Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0817
(666 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 126 1e-29
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 9e-21
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 2e-18
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 6e-17
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 72 4e-13
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 65 4e-11
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 64 7e-11
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 64 1e-10
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 57 1e-08
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 57 1e-08
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 54 8e-08
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 51 7e-07
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 51 7e-07
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 48 7e-06
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 48 7e-06
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 47 1e-05
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 47 1e-05
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 46 4e-05
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 46 4e-05
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 45 5e-05
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 45 6e-05
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 44 8e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 44 1e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 42 5e-04
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 38 0.007
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 36 0.039
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 32 0.37
SB_47383| Best HMM Match : LON (HMM E-Value=1.3) 32 0.48
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_39160| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_53319| Best HMM Match : zf-CW (HMM E-Value=7.7e-17) 29 2.6
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.9
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 126 bits (305), Expect = 1e-29
Identities = 60/85 (70%), Positives = 68/85 (80%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK Q R+LERGVEI IATPG
Sbjct: 132 GPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPG 191
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLID LE TNL+RCTYLVLDEAD
Sbjct: 192 RLIDMLESRKTNLRRCTYLVLDEAD 216
Score = 81.0 bits (191), Expect = 8e-16
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
RMLDMGFEPQIR II+QIRPDRQTLMWSATWPKEV+ LA L +
Sbjct: 217 RMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSD 261
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 127
+TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 71 LTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 199 YILPAIVHINNQPPIRRGE 255
+ILP IVHIN+QP ++ G+
Sbjct: 113 FILPGIVHINHQPLLQPGD 131
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 97.5 bits (232), Expect = 9e-21
Identities = 48/85 (56%), Positives = 56/85 (65%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
GPI L+ APTREL QQI A FG + VFGG K EQ++ L+ G EIV+ATPG
Sbjct: 590 GPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPG 649
Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
RLID ++ TNL R TYLV DEAD
Sbjct: 650 RLIDHVKAKATNLHRVTYLVFDEAD 674
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK-- 175
+ VSG P F F + + ++ + Y +PT IQ Q PIA+SG++++G+AK
Sbjct: 505 IKVSGAMPARPCISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTG 564
Query: 176 --RVPAKRWP 199
+ A WP
Sbjct: 565 SGKTAAFLWP 574
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKT A++ PA+VHI +QP ++ G+
Sbjct: 561 AKTGSGKTAAFLWPALVHIMDQPELQVGD 589
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 89.8 bits (213), Expect = 2e-18
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Frame = +3
Query: 261 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 440
IA+V+ PTRELA QI + F + +R CV+GG EQ +L+RG EI++ TPGR+
Sbjct: 146 IAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRM 205
Query: 441 IDFLEKG---TTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDRL 581
ID L TN QRCTYLVLDEAD ++D+ + + + +Y + R+
Sbjct: 206 IDMLTANNGRVTNCQRCTYLVLDEAD--RMFDMGFEPQITKIRYPKVMRI 253
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 8/51 (15%)
Frame = +2
Query: 509 RMLDMGFEPQIRKI--------IEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM DMGFEPQI KI I+ IRPDRQT+M+SAT+P++++ LA +L
Sbjct: 232 RMFDMGFEPQITKIRYPKVMRIIDCIRPDRQTVMFSATFPRQMEALARKIL 282
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 169
+ V G P++ + + + +K Y++PTPIQAQ P+ MSG++++ +
Sbjct: 93 IHVRGKNAPKPVKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAI 148
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/92 (43%), Positives = 57/92 (61%)
Frame = +3
Query: 234 TAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 413
+++SE P A+ +APTRELA QI A F H + +R +GG Q R L+ G
Sbjct: 781 SSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCN 840
Query: 414 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
+++ TPGRL DF+EKG +L+ +L+LDEAD
Sbjct: 841 LLVGTPGRLTDFIEKGKVSLKGLQFLILDEAD 872
Score = 75.4 bits (177), Expect = 4e-14
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 9/229 (3%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK-- 175
V VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ A+
Sbjct: 699 VLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTG 758
Query: 176 --RVPAKRWPTSCQPLCT*TTNRLFGEVRS-DCFGLGAYQRVSTTNSASCCRFWTHILCS 346
+ A P + T+ F E ++ + + ++ +F +
Sbjct: 759 SGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLR 818
Query: 347 *HVCVWWCS*KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*RMLDMG 526
VC S L G + F+ KG L + RMLDMG
Sbjct: 819 PVVCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRMLDMG 878
Query: 527 FEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
FEP IR+I+E + + +RQTLM+SAT+P+E+++LA L + F ++
Sbjct: 879 FEPAIRRIVESMGMPDKSERQTLMFSATFPEEIQRLAGDFLNDYLFLTV 927
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINN 231
+QTGSGKT A++LP + + N
Sbjct: 755 AQTGSGKTAAFLLPVMTSMMN 775
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/82 (48%), Positives = 49/82 (59%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
ALVLAPTRELAQQIQ+V G +V+ GG RE LE GV +V+ TPGR+
Sbjct: 162 ALVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVF 221
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
D + +G N + VLDEAD
Sbjct: 222 DMINRGVLNTRDIKLFVLDEAD 243
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/84 (38%), Positives = 53/84 (63%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P LV+APTRELA+Q+ + S + C++GG P Q + G+++++ TPGR
Sbjct: 148 PKVLVMAPTRELAKQVGNEFENL--KSNLEVYCIYGGMPYEPQENAINSGLDVLVGTPGR 205
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
++DF+ +GT +L + ++VLDE D
Sbjct: 206 ILDFMRQGTLDLSKLKHVVLDEVD 229
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +2
Query: 509 RMLDMGFEPQIRKII----EQIRPDR-QTLMWSATWP 604
RMLDMGF + +++ + R D+ QTL++SAT P
Sbjct: 230 RMLDMGFAESVEEVLAASYAEDREDKPQTLLFSATLP 266
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 69.3 bits (162), Expect = 3e-12
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P+AL +APTRELA+QI A F + ++ +GG QA LERG ++ TPGR
Sbjct: 553 PLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQASQLERGCHFLVGTPGR 612
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
L DF+ + L +L+LDEAD
Sbjct: 613 LQDFVSREKIYLGSIQHLILDEAD 636
Score = 60.9 bits (141), Expect = 9e-10
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 5/215 (2%)
Frame = +2
Query: 8 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPA 187
VSG I F E F + + + GY+ PTP+Q PI M+G++L+ A+
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 188 KRWPTSCQPLCT*TTNRLFGEVRSD-CFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVW 364
K L + L RS + + ++ +F H VC
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYG 588
Query: 365 WCS*KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIR 544
S + L G + F+ + L ++ RMLD+GF P I
Sbjct: 589 GVSVPYQASQLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPDIH 648
Query: 545 KIIEQ----IRPDRQTLMWSATWPKEVKKLAEGLL 637
K+IE+ + RQTLM+SAT+P E++ LA L
Sbjct: 649 KLIEESNMTAKESRQTLMFSATFPDEIQHLAGSFL 683
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQ 234
+QTGSGKT AY+LP + + Q
Sbjct: 523 AQTGSGKTAAYMLPVLTSLIKQ 544
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/84 (44%), Positives = 45/84 (53%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P ALVL+PTRELA QIQ+V G V+ GG E R L+ G IV TPGR
Sbjct: 66 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 125
Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
+ D + + + LVLDEAD
Sbjct: 126 VFDMIRRRNLRTRSIKMLVLDEAD 149
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 622
ML+ GF+ QI + + P Q ++ SAT P E+ ++
Sbjct: 151 MLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEM 187
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 65.3 bits (152), Expect = 4e-11
Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL+L PTRELA QI + G V+ + GG QA L + I+IATPGRLI
Sbjct: 35 ALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLI 94
Query: 444 DFLE--KGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTDR 578
D LE KG +L+ YLV+DEAD I +++ + E + + +T R
Sbjct: 95 DHLENTKG-FSLRTLKYLVMDEAD--RILNMDFEKEDYIHRVGRTAR 138
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 64.5 bits (150), Expect = 7e-11
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
G A+VL PTRELA QI G ++ + GG +QA L +VIATPG
Sbjct: 75 GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPG 134
Query: 435 RLIDFLEK-GTTNLQRCTYLVLDEAD 509
RL D ++ T NL++ +LVLDEAD
Sbjct: 135 RLADHIKSTDTLNLKKIQFLVLDEAD 160
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 598
R+LD F ++ I + + RQTL++SAT
Sbjct: 161 RLLDPSFGDDLKVIFDAVPEKRQTLLFSAT 190
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/95 (35%), Positives = 54/95 (56%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P A ++ P RELA QI + A H + R+ + GG ++ DLE V++++ATPG
Sbjct: 456 PRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPGT 515
Query: 438 LIDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKS 542
L+ + +K T+LV+DEAD ++D + KS
Sbjct: 516 LLKYRQKDRLFFSDLTHLVIDEADT--MFDASFKS 548
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRG 252
+QTGSGKTLAY+ P +VH + R G
Sbjct: 422 AQTGSGKTLAYLAP-LVHRLREDEERHG 448
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +3
Query: 321 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 500
DF + S R V+GGA Q R+L+R +++ATPGRL+D +++G L +LVLD
Sbjct: 947 DFSYRSLCRPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLD 1006
Query: 501 EAD 509
EAD
Sbjct: 1007 EAD 1009
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQ-IRPD---RQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
RMLDMGFEPQIR+I++Q P RQTLM+SAT+PKE++ LA L F ++
Sbjct: 1010 RMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLENYIFLAV 1064
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 35 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
I FE+ + + + V GYK+PTP+Q PI ++L+ A+
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQ 920
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPP 240
+QTGSGKT A+++P + I + P
Sbjct: 919 AQTGSGKTAAFLIPILSRIYMEGP 942
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 58.8 bits (136), Expect = 4e-09
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 240 YSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 419
+ R G ++++PTREL+ Q VA D + GG ++ +A L++GV ++
Sbjct: 639 FKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLL 698
Query: 420 IATPGRLIDFLEKGTTNL-QRCTYLVLDEAD 509
IATPGRL+D L+ L + LV+DEAD
Sbjct: 699 IATPGRLLDHLQNTQGFLYKNLQCLVIDEAD 729
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/40 (45%), Positives = 30/40 (75%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
R+L++GFE ++R+II + RQT+++SAT K V+ LA+
Sbjct: 730 RILEIGFEEEMRQIIRILPSKRQTVLFSATQTKNVEDLAK 769
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 77 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
QG+K MG+ T IQ + + G++L+G AK
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAK 617
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 85 KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAI 216
KD G +A ++ ++TGSGKTLA+++P +
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVV 631
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-------VEIVI 422
ALVL PTRELA Q Q+ + G + GG ++ L V +++
Sbjct: 118 ALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIV 177
Query: 423 ATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
ATPGR++D ++K ++ +C LV+DEAD
Sbjct: 178 ATPGRVLDLMKKKLADMSKCQMLVMDEAD 206
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAK 190
FE+ + G+ G+ +P+PIQ + P+A++G++++ AK K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-------VEIVI 422
ALVL PTRELA Q Q+ + G + GG ++ L V +++
Sbjct: 118 ALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIV 177
Query: 423 ATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
ATPGR++D ++K ++ +C LV+DEAD
Sbjct: 178 ATPGRVLDLMKKKLADMSKCQMLVMDEAD 206
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 44 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAK 190
FE+ + G+ G+ +P+PIQ + P+A++G++++ AK K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +2
Query: 521 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
MGFEP+I+KI+ IRPDRQT+M SATWP V+++A+
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMAD 36
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 54.4 bits (125), Expect = 8e-08
Identities = 22/58 (37%), Positives = 38/58 (65%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++GVA+
Sbjct: 89 ISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAE 146
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
GP AL+LAPTRELAQQI++ FG +R V GGA +
Sbjct: 178 GPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGADR 218
Score = 35.9 bits (79), Expect = 0.030
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 24/67 (35%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIE-----QIRPD-------------------RQTLMWSATWPKEVK 616
RM+DMGFEP+++KI+E ++PD RQT+M++AT P +V+
Sbjct: 218 RMIDMGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMFTATMPPQVE 277
Query: 617 KLAEGLL 637
+LA+ L
Sbjct: 278 RLAKNYL 284
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRR 249
++TGSGKT A+ +P +V I P I R
Sbjct: 145 AETGSGKTAAFAIPLLVWIMGLPKIER 171
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 51.2 bits (117), Expect = 7e-07
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
P ALVL+PTRELA QIQ+V G V+ GG E R L+ G IV TPGR
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 63
Query: 438 L 440
+
Sbjct: 64 V 64
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 51.2 bits (117), Expect = 7e-07
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP-KREQARDLERGVEIVIATPGRL 440
ALV++PTRELA Q +V G+ + + GG K EQ R ++ IV+ TPGRL
Sbjct: 125 ALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMK--TNIVVCTPGRL 182
Query: 441 IDFLEKGTTNLQRCT---YLVLDEAD 509
+ +++ T N CT LVLDEAD
Sbjct: 183 LQHMDE-TPNFD-CTSLQILVLDEAD 206
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
R+LDMGF P + IIE + +RQTL++SAT + VK LA
Sbjct: 207 RILDMGFAPTLNAIIENLPSERQTLLYSATQTRSVKDLA 245
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 35 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
++ F + G+ G+ PT IQ QG P+A+SG++++G AK
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAK 95
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = +3
Query: 261 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 440
+AL++APTRELA Q++ + V+ + GG +Q R L++ EIV+ATPGRL
Sbjct: 220 LALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRL 279
Query: 441 IDFLEKGTTN 470
+ + + T+
Sbjct: 280 WELISQVFTH 289
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHI 225
++TGSGKTLA+ +P I HI
Sbjct: 175 AETGSGKTLAFGIPIIQHI 193
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 408 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
V +V+ + EK +N+Q YLV+DEAD
Sbjct: 316 VVVVVVVVDTSVTNQEKHVSNIQLLRYLVIDEAD 349
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM+DMGFE +R I + RQTL++SAT PK+++ A+ L
Sbjct: 27 RMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSAL 69
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RM+DMGFE +R I + RQTL++SAT PK+++ A+ L
Sbjct: 27 RMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSAL 69
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGV-EIVIATPGRL 440
LV+ TRELA QI + F + S ++ FGG ++ + L+ IV+ TPGR+
Sbjct: 119 LVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRI 178
Query: 441 IDFLEKGTTNLQRCTYLVLDEAD 509
+ + T NL+ + +LDE D
Sbjct: 179 LALTREKTLNLKHAKHFILDECD 201
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 22/106 (20%)
Frame = +3
Query: 258 PIALVLAPTRELAQQI---------------------QQVAADFGH-TSYVRNTCVFGGA 371
P+AL+L PTREL QQ+ Q V D T+ + V GG
Sbjct: 146 PVALILTPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQSVIYDTQQFTARYKAVAVCGGV 205
Query: 372 PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
P Q L G ++V+ATPGRL+D L + TYLV+DE D
Sbjct: 206 PVSTQTIALREGADVVVATPGRLLD--------LYKITYLVMDEPD 243
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRV 181
+ + G + PI+ F + N P + + ++ PTPIQ Q MSG++++G+A+
Sbjct: 60 IHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETG 119
Query: 182 PAKRWPTSCQPLC 220
K S PLC
Sbjct: 120 SGKTLAYSL-PLC 131
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPD---RQTLMWSATWPKEVKKLA 625
RML MG E Q+RKI+ RQTL+WSAT P+ +++LA
Sbjct: 244 RMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLA 285
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
++TGSGKTLAY LP + + + P G+
Sbjct: 116 AETGSGKTLAYSLPLCMLLRTKAPSNPGD 144
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGV-EIVIATPGRL 440
LV+ TRELA QI + F + S ++ FGG ++ + L+ IV+ TPGR+
Sbjct: 119 LVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRI 178
Query: 441 IDFLEKGTTNLQRCTYLVLDEAD 509
+ + T NL+ + +LDE D
Sbjct: 179 LALTREKTLNLKHAKHFILDECD 201
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
RMLDMGF IR+++ ++ RQ L++SAT+ ++K LAE LL
Sbjct: 14 RMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLL 56
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 GPIALVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 431
GP+ L+L + ++ V D + R +FGG + ++ L G E+++ATP
Sbjct: 263 GPLVLILCTNWQNTARVYGVCEDLIRNRRRTRVQMIFGGGAEEDRIVPLINGCEVLVATP 322
Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEADV 512
+ L++ T+L R ++V D+AD+
Sbjct: 323 PCFLRMLKRCYTSLDRLCHVVFDDADM 349
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRV 181
V + G P + F +Y + +G PT +Q WP + G+++ GVA
Sbjct: 179 VLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIEG 234
Query: 182 PAKR 193
KR
Sbjct: 235 SGKR 238
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +2
Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRS 658
ML +GFE Q+++I+E++ RQT+++SAT P ++ +A LL F S
Sbjct: 291 MLQLGFEQQVQQILERLSNRRQTMLFSATIPPSIEAMASRLLNAPVFIS 339
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/68 (30%), Positives = 36/68 (52%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRV 181
+ V G V +P+ F +F + + + + GY PTPIQ Q P+ +SG++++ A
Sbjct: 184 IKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTG 243
Query: 182 PAKRWPTS 205
K P+S
Sbjct: 244 SGKLLPSS 251
Score = 36.7 bits (81), Expect = 0.017
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 399 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
E GV++++ATPGR+++ + + +L V+DE D
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVD 289
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 166
+ V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+ G G
Sbjct: 147 IYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPLMAHGPKKSG 205
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVR-NTCVFGGAPKREQARDLERGVEIVIATPGRL 440
A+V++PTRELAQQI + R + A + +I++ TP RL
Sbjct: 208 AVVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRL 267
Query: 441 IDFL--EKGTTNLQRCTYLVLDEAD 509
+ L E L +L+LDEAD
Sbjct: 268 VHLLTQEPPGIELHNVEWLILDEAD 292
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 44.4 bits (100), Expect = 8e-05
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Frame = +3
Query: 258 PIALVLAPTRELAQQIQQVAADFG-HTSYVR-NTCVFGGA-PKREQARDLERGVEIVIAT 428
P + L+PT ELA+Q +VA G H +++ N V G P+ ++ D I+I T
Sbjct: 174 PQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQKCTD-----HIIIGT 228
Query: 429 PGRLIDFLEKGTT-NLQRCTYLVLDEADV 512
PG L+D++ K ++ + VLDEAD+
Sbjct: 229 PGTLLDWIRKSKCFEPRKVSVFVLDEADI 257
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = +3
Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
AL+L+PTRELA Q Q+ + G + ++++ + GG + V+ATPGR +
Sbjct: 354 ALILSPTRELALQTQKFIKELGRFTGLKSSVILGG--------------DSVVATPGRFL 399
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
+ + L Y+V DEAD
Sbjct: 400 HVVMEMELKLSSVEYVVFDEAD 421
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLI 443
++L PTRE+A Q++ V G Y C VF G E+ + + I + TPGR+
Sbjct: 85 IILTPTREIAVQVKDVICAIG-CHYDGLACKVFIGGISLEEDKKALKSCHIAVGTPGRVK 143
Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
+E+ + +LDEAD
Sbjct: 144 YLIEQKYLKTESVRMFILDEAD 165
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTF 652
++LD F+ QI I + ++Q + +SAT+P+ + + + E TF
Sbjct: 166 KLLDESFQQQINWIFSALPENKQMMAFSATYPEVLANHLKKYMTEPTF 213
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 2 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
V VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ A+
Sbjct: 122 VLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQ 179
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 348 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG 461
+ C+ GG RE LE GV +V+ TPGR+ D + +G
Sbjct: 6 HACI-GGTNVREDRMKLEEGVHVVVGTPGRVFDMINRG 42
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 267 LVLAPTRELAQQ-IQQVAADFGHTSYVRNTCVFGGAPKREQA-RDLERGVEIVIATPGRL 440
+++ PTRELA Q + +V+ G S V + ++E+ +D IVI TP RL
Sbjct: 229 IIVVPTRELASQMLYEVSRLLGDKSIVASFVSGVDLSRQEKLLKDSLHPPRIVIGTPKRL 288
Query: 441 IDFLEKGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLS 557
+ +++ QR +V+DE D + S+K ++
Sbjct: 289 WEIVQEHEHLFQRTKRIVIDEVDKTLLPVHQRSSQKKIA 327
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 79 RCKDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAI 216
+ K G+ + L + K +S+TG+GK+L ++LP++
Sbjct: 174 KLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV 219
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 408 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
V+IV TPG+L DF+ +L + + +LDEAD
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEAD 169
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 393 DLERGVEIVIATPGRLIDFL 452
+L+RG EI++ TPGR+ID L
Sbjct: 3 ELKRGAEIIVCTPGRMIDML 22
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 77 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
+ V +G+ PTPIQA P+A+ GK++ A
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACA 54
>SB_47383| Best HMM Match : LON (HMM E-Value=1.3)
Length = 1528
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -3
Query: 574 SVWAYLLNDFSDLWFKSHIQHTSASSRTKYVHRCKLVVPFSKKS 443
S + Y L++F DL FK+ +T TK+ + C+L+V S++S
Sbjct: 411 SQYCYTLDEFEDLTFKT--SNTGCMYLTKFFNYCQLIVDKSQES 452
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 20 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 133
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_39160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 ERGVEIVIATPGRLIDFLEKGTTNLQ-RCTYLVLDEADVCWIWDLNHKSEKSLSKYAQTD 575
+RGV++ + P ++ D + T L+ RC Y+V D W NH E +L+++ +
Sbjct: 79 KRGVKVDLGFPDQMWDTPDAEVTRLKNRCEYMVEQHEDDITEWYWNHPDE-NLTQWLCIE 137
Query: 576 RL 581
R+
Sbjct: 138 RV 139
>SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 553 NDFSDLWFKSHIQHTSASSRTKYVHRCKLVVPFSKKSINLPGVAMTISTPLSKSRA 386
+D +WF +Q SSRTK + C+ + PF +++ + T S + +SR+
Sbjct: 60 SDVLTIWFYVGVQFYIMSSRTKGIFFCRYIWPFMSVPLSV-SIFTTSSMAVVRSRS 114
>SB_53319| Best HMM Match : zf-CW (HMM E-Value=7.7e-17)
Length = 714
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 418 TISTPLSKSRACSLLGAPPNTHVLRT*DVCPKS-AATC*ICCANSLVGAKTKAIGPH 251
T STPLS + A L P T + + PKS AAT + A TK IG H
Sbjct: 498 TPSTPLSPNTATPLTSPGPQTTPSQFVKISPKSVAATSATGAQTHVTQATTKPIGVH 554
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 348 YEHKMCVQNLQQLAEFVVLTLW*APRPKQSDLTSPNRRLV 229
Y H C QNL + E V+ + A P+ S++ S + ++
Sbjct: 59 YLHNRCFQNLMETGESTVVFFYDAISPEDSNVVSQSLEVI 98
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 657 DLNVVSPSNPSASFFTSLGQVADHIKVC---LSGRICSMIFLICGSNPISN 514
++N P NP + T L ++AD+ VC SG CS+ C +NP N
Sbjct: 2242 NINECDP-NPCLNGATCLDKIADYACVCPSGYSGINCSVNVNDCRTNPCEN 2291
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,703,024
Number of Sequences: 59808
Number of extensions: 512823
Number of successful extensions: 1169
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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