +VKK+ +G TT Sbjct: 226 DQLLDDLETL---PKWPDKVKKMQRNWIGRTT 254 >SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 550 Score = 25.4 bits (53), Expect = 7.4 Identities = 16/63 (25%), Positives = 26/63 (41%) Frame = +1 Query: 133 ADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGEVRLLWSWRLPES*HNKFSK 312 A+ VWK+ +TG T I+ + ++ I+ +R S H K SK Sbjct: 182 AEESVWKDIGLDQETGLSVTAIPIITETLDHAHEQEIKDQSLRFESSLNEANELHGKLSK 241 Query: 313 LLQ 321 + Q Sbjct: 242 IQQ 244 >SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 534 Score = 25.4 bits (53), Expect = 7.4 Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 2/22 (9%) Frame = -2 Query: 95 PLSLHLVAHNQENL--LLQSIE 36 PL LH+V+HN+++L LQ IE Sbjct: 217 PLYLHIVSHNRKDLTVALQEIE 238 >SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 370 Score = 25.0 bits (52), Expect = 9.8 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +2 Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175 V V VE PI Y GV +GY + P G P+ ++GK + V K Sbjct: 253 VCVKHVEKDQPIGYGGAYVTTRDSLIGVVAIGYGDGFPQVRNGCPVIINGKRVPTVGK 310 >SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharomyces pombe|chr 2|||Manual Length = 693 Score = 25.0 bits (52), Expect = 9.8 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -3 Query: 535 WFKSHIQHTSASSRTKYVHRCKLVVPFS-KKSINLPGVAMTISTPLSKSRACS 380 + K + S S + Y R +V P+S +K T+S+P+SKS + S Sbjct: 171 YMKKRLPPVSDSDESNYCQRI-IVKPYSSQKDYTQSTHEQTLSSPISKSASVS 222 >SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1328 Score = 25.0 bits (52), Expect = 9.8 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +1 Query: 175 TGSGKTLAYILPAIV 219 TG GK+L Y LPA++ Sbjct: 543 TGGGKSLCYQLPAVI 557 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,009,949 Number of Sequences: 5004 Number of extensions: 65600 Number of successful extensions: 281 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 207 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 264 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 303841898 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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