Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0817
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    73   6e-15
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.7  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   5.0  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   8.7  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   8.7  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 73.3 bits (172), Expect = 6e-15
 Identities = 34/104 (32%), Positives = 57/104 (54%)
 Frame = +3

Query: 198 LHLASHCAHKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 377
           L +  H   K+ +       P  +++APTRELA QI      F H + ++    +GG   
Sbjct: 230 LPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAV 289

Query: 378 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           + Q + +  G  +++ATPGRL+DF+++G    +   ++VLDEAD
Sbjct: 290 QHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEAD 333



 Score = 43.6 bits (98), Expect = 6e-06
 Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLA 625
           RMLDMGF P I K++       +  RQTLM+SAT+P E+++LA
Sbjct: 334 RMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELA 376



 Score = 40.7 bits (91), Expect = 4e-05
 Identities = 19/58 (32%), Positives = 32/58 (55%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+  A+
Sbjct: 162 VRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQ 219



 Score = 30.3 bits (65), Expect = 0.057
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHI 225
           +QTGSGKT A++LP I H+
Sbjct: 218 AQTGSGKTAAFMLPMIHHL 236


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 438 LIDFLEKGTTNLQRCTYLVLDE 503
           L+ ++E+GT  +Q  + L++DE
Sbjct: 133 LLQYIEQGTVRVQDISLLIVDE 154


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 573 LSGRICSMIFLICGSNPISNIRQPHQELNM 484
           ++ ++C++IF+I  S   S +  P + LN+
Sbjct: 5   ITSKVCALIFIILFSTYDSVVLYPEEYLNI 34


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 360 THTCYEHKMCVQNLQQLAEFVVLTL 286
           ++ C EH++CV  + Q   F  +TL
Sbjct: 199 SYACPEHELCVGRIAQELGFQHVTL 223


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 360 THTCYEHKMCVQNLQQLAEFVVLTL 286
           ++ C EH++CV  + Q   F  +TL
Sbjct: 199 SYACPEHELCVGRIAQELGFQHVTL 223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,098
Number of Sequences: 2352
Number of extensions: 16635
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)