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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0817
         (666 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g55150.1 68414.m06298 DEAD box RNA helicase, putative (RH20) ...   127   8e-30
At5g63120.2 68418.m07924 ethylene-responsive DEAD box RNA helica...   123   1e-28
At5g63120.1 68418.m07925 ethylene-responsive DEAD box RNA helica...   123   1e-28
At3g01540.3 68416.m00084 DEAD box RNA helicase (DRH1) identical ...   111   5e-25
At3g01540.2 68416.m00083 DEAD box RNA helicase (DRH1) identical ...   111   5e-25
At3g01540.1 68416.m00082 DEAD box RNA helicase (DRH1) identical ...   111   5e-25
At5g14610.1 68418.m01713 DEAD box RNA helicase, putative similar...   103   8e-23
At3g06480.1 68416.m00750 DEAD box RNA helicase, putative similar...   102   2e-22
At3g58570.1 68416.m06528 DEAD box RNA helicase, putative similar...    93   2e-19
At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar...    92   3e-19
At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar...    91   8e-19
At2g47330.1 68415.m05908 DEAD/DEAH box helicase, putative simila...    89   2e-18
At3g58510.2 68416.m06522 DEAD box RNA helicase, putative (RH11) ...    87   1e-17
At3g58510.1 68416.m06521 DEAD box RNA helicase, putative (RH11) ...    87   1e-17
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar...    84   7e-17
At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative simila...    83   2e-16
At3g22330.1 68416.m02820 DEAD box RNA helicase, putative similar...    82   4e-16
At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative simila...    81   5e-16
At3g22310.1 68416.m02818 DEAD box RNA helicase, putative (RH9) s...    80   2e-15
At5g26742.1 68418.m03161 DEAD box RNA helicase (RH3) nearly iden...    77   1e-14
At5g51280.1 68418.m06357 DEAD-box protein abstrakt, putative           75   4e-14
At3g02065.2 68416.m00170 DEAD/DEAH box helicase family protein c...    74   7e-14
At3g02065.1 68416.m00171 DEAD/DEAH box helicase family protein c...    74   7e-14
At4g33370.1 68417.m04744 DEAD-box protein abstrakt, putative RNA...    73   2e-13
At3g13920.1 68416.m01758 eukaryotic translation initiation facto...    72   3e-13
At1g72730.1 68414.m08410 eukaryotic translation initiation facto...    72   3e-13
At4g09730.1 68417.m01598 DEAD/DEAH box helicase, putative RNA he...    72   4e-13
At1g54270.1 68414.m06187 eukaryotic translation initiation facto...    71   9e-13
At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly id...    67   9e-12
At3g61240.2 68416.m06854 DEAD/DEAH box helicase, putative (RH12)...    65   3e-11
At3g61240.1 68416.m06853 DEAD/DEAH box helicase, putative (RH12)...    65   3e-11
At4g00660.2 68417.m00091 DEAD/DEAH box helicase, putative simila...    65   5e-11
At4g00660.1 68417.m00090 DEAD/DEAH box helicase, putative simila...    65   5e-11
At1g51380.1 68414.m05780 eukaryotic translation initiation facto...    64   6e-11
At2g45810.1 68415.m05697 DEAD/DEAH box helicase, putative              64   1e-10
At1g77050.1 68414.m08971 DEAD/DEAH box helicase, putative simila...    64   1e-10
At3g19760.1 68416.m02501 eukaryotic translation initiation facto...    62   3e-10
At4g16630.1 68417.m02514 DEAD/DEAH box helicase, putative (RH28)...    59   2e-09
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai...    59   3e-09
At3g18600.1 68416.m02364 DEAD/DEAH box helicase, putative non-co...    59   3e-09
At3g06980.1 68416.m00829 DEAD/DEAH box helicase, putative contai...    59   3e-09
At5g60990.1 68418.m07651 DEAD/DEAH box helicase, putative (RH10)...    58   5e-09
At2g40700.1 68415.m05021 DEAD/DEAH box helicase, putative (RH17)...    58   7e-09
At3g16840.1 68416.m02150 DEAD/DEAH box helicase, putative (RH13)...    57   9e-09
At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18)       52   3e-07
At1g16280.1 68414.m01949 DEAD/DEAH box helicase, putative simila...    51   8e-07
At1g71370.1 68414.m08239 DEAD/DEAH box helicase, putative simila...    50   1e-06
At1g12770.1 68414.m01482 DEAD/DEAH box helicase family protein /...    49   3e-06
At5g63630.1 68418.m07989 DEAD box RNA helicase, putative strong ...    48   4e-06
At1g63250.1 68414.m07150 DEAD box RNA helicase, putative similar...    48   4e-06
At2g07750.1 68415.m01003 DEAD box RNA helicase, putative similar...    48   7e-06
At5g08610.1 68418.m01024 DEAD box RNA helicase (RH26) strong sim...    47   1e-05
At5g08620.1 68418.m01025 DEAD box RNA helicase (RH25) identical ...    44   9e-05
At3g09720.1 68416.m01151 DEAD/DEAH box helicase, putative simila...    42   3e-04
At5g54910.1 68418.m06839 DEAD/DEAH box helicase, putative              41   6e-04
At4g15850.1 68417.m02410 DEAD/DEAH box helicase, putative simila...    41   9e-04
At5g11200.1 68418.m01309 DEAD/DEAH box helicase, putative              40   0.001
At5g11170.2 68418.m01306 DEAD/DEAH box helicase, putative (RH15)...    40   0.001
At5g11170.1 68418.m01305 DEAD/DEAH box helicase, putative (RH15)...    40   0.001
At3g53110.1 68416.m05853 DEAD/DEAH box helicase, putative RNA he...    38   0.006
At1g71280.1 68414.m08226 DEAD/DEAH box helicase, putative contai...    37   0.010
At2g28600.1 68415.m03476 expressed protein                             35   0.042
At5g19210.2 68418.m02287 DEAD/DEAH box helicase, putative EUKARY...    35   0.056
At4g34910.1 68417.m04950 DEAD/DEAH box helicase, putative (RH16)...    31   0.52 
At1g09010.1 68414.m01005 glycoside hydrolase family 2 protein lo...    29   2.8  
At1g59990.1 68414.m06758 DEAD/DEAH box helicase, putative (RH22)...    28   4.9  
At4g21390.1 68417.m03090 S-locus lectin protein kinase family pr...    28   6.4  
At1g11920.1 68414.m01376 pectate lyase family protein similar to...    27   8.5  

>At1g55150.1 68414.m06298 DEAD box RNA helicase, putative (RH20)
           similar to ethylene-responsive RNA helicase GI:5669638
           from [Lycopersicon esculentum]; contains Pfam profiles
           PF00270: DEAD/DEAH box helicase, PF00271: Helicase
           conserved C-terminal domain
          Length = 501

 Score =  127 bits (306), Expect = 8e-30
 Identities = 59/85 (69%), Positives = 69/85 (81%)
 Frame = +3

Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
           GPI LVLAPTRELA QIQQ A+ FG +S ++ TC++GG PK  Q RDL++GVEIVIATPG
Sbjct: 172 GPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPG 231

Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
           RLID +E   TNL+R TYLVLDEAD
Sbjct: 232 RLIDMMESNNTNLRRVTYLVLDEAD 256



 Score = 77.4 bits (182), Expect = 8e-15
 Identities = 29/58 (50%), Positives = 44/58 (75%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           +TV G ++  P++ F +  FPDYV + VK  G+ EPTPIQ+QGWP+AM G++L+G+A+
Sbjct: 87  ITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAE 144



 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 32/43 (74%), Positives = 38/43 (88%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           RMLDMGF+PQIRKI+  IRPDRQTL WSATWPKEV++L++  L
Sbjct: 257 RMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFL 299



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 18/29 (62%), Positives = 25/29 (86%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
           ++TGSGKTL+Y+LPAIVH+N QP +  G+
Sbjct: 143 AETGSGKTLSYLLPAIVHVNAQPMLAHGD 171


>At5g63120.2 68418.m07924 ethylene-responsive DEAD box RNA helicase,
           putative (RH30) strong similarity to ethylene-responsive
           RNA helicase [Lycopersicon esculentum] GI:5669638;
           contains Pfam profiles PF00270: DEAD/DEAH box helicase,
           PF00271: Helicase conserved C-terminal domain
          Length = 591

 Score =  123 bits (296), Expect = 1e-28
 Identities = 61/85 (71%), Positives = 68/85 (80%)
 Frame = +3

Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
           GPI L+LAPTRELA QIQ+ +  FG  S VR+TC++GGAPK  Q RDL RGVEIVIATPG
Sbjct: 238 GPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 297

Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
           RLID LE   TNL+R TYLVLDEAD
Sbjct: 298 RLIDMLECQHTNLKRVTYLVLDEAD 322



 Score = 79.0 bits (186), Expect = 3e-15
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           RMLDMGFEPQIRKI+ QIRPDRQTL+WSATWP+EV+ LA   L
Sbjct: 323 RMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFL 365



 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 27/58 (46%), Positives = 46/58 (79%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           ++V G +V  P++ F++ANFPD + + +  +G+ EPTPIQAQGWP+A+ G++L+G+A+
Sbjct: 153 ISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAE 210



 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 16/23 (69%), Positives = 22/23 (95%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHINNQP 237
           ++TGSGKTLAY+LPA+VH++ QP
Sbjct: 209 AETGSGKTLAYLLPALVHVSAQP 231


>At5g63120.1 68418.m07925 ethylene-responsive DEAD box RNA helicase,
           putative (RH30) strong similarity to ethylene-responsive
           RNA helicase [Lycopersicon esculentum] GI:5669638;
           contains Pfam profiles PF00270: DEAD/DEAH box helicase,
           PF00271: Helicase conserved C-terminal domain
          Length = 484

 Score =  123 bits (296), Expect = 1e-28
 Identities = 61/85 (71%), Positives = 68/85 (80%)
 Frame = +3

Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
           GPI L+LAPTRELA QIQ+ +  FG  S VR+TC++GGAPK  Q RDL RGVEIVIATPG
Sbjct: 238 GPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 297

Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
           RLID LE   TNL+R TYLVLDEAD
Sbjct: 298 RLIDMLECQHTNLKRVTYLVLDEAD 322



 Score = 79.0 bits (186), Expect = 3e-15
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           RMLDMGFEPQIRKI+ QIRPDRQTL+WSATWP+EV+ LA   L
Sbjct: 323 RMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFL 365



 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 27/58 (46%), Positives = 46/58 (79%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           ++V G +V  P++ F++ANFPD + + +  +G+ EPTPIQAQGWP+A+ G++L+G+A+
Sbjct: 153 ISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAE 210



 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 16/23 (69%), Positives = 22/23 (95%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHINNQP 237
           ++TGSGKTLAY+LPA+VH++ QP
Sbjct: 209 AETGSGKTLAYLLPALVHVSAQP 231


>At3g01540.3 68416.m00084 DEAD box RNA helicase (DRH1) identical to
           RNA helicase DRH1 GB:BAA28347 GI:3149952 [Arabidopsis
           thaliana]; contains Pfam profiles PF00270: DEAD/DEAH box
           helicase, PF00271: Helicase conserved C-terminal domain
          Length = 619

 Score =  111 bits (266), Expect = 5e-25
 Identities = 55/96 (57%), Positives = 67/96 (69%)
 Frame = +3

Query: 222 HKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 401
           H Q      R GP  LVL+PTRELA QIQ+ A  FG +S +  TC++GGAPK  Q RDLE
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278

Query: 402 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           RG +IV+ATPGRL D LE    +L++ +YLVLDEAD
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLRQISYLVLDEAD 314



 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           RMLDMGFEPQIRKI+++I   RQTLM++ATWPK V+K+A  LL
Sbjct: 315 RMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLL 357



 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 28/58 (48%), Positives = 39/58 (67%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           +TVSG +V  P+  FE   FP  + + V + G+  PTPIQAQ WPIAM G+++V +AK
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAK 203



 Score = 30.7 bits (66), Expect = 0.91
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHI 225
           ++TGSGKTL Y++P  +H+
Sbjct: 202 AKTGSGKTLGYLIPGFLHL 220


>At3g01540.2 68416.m00083 DEAD box RNA helicase (DRH1) identical to
           RNA helicase DRH1 GB:BAA28347 GI:3149952 [Arabidopsis
           thaliana]; contains Pfam profiles PF00270: DEAD/DEAH box
           helicase, PF00271: Helicase conserved C-terminal domain
          Length = 619

 Score =  111 bits (266), Expect = 5e-25
 Identities = 55/96 (57%), Positives = 67/96 (69%)
 Frame = +3

Query: 222 HKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 401
           H Q      R GP  LVL+PTRELA QIQ+ A  FG +S +  TC++GGAPK  Q RDLE
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278

Query: 402 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           RG +IV+ATPGRL D LE    +L++ +YLVLDEAD
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLRQISYLVLDEAD 314



 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           RMLDMGFEPQIRKI+++I   RQTLM++ATWPK V+K+A  LL
Sbjct: 315 RMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLL 357



 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 28/58 (48%), Positives = 39/58 (67%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           +TVSG +V  P+  FE   FP  + + V + G+  PTPIQAQ WPIAM G+++V +AK
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAK 203



 Score = 30.7 bits (66), Expect = 0.91
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHI 225
           ++TGSGKTL Y++P  +H+
Sbjct: 202 AKTGSGKTLGYLIPGFLHL 220


>At3g01540.1 68416.m00082 DEAD box RNA helicase (DRH1) identical to
           RNA helicase DRH1 GB:BAA28347 GI:3149952 [Arabidopsis
           thaliana]; contains Pfam profiles PF00270: DEAD/DEAH box
           helicase, PF00271: Helicase conserved C-terminal domain
          Length = 618

 Score =  111 bits (266), Expect = 5e-25
 Identities = 55/96 (57%), Positives = 67/96 (69%)
 Frame = +3

Query: 222 HKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 401
           H Q      R GP  LVL+PTRELA QIQ+ A  FG +S +  TC++GGAPK  Q RDLE
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278

Query: 402 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           RG +IV+ATPGRL D LE    +L++ +YLVLDEAD
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLRQISYLVLDEAD 314



 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           RMLDMGFEPQIRKI+++I   RQTLM++ATWPK V+K+A  LL
Sbjct: 315 RMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLL 357



 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 28/58 (48%), Positives = 39/58 (67%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           +TVSG +V  P+  FE   FP  + + V + G+  PTPIQAQ WPIAM G+++V +AK
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAK 203



 Score = 30.7 bits (66), Expect = 0.91
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHI 225
           ++TGSGKTL Y++P  +H+
Sbjct: 202 AKTGSGKTLGYLIPGFLHL 220


>At5g14610.1 68418.m01713 DEAD box RNA helicase, putative similar to
           RNA helicase DRH1 [Arabidopsis thaliana] GI:3149952;
           contains Pfam profiles PF00270: DEAD/DEAH box helicase,
           PF00271: Helicase conserved C-terminal domain, PF00397:
           WW domain
          Length = 713

 Score =  103 bits (248), Expect = 8e-23
 Identities = 52/96 (54%), Positives = 65/96 (67%)
 Frame = +3

Query: 222 HKQPTAYSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 401
           H Q      R GP  LVL+PTRELA QIQ  A  FG +S +   C++GGAPK  Q +++E
Sbjct: 290 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 349

Query: 402 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           RGV+IV+ATPGRL D LE    +L + +YLVLDEAD
Sbjct: 350 RGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEAD 385



 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           RMLDMGFEPQIRKI+ ++   RQTLM++ATWPKEV+K+A  LL
Sbjct: 386 RMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLL 428



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 16/31 (51%), Positives = 23/31 (74%)
 Frame = +2

Query: 83  VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           V + G+  P+PIQAQ WPIAM  +++V +AK
Sbjct: 244 VYSAGFSAPSPIQAQSWPIAMQNRDIVAIAK 274



 Score = 30.7 bits (66), Expect = 0.91
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHI 225
           ++TGSGKTL Y++P  +H+
Sbjct: 273 AKTGSGKTLGYLIPGFMHL 291


>At3g06480.1 68416.m00750 DEAD box RNA helicase, putative similar to
           RNA helicase DRH1 [Arabidopsis thaliana] GI:3149952;
           contains Pfam profiles PF00270: DEAD/DEAH box helicase,
           PF00271: Helicase conserved C-terminal domain, PF00397:
           WW domain
          Length = 1088

 Score =  102 bits (245), Expect = 2e-22
 Identities = 50/87 (57%), Positives = 62/87 (71%)
 Frame = +3

Query: 249 R*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 428
           R GP  L+LAPTRELA QIQ  A  FG +S +  TC++GGAPK  Q ++LERG +IV+AT
Sbjct: 505 RNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVAT 564

Query: 429 PGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           PGRL D LE    + Q+ + LVLDEAD
Sbjct: 565 PGRLNDILEMKMIDFQQVSLLVLDEAD 591



 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 32/43 (74%), Positives = 38/43 (88%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           RMLDMGFEPQIRKI+ +I P RQTLM++ATWPKEV+K+A  LL
Sbjct: 592 RMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLL 634



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 35/58 (60%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           VT +G  +  P   FE +  P  + + + + G+  PTPIQAQ WPIA+  +++V +AK
Sbjct: 423 VTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAK 480



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIV 219
           ++TGSGKTL Y++PA +
Sbjct: 479 AKTGSGKTLGYLIPAFI 495


>At3g58570.1 68416.m06528 DEAD box RNA helicase, putative similar to
           SP|O00571 DEAD-box protein 3 (Helicase-like protein 2)
           {Homo sapiens}, DEAD box RNA helicase DDX3 [Homo
           sapiens] GI:3523150; contains Pfam profiles PF00270:
           DEAD/DEAH box helicase, PF00271: Helicase conserved
           C-terminal domain
          Length = 646

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 43/84 (51%), Positives = 59/84 (70%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
           P+A++L+PTRELA QI   A  F + + V+    +GG P  +Q R+LERGV+I++ATPGR
Sbjct: 225 PLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGR 284

Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
           L D LE+G  +LQ   +L LDEAD
Sbjct: 285 LNDLLERGRVSLQMVRFLALDEAD 308



 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
 Frame = +2

Query: 437 IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQI-RPD---RQTLMWSATWP 604
           +N  L +G   L  V   +     RMLDMGFEPQIRKI++Q+  P    RQT+++SAT+P
Sbjct: 285 LNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 344

Query: 605 KEVKKLAEGLLGETTFRSI 661
           +E+++LA   L    F ++
Sbjct: 345 REIQRLASDFLSNYIFLAV 363



 Score = 36.7 bits (81), Expect = 0.014
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           +  SG  V  P+  F E +  + +   ++   Y +PTP+Q    PI  +G++L+  A+
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQ 191


>At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar to
           SP|P23394 Pre-mRNA splicing factor RNA helicase PRP28
           {Saccharomyces cerevisiae}; contains Pfam profiles
           PF00270: DEAD/DEAH box helicase, PF00271: Helicase
           conserved C-terminal domain
          Length = 733

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 47/89 (52%), Positives = 58/89 (65%)
 Frame = +3

Query: 243 SER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 422
           +E  GP A+V+APTRELAQQI++    F H    R T + GG    EQ   + +G EIVI
Sbjct: 385 NETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVI 444

Query: 423 ATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           ATPGRLID LE+    L +C Y+VLDEAD
Sbjct: 445 ATPGRLIDCLERRYAVLNQCNYVVLDEAD 473



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 15/58 (25%), Positives = 35/58 (60%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           ++  G  +  P++ +EE+     + + V+  GYK+P+PIQ    P+ +  ++++G+A+
Sbjct: 301 ISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAE 358



 Score = 34.3 bits (75), Expect = 0.074
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHINNQPPI 243
           ++TGSGKT A++LP + +I+  PP+
Sbjct: 357 AETGSGKTAAFVLPMLAYISRLPPM 381



 Score = 30.7 bits (66), Expect = 0.91
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 17/60 (28%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIE-----QIRPD------------RQTLMWSATWPKEVKKLAEGLL 637
           RM+DMGFEPQ+  +++      ++P+            R T M+SAT P  V++LA   L
Sbjct: 474 RMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYL 533


>At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar to
           SP|O00571 DEAD-box protein 3 (Helicase-like protein 2)
           {Homo sapiens}, DEAD box RNA helicase DDX3 [Homo
           sapiens] GI:3523150; contains Pfam profiles PF00270:
           DEAD/DEAH box helicase, PF00271: Helicase conserved
           C-terminal domain
          Length = 633

 Score = 90.6 bits (215), Expect = 8e-19
 Identities = 41/84 (48%), Positives = 58/84 (69%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
           P+A++L+PTRELA QI   A  F + + V+    +GG P  +Q R+LERGV+I++ATPGR
Sbjct: 238 PLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGR 297

Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
           L D LE+   ++Q   +L LDEAD
Sbjct: 298 LNDLLERARVSMQMIRFLALDEAD 321



 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
           RMLDMGFEPQIRKI+EQ+    R  RQTL++SAT+P+E+++LA   L    F ++
Sbjct: 322 RMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAV 376



 Score = 37.9 bits (84), Expect = 0.006
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           +  SG  V  P+  F E +  + +   ++   Y +PTP+Q    PI + G++L+  A+
Sbjct: 147 IETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQ 204


>At2g47330.1 68415.m05908 DEAD/DEAH box helicase, putative similar
           to RNA helicase [Rattus norvegicus] GI:897915; contains
           Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
           Helicase conserved C-terminal domain
          Length = 760

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 44/85 (51%), Positives = 56/85 (65%)
 Frame = +3

Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
           GPI ++ APTRELA QI   A  F     +R + V+GG  K EQ ++L+ G EIV+ATPG
Sbjct: 301 GPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPG 360

Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
           RLID L+     + R +YLVLDEAD
Sbjct: 361 RLIDMLKMKALTMMRASYLVLDEAD 385



 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 28/45 (62%), Positives = 37/45 (82%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
           RM D+GFEPQ+R I+ QIRPDRQTL++SAT P +V+KLA  +L +
Sbjct: 386 RMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSD 430



 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 23/58 (39%), Positives = 38/58 (65%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           + VSG +VH P++ FE+  F   +   +K   Y++PT IQ Q  PI +SG++++G+AK
Sbjct: 216 IRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAK 273



 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 17/29 (58%), Positives = 24/29 (82%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
           ++TGSGKT A++LP IVHI +QP ++R E
Sbjct: 272 AKTGSGKTAAFVLPMIVHIMDQPELQRDE 300


>At3g58510.2 68416.m06522 DEAD box RNA helicase, putative (RH11)
           similar to RNA helicase DBY protein [Mus musculus]
           GI:3790186, SP|O00571 DEAD-box protein 3 (Helicase-like
           protein 2) {Homo sapiens}; contains Pfam profiles
           PF00270: DEAD/DEAH box helicase, PF00271: Helicase
           conserved C-terminal domain; identical to cDNA DEAD box
           RNA helicase, RH11 GI:3775998
          Length = 612

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 40/84 (47%), Positives = 56/84 (66%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
           P A++L+PTRELA QI   A  F + + V+    +GG P  +Q R+LERG +I++ATPGR
Sbjct: 230 PFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGR 289

Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
           L D LE+   ++Q   +L LDEAD
Sbjct: 290 LNDLLERARVSMQMIRFLALDEAD 313



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
           RMLDMGFEPQIRKI+EQ+    R  RQT+++SAT+P ++++LA   +    F ++
Sbjct: 314 RMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAV 368



 Score = 36.3 bits (80), Expect = 0.018
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           V  SG +V  P+  F + +  D +   ++   Y  PTP+Q    PI ++ ++L+  A+
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQ 196


>At3g58510.1 68416.m06521 DEAD box RNA helicase, putative (RH11)
           similar to RNA helicase DBY protein [Mus musculus]
           GI:3790186, SP|O00571 DEAD-box protein 3 (Helicase-like
           protein 2) {Homo sapiens}; contains Pfam profiles
           PF00270: DEAD/DEAH box helicase, PF00271: Helicase
           conserved C-terminal domain; identical to cDNA DEAD box
           RNA helicase, RH11 GI:3775998
          Length = 612

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 40/84 (47%), Positives = 56/84 (66%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
           P A++L+PTRELA QI   A  F + + V+    +GG P  +Q R+LERG +I++ATPGR
Sbjct: 230 PFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGR 289

Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
           L D LE+   ++Q   +L LDEAD
Sbjct: 290 LNDLLERARVSMQMIRFLALDEAD 313



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
           RMLDMGFEPQIRKI+EQ+    R  RQT+++SAT+P ++++LA   +    F ++
Sbjct: 314 RMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAV 368



 Score = 36.3 bits (80), Expect = 0.018
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           V  SG +V  P+  F + +  D +   ++   Y  PTP+Q    PI ++ ++L+  A+
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQ 196


>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
           RNA helicase [Rattus norvegicus] GI:897915; contains
           Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
           Helicase conserved C-terminal domain
          Length = 1166

 Score = 84.2 bits (199), Expect = 7e-17
 Identities = 45/88 (51%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
 Frame = +3

Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
           GPI LV+APTREL QQI      F     +R   V+GG+   +Q  +L+RG EIV+ TPG
Sbjct: 602 GPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPG 661

Query: 435 RLIDFL--EKG-TTNLQRCTYLVLDEAD 509
           R+ID L    G  TNL+R T+LV+DEAD
Sbjct: 662 RMIDILCTSSGKITNLRRVTFLVMDEAD 689



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 26/45 (57%), Positives = 38/45 (84%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
           RM DMGFEPQI +II+ IRP+RQT+++SAT+P++V+ LA  +L +
Sbjct: 690 RMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNK 734



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 21/56 (37%), Positives = 34/56 (60%)
 Frame = +2

Query: 8   VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           V G +V  PI+++ +      +   +K + Y++P PIQ Q  PI MSG++ +GVAK
Sbjct: 519 VHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAK 574



 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 15/29 (51%), Positives = 23/29 (79%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
           ++TGSGKTL ++LP + HI +QPP+  G+
Sbjct: 573 AKTGSGKTLGFVLPMLRHIKDQPPVEAGD 601


>At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative similar
           to RNA helicase GB:A57514 GI:897915 from [Rattus
           norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH
           box helicase, PF00271: Helicase conserved C-terminal
           domain
          Length = 989

 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
 Frame = +3

Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
           GPI LV+APTREL QQI      F     +    V+GG+   +Q  +L+RG EIV+ TPG
Sbjct: 469 GPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPG 528

Query: 435 RLIDFL--EKG-TTNLQRCTYLVLDEAD 509
           R+ID L    G  TNL+R TYLV+DEAD
Sbjct: 529 RMIDILCTSSGKITNLRRVTYLVMDEAD 556



 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 26/45 (57%), Positives = 38/45 (84%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
           RM DMGFEPQI +I++ IRPDRQT+++SAT+P++V+ LA  +L +
Sbjct: 557 RMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNK 601



 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 23/56 (41%), Positives = 35/56 (62%)
 Frame = +2

Query: 8   VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           V G +V  PIQ++ +      +   +K + Y++P PIQAQ  PI MSG++ +GVAK
Sbjct: 386 VHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAK 441



 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 15/29 (51%), Positives = 23/29 (79%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGE 255
           ++TGSGKTL ++LP + HI +QPP+  G+
Sbjct: 440 AKTGSGKTLGFVLPMLRHIKDQPPVEAGD 468


>At3g22330.1 68416.m02820 DEAD box RNA helicase, putative similar to
           RNA helicases GI:3775995, GI:3775987 from [Arabidopsis
           thaliana]; contains Pfam profiles PF00270: DEAD/DEAH box
           helicase, PF00271: Helicase conserved C-terminal domain
          Length = 616

 Score = 81.8 bits (193), Expect = 4e-16
 Identities = 38/85 (44%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNT-CVFGGAPKREQARDLERGVEIVIATPG 434
           P+ LVLAPTRELA+Q+++   +F  ++   +T C++GG P  +Q R L+ GV++ + TPG
Sbjct: 179 PLCLVLAPTRELARQVEK---EFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPG 235

Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
           R+ID +++G  NL    ++VLDEAD
Sbjct: 236 RVIDLMKRGALNLSEVQFVVLDEAD 260



 Score = 35.1 bits (77), Expect = 0.042
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           +ML +GF   +  I+E++   RQ++M+SAT P  ++ L +  L
Sbjct: 261 QMLQVGFAEDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYL 303


>At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative similar
           to p68 RNA helicase [Schizosaccharomyces pombe]
           GI:173419
          Length = 537

 Score = 81.4 bits (192), Expect = 5e-16
 Identities = 40/89 (44%), Positives = 55/89 (61%)
 Frame = +3

Query: 243 SER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 422
           S++  P  LVL+PTRELA QI  V  + G    +++ CV+GG+ K  Q   +  GV+IVI
Sbjct: 187 SKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVI 246

Query: 423 ATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
            TPGRL D +E     L   +++VLDEAD
Sbjct: 247 GTPGRLRDLIESNVLRLSDVSFVVLDEAD 275



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 23/52 (44%), Positives = 32/52 (61%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSIL 664
           RMLDMGFE  +R I+      RQ +M+SATWP +V KLA+  +     + I+
Sbjct: 276 RMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVII 327



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
 Frame = +2

Query: 2   VTVSGVEV--HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           VT  GVE   +  ++ F E+N P+ V    KT  +++P+PIQ+  WP  + G++L+G+AK
Sbjct: 102 VTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAK 159



 Score = 31.9 bits (69), Expect = 0.39
 Identities = 12/19 (63%), Positives = 18/19 (94%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHI 225
           ++TGSGKTLA+ +PAI+H+
Sbjct: 158 AKTGSGKTLAFGIPAIMHV 176


>At3g22310.1 68416.m02818 DEAD box RNA helicase, putative (RH9)
           similar to RNA helicases GI:3775995, GI:3775987
           [Arabidopsis thaliana]; contains Pfam profiles PF00270:
           DEAD/DEAH box helicase, PF00271: Helicase conserved
           C-terminal domain
          Length = 610

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 37/85 (43%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNT-CVFGGAPKREQARDLERGVEIVIATPG 434
           P  LVLAPTRELA+Q+++   +F  ++   +T C++GG P  +Q R+L  G+++ + TPG
Sbjct: 191 PQCLVLAPTRELARQVEK---EFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPG 247

Query: 435 RLIDFLEKGTTNLQRCTYLVLDEAD 509
           R+ID +++G  NL    ++VLDEAD
Sbjct: 248 RIIDLMKRGALNLSEVQFVVLDEAD 272



 Score = 33.9 bits (74), Expect = 0.098
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           +ML +GF   +  I++++   RQ++M+SAT P  ++ L +  L
Sbjct: 273 QMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSLTKKYL 315



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 85  KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAI 216
           K  G+++      + L  +   ++   R++TG+GKTLA+ +P I
Sbjct: 132 KGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPII 175


>At5g26742.1 68418.m03161 DEAD box RNA helicase (RH3) nearly
           identical to RNA helicase [Arabidopsis thaliana]
           GI:3775987; contains Pfam profiles PF00270: DEAD/DEAH
           box helicase, PF00271: Helicase conserved C-terminal
           domain, PF00098: Zinc knuckle
          Length = 747

 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 39/84 (46%), Positives = 52/84 (61%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
           P  LVLAPTRELA+Q+++   +     Y+   CV+GG     Q   L RGV++V+ TPGR
Sbjct: 181 PKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGR 238

Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
           +ID +E  +  L    YLVLDEAD
Sbjct: 239 IIDLIEGRSLKLGEVEYLVLDEAD 262



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           +ML +GFE  +  I+E +   RQ++++SAT P  VKKLA   L
Sbjct: 263 QMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYL 305


>At5g51280.1 68418.m06357 DEAD-box protein abstrakt, putative 
          Length = 591

 Score = 74.9 bits (176), Expect = 4e-14
 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
 Frame = +3

Query: 255 GPIALVLAPTRELAQQ----IQQVAADFGHTSY--VRNTCVFGGAPKREQARDLERGVEI 416
           GPI L++ P+RELA+Q    ++Q  A      Y  +R+    GG   R Q   ++RGV I
Sbjct: 222 GPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHI 281

Query: 417 VIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           V+ATPGRL D L K   +L  C YL LDEAD
Sbjct: 282 VVATPGRLKDMLAKKKMSLDACRYLTLDEAD 312



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 21/57 (36%), Positives = 38/57 (66%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
           + V+G ++  PI+ F++  FP  V   +K  G  +PTPIQ QG P+ ++G++++G+A
Sbjct: 134 IIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIA 190



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 17/43 (39%), Positives = 29/43 (67%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           R++D+GFE  IR++ +  +  RQTL++SAT P +++  A   L
Sbjct: 313 RLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSAL 355


>At3g02065.2 68416.m00170 DEAD/DEAH box helicase family protein
           contains Pfam profile: PF00270 DEAD/DEAH box helicase
          Length = 505

 Score = 74.1 bits (174), Expect = 7e-14
 Identities = 37/88 (42%), Positives = 50/88 (56%)
 Frame = +3

Query: 246 ER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 425
           +R  P+A+VLAPTREL  Q++  A   G     +   V GG P   Q   +++GVE++I 
Sbjct: 183 QRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIG 242

Query: 426 TPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           TPGR++D L K T  L      VLDE D
Sbjct: 243 TPGRVVDLLSKHTIELDNIMTFVLDEVD 270



 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = +2

Query: 14  GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
           G  V  P+  F     P  +   ++T GY  PTPIQ Q  P A++GK+L+  A
Sbjct: 102 GSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASA 154


>At3g02065.1 68416.m00171 DEAD/DEAH box helicase family protein
           contains Pfam profile: PF00270 DEAD/DEAH box helicase
          Length = 368

 Score = 74.1 bits (174), Expect = 7e-14
 Identities = 37/88 (42%), Positives = 50/88 (56%)
 Frame = +3

Query: 246 ER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 425
           +R  P+A+VLAPTREL  Q++  A   G     +   V GG P   Q   +++GVE++I 
Sbjct: 46  QRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIG 105

Query: 426 TPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           TPGR++D L K T  L      VLDE D
Sbjct: 106 TPGRVVDLLSKHTIELDNIMTFVLDEVD 133


>At4g33370.1 68417.m04744 DEAD-box protein abstrakt, putative RNA
           helicase DBP2 - Saccharomyces cerevisiae, PID:g5272
          Length = 542

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
 Frame = +3

Query: 255 GPIALVLAPTRELAQQ----IQQVAADFGHTSY--VRNTCVFGGAPKREQARDLERGVEI 416
           GPIALV+ P+RELA+Q    ++Q  A      Y  +R+    GG   R Q   +++GV I
Sbjct: 173 GPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHI 232

Query: 417 VIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           V+ATPGRL D L K   +L  C  L LDEAD
Sbjct: 233 VVATPGRLKDILAKKKMSLDACRLLTLDEAD 263



 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 22/57 (38%), Positives = 38/57 (66%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
           +TV+G ++  PI+ F +  FP  + + +K  G   PTPIQ QG P+ +SG++++G+A
Sbjct: 85  ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIA 141



 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 17/43 (39%), Positives = 28/43 (65%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           R++D+GFE  IR + +  +  RQTL++SAT P +++  A   L
Sbjct: 264 RLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSAL 306



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +1

Query: 175 TGSGKTLAYILPAIV 219
           TGSGKTL ++LP I+
Sbjct: 143 TGSGKTLVFVLPMII 157


>At3g13920.1 68416.m01758 eukaryotic translation initiation factor
           4A-1 / eIF-4A-1 eIF-4A-1 gi:15293046, gi:15450485;
           contains Pfam profile PF00270: DEAD/DEAH box helicase;
           contains Pfam profile PF00271: Helicase conserved
           C-terminal domain
          Length = 412

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 38/82 (46%), Positives = 48/82 (58%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
           ALVLAPTRELAQQI++V    G    V+     GG   RE  R L+ GV +V+ TPGR+ 
Sbjct: 110 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVF 169

Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
           D L++ +         VLDEAD
Sbjct: 170 DMLKRQSLRADNIKMFVLDEAD 191



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
           ML  GF+ QI  I + + P  Q  ++SAT P E  ++    + +
Sbjct: 193 MLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSK 236


>At1g72730.1 68414.m08410 eukaryotic translation initiation factor
           4A, putative / eIF-4A, putative similar to Eukaryotic
           initiation factor 4A-10 GB:P41382 [Nicotiana tabacum];
           identical to (putative) RNA helicase GB:CAA09211
           [Arabidopsis thaliana] (Nucleic Acids Res. 27 (2),
           628-636 (1999))
          Length = 414

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 38/82 (46%), Positives = 47/82 (57%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
           ALVLAPTRELAQQI++V    G    V+     GG   RE  R L+ GV +V+ TPGR+ 
Sbjct: 112 ALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVF 171

Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
           D L + +         VLDEAD
Sbjct: 172 DLLRRQSLRADAIKMFVLDEAD 193


>At4g09730.1 68417.m01598 DEAD/DEAH box helicase, putative RNA
           helicase -Mus musculus,PIR2:I84741
          Length = 621

 Score = 71.7 bits (168), Expect = 4e-13
 Identities = 34/84 (40%), Positives = 50/84 (59%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
           P  +VL PTREL++Q+ +VA    H +  R+  V GG+  R Q   L   +++V+ TPGR
Sbjct: 190 PRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGR 249

Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
           ++  +E+G        YLVLDEAD
Sbjct: 250 ILQHIEEGNMVYGDIAYLVLDEAD 273



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAI 216
           S TGSGKTLAY+LP +
Sbjct: 156 SHTGSGKTLAYLLPIV 171


>At1g54270.1 68414.m06187 eukaryotic translation initiation factor
           4A-2 / eIF-4A-2 similar to eukaryotic translation
           initiation factor 4A GI:19696 from [Nicotiana
           plumbaginifolia]
          Length = 412

 Score = 70.5 bits (165), Expect = 9e-13
 Identities = 38/82 (46%), Positives = 47/82 (57%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
           ALVLAPTRELAQQI++V    G    V+     GG   RE  R L+ GV +V+ TPGR+ 
Sbjct: 110 ALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVF 169

Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
           D L + +         VLDEAD
Sbjct: 170 DMLRRQSLRPDCIKMFVLDEAD 191



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
           ML  GF+ QI  I + + P  Q  ++SAT P E  ++    + +
Sbjct: 193 MLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSK 236


>At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly
           identical to RNA helicase [Arabidopsis thaliana]
           GI:1488521; contains Pfam profiles PF00270: DEAD/DEAH
           box helicase, PF00271: Helicase conserved C-terminal
           domain
          Length = 671

 Score = 67.3 bits (157), Expect = 9e-12
 Identities = 34/84 (40%), Positives = 50/84 (59%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
           P  LVL PTRELA+Q+      +G +  + + C++GG     Q   L+RGV+IV+ TPGR
Sbjct: 175 PSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIVVGTPGR 234

Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
           + D +E+   +     + VLDEAD
Sbjct: 235 IKDHIERQNLDFSYLQFRVLDEAD 258



 Score = 31.1 bits (67), Expect = 0.69
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 166 RSQTGSGKTLAYILPAIVHINNQP 237
           R++TG GKTLA++LP +  + N P
Sbjct: 139 RARTGQGKTLAFVLPILESLVNGP 162



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 512 MLDMGFEPQIRKIIEQIRPDR--QTLMWSATWPKEVKKLAEGLL 637
           ML MGF   +  I+ ++      QTL++SAT P  VK ++   L
Sbjct: 260 MLRMGFVEDVELILGKVEDSTKVQTLLFSATLPSWVKNISNRFL 303


>At3g61240.2 68416.m06854 DEAD/DEAH box helicase, putative (RH12)
           identical to cDNA DEAD box RNA helicase, RH12 GI:3776000
          Length = 498

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 31/82 (37%), Positives = 46/82 (56%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
           A++L PTRELA Q  QV  +      ++     GG   R+    L + V +++ TPGR++
Sbjct: 195 AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRIL 254

Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
           D  +KG   L+ C  LV+DEAD
Sbjct: 255 DLTKKGVCVLKDCAMLVMDEAD 276



 Score = 34.3 bits (75), Expect = 0.074
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAK 190
           FE+      + +G+   G+++P+PIQ +  PIA++G +++  AK    K
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGK 174



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVK 616
           ++L   F+P + ++I+ +  +RQ LM+SAT+P  VK
Sbjct: 277 KLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVK 312


>At3g61240.1 68416.m06853 DEAD/DEAH box helicase, putative (RH12)
           identical to cDNA DEAD box RNA helicase, RH12 GI:3776000
          Length = 498

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 31/82 (37%), Positives = 46/82 (56%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
           A++L PTRELA Q  QV  +      ++     GG   R+    L + V +++ TPGR++
Sbjct: 195 AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRIL 254

Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
           D  +KG   L+ C  LV+DEAD
Sbjct: 255 DLTKKGVCVLKDCAMLVMDEAD 276



 Score = 34.3 bits (75), Expect = 0.074
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAK 190
           FE+      + +G+   G+++P+PIQ +  PIA++G +++  AK    K
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGK 174



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVK 616
           ++L   F+P + ++I+ +  +RQ LM+SAT+P  VK
Sbjct: 277 KLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVK 312


>At4g00660.2 68417.m00091 DEAD/DEAH box helicase, putative similar
           to ATP-dependent RNA helicases
          Length = 505

 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 30/82 (36%), Positives = 48/82 (58%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
           A+++ PTRELA Q  QV  + G    ++     GG   ++    L + V +++ TPGR++
Sbjct: 202 AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRIL 261

Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
           D  +KG   L+ C+ LV+DEAD
Sbjct: 262 DLTKKGVCVLKDCSVLVMDEAD 283



 Score = 34.7 bits (76), Expect = 0.056
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAK 190
           FE+      +  G+   G++ P+PIQ +  PIA++G++++  AK    K
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGK 181



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           ++L   F+P +  +I  +   RQ LM+SAT+P  VK   +  L
Sbjct: 284 KLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFL 326


>At4g00660.1 68417.m00090 DEAD/DEAH box helicase, putative similar
           to ATP-dependent RNA helicases
          Length = 505

 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 30/82 (36%), Positives = 48/82 (58%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
           A+++ PTRELA Q  QV  + G    ++     GG   ++    L + V +++ TPGR++
Sbjct: 202 AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRIL 261

Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
           D  +KG   L+ C+ LV+DEAD
Sbjct: 262 DLTKKGVCVLKDCSVLVMDEAD 283



 Score = 34.7 bits (76), Expect = 0.056
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAK 190
           FE+      +  G+   G++ P+PIQ +  PIA++G++++  AK    K
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGK 181



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           ++L   F+P +  +I  +   RQ LM+SAT+P  VK   +  L
Sbjct: 284 KLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFL 326


>At1g51380.1 68414.m05780 eukaryotic translation initiation factor
           4A, putative / eIF-4A, putative
          Length = 392

 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = +3

Query: 267 LVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
           LVL+P+RELA Q ++     G HT+   + C+ GG    E  + LERGV  V  TPGR+ 
Sbjct: 94  LVLSPSRELASQTEKTIQAIGAHTNIQAHACI-GGKSIGEDIKKLERGVHAVSGTPGRVY 152

Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
           D +++G+   +    LVLDE+D
Sbjct: 153 DMIKRGSLQTKAVKLLVLDESD 174



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 42/199 (21%), Positives = 76/199 (38%)
 Frame = +2

Query: 32  PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTSCQ 211
           PI+ F++    D V +GV   GYK+P+ IQ +     + G++++  A+    K   TS  
Sbjct: 20  PIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGK---TSMI 76

Query: 212 PLCT*TTNRLFGEVRSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASP 391
            +       +    +     L   + +++    +      H     H C+   S      
Sbjct: 77  AISVCQIVNISSR-KVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIK 135

Query: 392 GLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIRKIIEQIRPD 571
            L  G          +   + +G  Q  AV +        ML  G + QI  +   +  D
Sbjct: 136 KLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHD 195

Query: 572 RQTLMWSATWPKEVKKLAE 628
            Q  + SAT P+E+ ++ E
Sbjct: 196 IQVCLISATLPQEILEMTE 214


>At2g45810.1 68415.m05697 DEAD/DEAH box helicase, putative
          Length = 528

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 31/82 (37%), Positives = 45/82 (54%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
           A++L PTRELA Q  QV  +      +      GG   R+    L + V +++ TPGR++
Sbjct: 225 AVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLVGTPGRIL 284

Query: 444 DFLEKGTTNLQRCTYLVLDEAD 509
           D  +KG   L+ C  LV+DEAD
Sbjct: 285 DLAKKGVCVLKDCAMLVMDEAD 306



 Score = 35.9 bits (79), Expect = 0.024
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           ++L + F+P I ++I+ +   RQ LM+SAT+P  VK   +  L
Sbjct: 307 KLLSVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRYL 349



 Score = 34.3 bits (75), Expect = 0.074
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAK 190
           FE+      + +G+   G+++P+PIQ +  PIA++G +++  AK    K
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGK 204


>At1g77050.1 68414.m08971 DEAD/DEAH box helicase, putative similar
           to RNA helicase GI:3776027 from [Arabidopsis thaliana]
          Length = 513

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = +3

Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
           G  AL+L+PTR+LA+Q  +   + G  + +R + + GG    +Q  +L +G +++IATPG
Sbjct: 98  GVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPG 157

Query: 435 RLIDFL-EKGTTNLQRCTYLVLDEAD 509
           RL+  L E     L+   Y+V DEAD
Sbjct: 158 RLMHLLSEVDDMTLRTVEYVVFDEAD 183



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           FE  N    V   +K  GYK PTPIQ +  P+ +SG ++V +A+
Sbjct: 30  FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMAR 73



 Score = 37.5 bits (83), Expect = 0.008
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +2

Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
           +  MGF  Q+ +I+ Q+  +RQTL++SAT P  + + A+  L E
Sbjct: 185 LFGMGFAEQLHQILTQLSENRQTLLFSATLPSALAEFAKAGLRE 228



 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHINNQPPIRRGEVRLL 267
           ++TGSGKT A+++P +  +    P  +G VR L
Sbjct: 72  ARTGSGKTAAFLIPMLEKLKQHVP--QGGVRAL 102


>At3g19760.1 68416.m02501 eukaryotic translation initiation factor
           4A, putative / eIF-4A, putative / DEAD box RNA helicase,
           putative contains DEAD/DEAH helicase domain; similar to
           RNA helicase GB:CAA09195 from [Arabidopsis thaliana];
           identical to cDNA DEAD box RNA helicase, RH2 GI:3775984
          Length = 408

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 440
           AL+L+PTRELA Q ++     G H +   + C+ GG    E  R LE GV +V  TPGR+
Sbjct: 106 ALILSPTRELATQTEKTIQAIGLHANIQAHACI-GGNSVGEDIRKLEHGVHVVSGTPGRV 164

Query: 441 IDFLEKGTTNLQRCTYLVLDEAD 509
            D +++ +   +    L+LDE+D
Sbjct: 165 CDMIKRRSLRTRAIKLLILDESD 187



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 43/213 (20%), Positives = 82/213 (38%)
 Frame = +2

Query: 5   TVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVP 184
           T  G+E   PI  F +    + V +GV   G+++P+ IQ +     + G++++  A+   
Sbjct: 27  TTDGIE---PITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGT 83

Query: 185 AKRWPTSCQPLCT*TTNRLFGEVRSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVW 364
            K    +   +C    +    EV++    L   + ++T    +      H     H C+ 
Sbjct: 84  GKTSMIALS-VCQ-VVDTSSREVQA--LILSPTRELATQTEKTIQAIGLHANIQAHACIG 139

Query: 365 WCS*KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*RMLDMGFEPQIR 544
             S       L  G          +   + +   +  A+ +        ML  GF+ QI 
Sbjct: 140 GNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIY 199

Query: 545 KIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGE 643
            +   + PD Q  + SAT P E+ ++    + E
Sbjct: 200 DVYRYLPPDLQVCLVSATLPHEILEMTSKFMTE 232


>At4g16630.1 68417.m02514 DEAD/DEAH box helicase, putative (RH28)
           identical to cDNA DEAD box RNA helicase, RH28 GI:3776026
          Length = 789

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +3

Query: 267 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 446
           L+L PTRELA QI  +  +    + ++   + GG   REQ   L    +IV+ATPGR+ID
Sbjct: 242 LILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMID 301

Query: 447 FLEKG-TTNLQRCTYLVLDEAD 509
            L    + +L     L+LDEAD
Sbjct: 302 HLRNSMSVDLDDLAVLILDEAD 323



 Score = 44.0 bits (99), Expect = 9e-05
 Identities = 23/56 (41%), Positives = 33/56 (58%)
 Frame = +2

Query: 5   TVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 172
           TV GV  H     F E N    + +  +T+GYK+PTPIQA   P+A++G++L   A
Sbjct: 158 TVDGVSFH--ADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASA 211



 Score = 34.3 bits (75), Expect = 0.074
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
           R+L  GF  +I +++      RQT+++SAT  +EVK+L +
Sbjct: 324 RLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVK 363


>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
           Pfam profiles  PF00270:DEAD/DEAH box helicase and
           PF00271:  Helicase conserved C-terminal domain;
           identical to cDNA RH27 helicase, partial GI:4033334
          Length = 633

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
 Frame = +3

Query: 240 YSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC--VFGGAPKREQARDLERGVE 413
           ++ R G   LV+ PTRELA Q   VA +     Y   T   V GG  ++ +A  L +GV 
Sbjct: 221 FTPRNGTGVLVICPTRELAIQSYGVAKEL--LKYHSQTVGKVIGGEKRKTEAEILAKGVN 278

Query: 414 IVIATPGRLIDFLEKGTTNL-QRCTYLVLDEAD 509
           +++ATPGRL+D LE     + +   +LV+DEAD
Sbjct: 279 LLVATPGRLLDHLENTNGFIFKNLKFLVMDEAD 311



 Score = 34.7 bits (76), Expect = 0.056
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           FE  +  D   + +K MG+   T IQA+  P  M G++++G A+
Sbjct: 156 FESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAAR 199



 Score = 32.7 bits (71), Expect = 0.23
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
           R+L+  FE  ++KI+  +   RQT ++SAT   +V+ LA
Sbjct: 312 RILEQNFEEDLKKILNLLPKTRQTSLFSATQSAKVEDLA 350



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 85  KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAI 216
           K+ G  R     +  +    + ++    ++TGSGKTLA+++PA+
Sbjct: 170 KEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAV 213


>At3g18600.1 68416.m02364 DEAD/DEAH box helicase, putative
           non-consensus acceptor splice site AT at exon 2; similar
           to DEAD box helicase protein GB:NP_006764 from [Homo
           sapiens], contains Pfam profile: PF00270  DEAD/DEAH box
           helicase
          Length = 568

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = +3

Query: 240 YSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 419
           +S R G   +V+ PTRELA Q + VA +         + V GG  +R +A+ +  G  +V
Sbjct: 156 FSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIASGSNLV 215

Query: 420 IATPGRLIDFLEKGTTNL-QRCTYLVLDEAD 509
           IATPGRL+D L+     + +    LV+DEAD
Sbjct: 216 IATPGRLLDHLQNTKAFIYKHLKCLVIDEAD 246



 Score = 33.1 bits (72), Expect = 0.17
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 625
           R+L+  FE  + KI++ +   RQT ++SAT   +VK LA
Sbjct: 247 RILEENFEEDMNKILKILPKTRQTALFSATQTSKVKDLA 285



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 85  KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAI 216
           K+ G Q      +  +      K+    ++TGSGKTLA+++PA+
Sbjct: 105 KEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAV 148



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           F+  +  +     +K MG++  T IQA      + GK+++G A+
Sbjct: 91  FDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAAR 134


>At3g06980.1 68416.m00829 DEAD/DEAH box helicase, putative contains
           Pfam profile: PF00270 DEAD/DEAH box helicase
          Length = 781

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSY-VRNTCVFGGAPKREQARDLERGVEIVIATPG 434
           P  +VL PT ELA Q+         +    R+  V GG  +R Q  +LE+GV+++IATPG
Sbjct: 452 PRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGVDVLIATPG 511

Query: 435 RLIDFLEKGTTNLQRCTYLVLDEADV 512
           R    + +G   L      +LDE D+
Sbjct: 512 RFTYLMNEGILGLSNLRCAILDEVDI 537



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 172 QTGSGKTLAYILPAIVHINNQ 234
           Q+GSGKTLAY++P I  +  +
Sbjct: 419 QSGSGKTLAYLVPVIQRLREE 439


>At5g60990.1 68418.m07651 DEAD/DEAH box helicase, putative (RH10)
           probable replication protein A1, Oryza sativa,
           EMBL:AF009179
          Length = 456

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
           A VL+PTRELA QI +     G    +R   + GG  + +Q   L +   +++ATPGRL 
Sbjct: 92  ACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLW 151

Query: 444 DFLE--KGTTNLQRCTYLVLDEADVCWIWDLNHKSEKSLSK 560
           D +   KG  +L+   YLVLDEAD      LN   EKSL++
Sbjct: 152 DHMSDTKG-FSLKSLKYLVLDEADRL----LNEDFEKSLNQ 187



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 15/52 (28%), Positives = 32/52 (61%)
 Frame = +2

Query: 20  EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           E +  ++ F E    + + +  + +G+K P+ IQA+  P A+ GK+++G+A+
Sbjct: 3   EENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQ 54


>At2g40700.1 68415.m05021 DEAD/DEAH box helicase, putative (RH17)
           identical to GB:CAA09207, contains a DEAD/DEAH box
           family ATP-dependent helicas signature; identical to
           cDNA DEAD box RNA helicase, RH17 GI:3776008
          Length = 609

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
 Frame = +3

Query: 255 GPIALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLERGVEIVIATP 431
           G  ALV+ PTREL  Q+ +      H   ++    V GG  K ++   L +G+ I+IATP
Sbjct: 104 GTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATP 163

Query: 432 GRLIDFLEKGTTNLQR-CTYLVLDEAD 509
           GRL+D L+   + + +   +++ DEAD
Sbjct: 164 GRLLDHLKNTASFVHKNLRWVIFDEAD 190



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 175 TGSGKTLAYILPAIVHINNQPP 240
           TG+GKT+AY+ P I H+    P
Sbjct: 76  TGTGKTIAYLAPLIHHLQGHSP 97



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +2

Query: 92  MGYKEPTPIQAQGWPIAMSGKNLV 163
           MG++ PT +QAQ  P+ +SG++++
Sbjct: 48  MGFEAPTLVQAQAIPVILSGRDVL 71


>At3g16840.1 68416.m02150 DEAD/DEAH box helicase, putative (RH13)
           similar to RNA helicase GB:CAA09204 from [Arabidopsis
           thaliana]; identical to cDNA DEAD box RNA helicase, RH13
           GI:3776002
          Length = 832

 Score = 57.2 bits (132), Expect = 9e-09
 Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 443
           AL++ PTRELA Q+ +   +      V+   + GG    +Q R L+   EIV+ATPGRL 
Sbjct: 282 ALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLW 341

Query: 444 DFL---EKGTTNLQRCTYLVLDEAD 509
           + +   EK    L   ++ VLDEAD
Sbjct: 342 ELMSAGEKHLVELHSLSFFVLDEAD 366



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +1

Query: 139 SYVWKEFSWRSQTGSGKTLAYILPAI 216
           +Y  K+    ++TGSGKTLA+ LP +
Sbjct: 225 AYQGKDVIGAAETGSGKTLAFGLPIL 250


>At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18) 
          Length = 593

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 IALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLER-GVEIVIATPG 434
           + ++++PTREL+ QI  VA  F  T + V +  + GG   +   + +E  G  ++I TPG
Sbjct: 92  MGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPG 151

Query: 435 RLIDFLEK-GTTNLQRCTYLVLDEAD 509
           RL D +E+    + +    L+LDEAD
Sbjct: 152 RLSDIMERMEILDFRNLEILILDEAD 177



 Score = 35.5 bits (78), Expect = 0.032
 Identities = 16/40 (40%), Positives = 29/40 (72%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
           R+L+MGF+ Q+  II ++   R+T ++SAT  + V++LA+
Sbjct: 178 RLLEMGFQRQVNYIISRLPKQRRTGLFSATQTEGVEELAK 217



 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +1

Query: 148 WKEFSWRSQTGSGKTLAYILPAI 216
           +K+ +  + TGSGKTLA+++P +
Sbjct: 53  YKDVAVDAATGSGKTLAFVVPLV 75


>At1g16280.1 68414.m01949 DEAD/DEAH box helicase, putative similar
           to gb|L13612 DEAD-box protein (dbp45A) from Drosophila
           melanogaster and is a member of PF|00270 DEAD/DEAH box
           helicase family
          Length = 491

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 34/88 (38%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
 Frame = +3

Query: 255 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 434
           G  ALV+ PTRELA Q+ +     G    +R + + GG     Q   L     IVI TPG
Sbjct: 126 GVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPG 185

Query: 435 RLIDFLEKG---TTNLQRCTYLVLDEAD 509
           R+   LE          R  +LVLDEAD
Sbjct: 186 RIKVLLENNPDVPPVFSRTKFLVLDEAD 213



 Score = 37.1 bits (82), Expect = 0.010
 Identities = 16/40 (40%), Positives = 27/40 (67%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
           R+LD+GF+ ++R I + +   RQTL++SAT    ++ L E
Sbjct: 214 RVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLE 253



 Score = 33.1 bits (72), Expect = 0.17
 Identities = 12/44 (27%), Positives = 27/44 (61%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           FE     ++  +  K +G ++PTP+Q    P  ++G++++G+A+
Sbjct: 60  FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQ 103



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 82  CKDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQP 237
           CK+ G+++     +  +      ++    +QTGSGKT A+ LP +  +   P
Sbjct: 73  CKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDP 124


>At1g71370.1 68414.m08239 DEAD/DEAH box helicase, putative similar
           to ATP-dependent RNA helicase GB:6321111 from (S.
           cerevisiae)
          Length = 558

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 IALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDL-ERGVEIVIATPG 434
           + ++++PTREL+ QI +VA  F  T   V +  + GG         L E G  ++I TPG
Sbjct: 92  MGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLLIGTPG 151

Query: 435 RLIDFLEK-GTTNLQRCTYLVLDEAD 509
           RL D +++    + +    L+LDEAD
Sbjct: 152 RLSDMMKRMEFLDFRNLEILILDEAD 177



 Score = 36.3 bits (80), Expect = 0.018
 Identities = 17/40 (42%), Positives = 27/40 (67%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
           R+LDMGF+ Q+  II ++   R+T ++SAT  + V  LA+
Sbjct: 178 RLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAK 217



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
 Frame = +1

Query: 175 TGSGKTLAYILPAIVHI---NNQPP 240
           TGSGKTLA++LP I  I   N+ PP
Sbjct: 62  TGSGKTLAFLLPFIEIIRRSNSYPP 86


>At1g12770.1 68414.m01482 DEAD/DEAH box helicase family protein /
           pentatricopeptide (PPR) repeat-containing protein
           contains Pfam profiles:  PF00271 helicase conserved
           C-terminal domain, PF01535 PPR repeat, PF00270:
           DEAD/DEAH box helicase
          Length = 1145

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = +3

Query: 264 ALVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE-IVIATPGR 437
           A+++AP+REL  QI ++V    G         + GGA +  Q   L++    IV+ TPGR
Sbjct: 194 AMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQEEALKKNKPAIVVGTPGR 253

Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
           + +  + G  +   C +LVLDE D
Sbjct: 254 IAEISKGGKLHTHGCRFLVLDEVD 277



 Score = 30.7 bits (66), Expect = 0.91
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +1

Query: 166 RSQTGSGKTLAYILPAIVHI 225
           +S TGSGKTLAY+LP +  I
Sbjct: 153 QSYTGSGKTLAYLLPILSEI 172



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 163
           FEE   PD +   ++  G+  PT +Q+   P  + G + V
Sbjct: 112 FEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAV 151


>At5g63630.1 68418.m07989 DEAD box RNA helicase, putative strong
           similarity to RNA helicase RH25 [Arabidopsis thaliana]
           GI:3776023; contains Pfam profiles PF00270: DEAD/DEAH
           box helicase, PF00271: Helicase conserved C-terminal
           domain; identical to cDNA DEAD box RNA helicase, RH31
           GI:3776030
          Length = 522

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
 Frame = +3

Query: 231 PTAYSER*GPI-ALVLAPTRELAQQIQQVAADF--GHTSYVRNTCVFGGAPKREQARDLE 401
           PT+   +  PI ALV+ PTRELA Q    A      H S      + G     EQ R   
Sbjct: 121 PTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQT 180

Query: 402 RGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEAD 509
              +I++ATPGRL D +E      T L+    LVLDEAD
Sbjct: 181 NPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEAD 219



 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 17/37 (45%), Positives = 27/37 (72%)
 Frame = +2

Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 622
           +LDMGF   I +II  +  +RQT ++SAT P+EV+++
Sbjct: 221 LLDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQI 257



 Score = 32.7 bits (71), Expect = 0.23
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +1

Query: 85  KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPP 240
           KD G +       + L      K+   +++TG+GKT+A++LP+I  +   PP
Sbjct: 70  KDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPP 121


>At1g63250.1 68414.m07150 DEAD box RNA helicase, putative similar to
           RNA helicase (RH25) [Arabidopsis thaliana] GI:3776023;
           contains Pfam profiles PF00270: DEAD/DEAH box helicase,
           PF00271: Helicase conserved C-terminal domain
          Length = 798

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
 Frame = +3

Query: 264 ALVLAPTRELAQQI--QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
           AL+L PTRELA QI  +  A    H      T + G   K +Q R      +I+IATPGR
Sbjct: 408 ALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGR 467

Query: 438 LIDFLEKG---TTNLQRCTYLVLDEADV 512
           L+D +E     T+ L      ++DEAD+
Sbjct: 468 LLDHIENKSGLTSRLMALKLFIVDEADL 495



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 18/42 (42%), Positives = 32/42 (76%)
 Frame = +2

Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           +LD+GF   + KII+ +   RQ+L++SAT PKEV+++++ +L
Sbjct: 496 LLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVL 537



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/42 (28%), Positives = 27/42 (64%)
 Frame = +1

Query: 91  NGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAI 216
           +G+ +      + L++    K+   +++TG+GK++A++LPAI
Sbjct: 346 SGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAI 387


>At2g07750.1 68415.m01003 DEAD box RNA helicase, putative similar to
           RNA helicase RH25 [Arabidopsis thaliana] GI:3776023;
           contains Pfam profiles PF00270: DEAD/DEAH box helicase,
           PF00271: Helicase conserved C-terminal domain
          Length = 845

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
 Frame = +3

Query: 267 LVLAPTRELAQQI--QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 440
           L+L PTRELA QI  +  A    H      T + G   + +Q R      +I+IATPGRL
Sbjct: 456 LILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQRLESEPCQILIATPGRL 515

Query: 441 IDFLEKG---TTNLQRCTYLVLDEADVCWIWDLNHKSE 545
           +D +E     T+ L      ++DEAD+  + DL  K +
Sbjct: 516 LDHIENKSGLTSRLMALKLFIVDEADL--LLDLGFKRD 551



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 18/42 (42%), Positives = 33/42 (78%)
 Frame = +2

Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLL 637
           +LD+GF+  + KII+ +   RQ+L++SAT PKEV+++++ +L
Sbjct: 543 LLDLGFKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVL 584



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/42 (28%), Positives = 27/42 (64%)
 Frame = +1

Query: 91  NGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAI 216
           +G+ +      + L++    K+   +++TG+GK++A++LPAI
Sbjct: 393 SGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAI 434


>At5g08610.1 68418.m01024 DEAD box RNA helicase (RH26) strong
           similarity to RNA helicase RH26 [Arabidopsis thaliana]
           GI:3776025; contains Pfam profiles PF00270: DEAD/DEAH
           box helicase, PF00271: Helicase conserved C-terminal
           domain; identical to cDNA DEAD box RNA helicase, RH26
           GI:3776024
          Length = 850

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 38/99 (38%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
 Frame = +3

Query: 231 PTAYSER*GPI-ALVLAPTRELAQQIQQVAADF--GHTSYVRNTCVFGGAPKREQARDLE 401
           P +   R  PI  LV+ PTRELA Q    A      H S      + G     EQ R   
Sbjct: 449 PASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQT 508

Query: 402 RGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEAD 509
              +I++ATPGRL D +E  +   T L     LVLDEAD
Sbjct: 509 NPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEAD 547



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = +2

Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 622
           +LDMGF   I +II  +   RQT ++SAT P+EV+++
Sbjct: 549 LLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQI 585



 Score = 35.9 bits (79), Expect = 0.024
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +1

Query: 85  KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRR 249
           KD G +       + L      K+   +++TG+GKT+A++LPAI  +   PP  R
Sbjct: 398 KDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASR 452


>At5g08620.1 68418.m01025 DEAD box RNA helicase (RH25) identical to
           RNA helicase [Arabidopsis thaliana] GI:3776023; contains
           Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
           Helicase conserved C-terminal domain
          Length = 563

 Score = 44.0 bits (99), Expect = 9e-05
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
 Frame = +3

Query: 231 PTAYSER*GPI-ALVLAPTRELA-QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 404
           P +   R  PI  LV+ PTRELA Q   +      +   +    V GG     + R L++
Sbjct: 147 PASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQK 206

Query: 405 G-VEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEAD 509
              +I++ATPGRL D ++  +   T L     LVLDEAD
Sbjct: 207 SPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEAD 245



 Score = 36.7 bits (81), Expect = 0.014
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = +2

Query: 512 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 622
           +LDMGF  +I +II  +   RQT ++SAT   EV+++
Sbjct: 247 LLDMGFRREIERIIAAVPKQRQTFLFSATVSDEVRQI 283



 Score = 33.1 bits (72), Expect = 0.17
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 151 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRR 249
           K+   +++TG+GKT+A++LP+I  +   PP  R
Sbjct: 118 KDILAKAKTGTGKTVAFLLPSIEAVIKAPPASR 150



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           F++        +G++  G+K  T +Q    P+ + GK+++  AK
Sbjct: 82  FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAK 125


>At3g09720.1 68416.m01151 DEAD/DEAH box helicase, putative similar
           to RNA helicase involved in rRNA processing GB:6321267
           from [Saccharomyces cerevisiae]c, ontains DEAD and DEAH
           box domain
          Length = 541

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
 Frame = +2

Query: 2   VTVSGVEVHNPIQYFEEANF----PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 169
           + VSG  +  P++ F E +       Y+ + +  +G+KEPTPIQ Q  PI +SG+     
Sbjct: 125 IHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFAC 184

Query: 170 AKRVPAKRWPTSCQPL 217
           A     K +   C  L
Sbjct: 185 APTGSGKTFAFICPML 200



 Score = 32.7 bits (71), Expect = 0.23
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADF--GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 437
           A++L+P RELA Q  +       G   ++R        P  + A   +   +++I+TP R
Sbjct: 213 AVILSPARELAAQTAREGKKLIKGSNFHIRLMT----KPLVKTADFSKLWCDVLISTPMR 268

Query: 438 LIDFLEKGTTNLQRCTYLVLDEAD 509
           L   ++    +L +  YLVLDE+D
Sbjct: 269 LKRAIKAKKIDLSKVEYLVLDESD 292


>At5g54910.1 68418.m06839 DEAD/DEAH box helicase, putative 
          Length = 739

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 22/51 (43%), Positives = 32/51 (62%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEGLLGETTFRSI 661
           R+LD  F+ Q+  II Q+   RQTL++SAT  K+VK LA   L +  + S+
Sbjct: 229 RVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVKDLARLSLRDPEYISV 279



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
 Frame = +3

Query: 240 YSER*GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 419
           +S   G   ++++PTRELA Q   V    G         + GG    +  ++    + I+
Sbjct: 138 WSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEMNIL 197

Query: 420 IATPGRLIDFLEKGTTNLQ--RCTYLVLDEAD 509
           +  PGRL+  +++ T N +  +   L+LDEAD
Sbjct: 198 VCAPGRLLQHMDE-TPNFECPQLQILILDEAD 228



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +1

Query: 106 TDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQ 234
           TD  S++ +  +   ++    ++TGSGKTLA+++P +  ++ +
Sbjct: 95  TDVQSAA-IPHALCGRDILGAARTGSGKTLAFVIPILEKLHRE 136


>At4g15850.1 68417.m02410 DEAD/DEAH box helicase, putative similar
           to D-E-A-D box protein [Drosophila melanogaster]
           GI:499204; contains Pfam profiles PF00270: DEAD/DEAH box
           helicase, PF00271: Helicase conserved C-terminal domain
          Length = 512

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
 Frame = +3

Query: 387 ARDLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEAD 509
           +++LE  V+I++ATPGRL+D +   KG T L+   YLV+DE D
Sbjct: 159 SQNLESAVDILVATPGRLMDHINNTKGFT-LEHLRYLVVDETD 200



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHINNQPPIR 246
           S TGSGKTL+Y LP IV +    P+R
Sbjct: 69  SPTGSGKTLSYALP-IVQLLASRPVR 93


>At5g11200.1 68418.m01309 DEAD/DEAH box helicase, putative
          Length = 427

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNT--CVFGGAPKREQARDLERGV--EIVIATP 431
           ALVL  TRELA QI      F  ++Y+ +T   VF G    +  +DL +     IV+ TP
Sbjct: 117 ALVLCHTRELAYQICNEFVRF--STYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTP 174

Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
           GR++    +   +L+   + +LDE D
Sbjct: 175 GRVLALAREKDLSLKNVRHFILDECD 200


>At5g11170.2 68418.m01306 DEAD/DEAH box helicase, putative (RH15)
           DEAD BOX RNA helicase RH15, Arabidopsis thaliana,
           EMBL:ATH010466
          Length = 344

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNT--CVFGGAPKREQARDLERGV--EIVIATP 431
           ALVL  TRELA QI      F  ++Y+ +T   VF G    +  +DL +     IV+ TP
Sbjct: 34  ALVLCHTRELAYQICNEFVRF--STYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTP 91

Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
           GR++    +   +L+   + +LDE D
Sbjct: 92  GRVLALAREKDLSLKNVRHFILDECD 117


>At5g11170.1 68418.m01305 DEAD/DEAH box helicase, putative (RH15)
           DEAD BOX RNA helicase RH15, Arabidopsis thaliana,
           EMBL:ATH010466
          Length = 427

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSYVRNT--CVFGGAPKREQARDLERGV--EIVIATP 431
           ALVL  TRELA QI      F  ++Y+ +T   VF G    +  +DL +     IV+ TP
Sbjct: 117 ALVLCHTRELAYQICNEFVRF--STYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTP 174

Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
           GR++    +   +L+   + +LDE D
Sbjct: 175 GRVLALAREKDLSLKNVRHFILDECD 200


>At3g53110.1 68416.m05853 DEAD/DEAH box helicase, putative RNA
           helicase, Mus musculus, PIR:I49731
          Length = 496

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA--RDLERGVEIVIATP 431
           P AL + PTRELA Q  +V    G  + +        + +   A  R       +VI TP
Sbjct: 163 PQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAATRGAPVSAHVVIGTP 222

Query: 432 GRLIDFLEKGTTNLQRCTYLVLDEAD 509
           G L  ++      L     LV DEAD
Sbjct: 223 GTLKKWMAFKRLGLNHLKILVFDEAD 248


>At1g71280.1 68414.m08226 DEAD/DEAH box helicase, putative contains
           Pfam profile: PF00270 DEAD/DEAH box helicase
          Length = 465

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +3

Query: 261 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 440
           + ++++PTREL+ QI +VA       + +   V       E     E G  ++I TPGRL
Sbjct: 93  MGVIISPTRELSAQIHKVARAV-RLDFAKCREVEADMNTLE-----EEGANLLIGTPGRL 146

Query: 441 IDFLEK-GTTNLQRCTYLVLDEAD 509
            D +++    + +    L+LDEAD
Sbjct: 147 SDMMKRMEFLDFRNLEILILDEAD 170



 Score = 36.3 bits (80), Expect = 0.018
 Identities = 17/40 (42%), Positives = 27/40 (67%)
 Frame = +2

Query: 509 RMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 628
           R+LDMGF+ Q+  II ++   R+T ++SAT  + V  LA+
Sbjct: 171 RLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAK 210



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
 Frame = +1

Query: 175 TGSGKTLAYILPAIVHI---NNQPP 240
           TGSGKTLA++LP I  I   N+ PP
Sbjct: 63  TGSGKTLAFLLPFIEIIRRSNSYPP 87


>At2g28600.1 68415.m03476 expressed protein 
          Length = 502

 Score = 35.1 bits (77), Expect = 0.042
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER-GVEIVIATPG 434
           P  L L P++  A Q++ V         +    +  GAP   Q   L+    E ++ATP 
Sbjct: 197 PFLLYLVPSQSKASQVRSVCKALKGIG-IHTVSLHQGAPLDHQISGLKSVEPEFIVATPE 255

Query: 435 RLIDFLEKGTTNLQRCTYLVLDE 503
           RL++ +     ++   + LV+DE
Sbjct: 256 RLLEIVTLKGVDISNVSLLVIDE 278


>At5g19210.2 68418.m02287 DEAD/DEAH box helicase, putative
           EUKARYOTIC INITIATION FACTOR 4A-II (EIF-4A-II), Homo
           sapiens, SWISSPROT:IF42_HUMAN
          Length = 472

 Score = 34.7 bits (76), Expect = 0.056
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
 Frame = +3

Query: 264 ALVLAPTRELAQQIQQVAADFGHTSY--VRNTCVF----GGAPKREQARDLERGVEIVIA 425
           A+++ PTREL  Q+ +VA      S   V+   V     GG  +R ++        I++A
Sbjct: 147 AVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVA 206

Query: 426 TPGRLIDFLEKGTTNLQRCTYLVLDEAD 509
           T   L   LEK    +     LV+DE D
Sbjct: 207 TVASLCHMLEKHIFRIDSVRVLVVDEVD 234



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 169 SQTGSGKTLAYILPAIVHINNQ 234
           +QTGSGKTL Y+L     IN Q
Sbjct: 120 AQTGSGKTLTYLLLIFSLINPQ 141


>At4g34910.1 68417.m04950 DEAD/DEAH box helicase, putative (RH16)
           identical to cDNA DEAD box RNA helicase, RH16 GI:3776006
          Length = 626

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +1

Query: 151 KEFSWRSQTGSGKTLAYILPAI 216
           K+   R++TGSGKTLAY+LP +
Sbjct: 84  KDVVARAKTGSGKTLAYLLPLL 105



 Score = 30.7 bits (66), Expect = 0.91
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
 Frame = +3

Query: 258 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCV-FGGAPKREQARDLERGV-EIVIATP 431
           P A +L P+REL QQ+    +       V+   V    +      R+   G+ EI+++TP
Sbjct: 121 PSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMRNALAGLPEILVSTP 180

Query: 432 GRLIDFLEKG----TTNLQRCTYLVLDEADV 512
             +      G    T   +  + LVLDEAD+
Sbjct: 181 ACIPKCFAAGVLEPTAVSESLSILVLDEADL 211



 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 44  FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 175
           FEE      + + +   G ++PT IQ    P  + GK++V  AK
Sbjct: 48  FEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAK 91


>At1g09010.1 68414.m01005 glycoside hydrolase family 2 protein low
           similarity to mannosidase [gi:5359712] from Cellulomonas
           fimi
          Length = 944

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +2

Query: 20  EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQA----QGWPIAMSGKNLVGVAKRVPA 187
           E+  P  +F++  +       V ++G      I+A    +GW I +  K L G  K VP 
Sbjct: 529 EIQYPEDFFKDTYYKYGFNPEVGSVGMPVAETIRATMPPEGWTIPLFKKGLDGFIKEVPN 588

Query: 188 KRW 196
           + W
Sbjct: 589 RMW 591


>At1g59990.1 68414.m06758 DEAD/DEAH box helicase, putative (RH22)
           similar to RNA helicase GI:3776015 from [Arabidopsis
           thaliana]; contains Pfam profiles PF00271: Helicase
           conserved C-terminal domain, PF00270: DEAD/DEAH box
           helicase; matches EST OAO811-2
          Length = 581

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 85  KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINN 231
           +D+G  R     +  +      K+    ++TGSGKT  Y+ P I  + N
Sbjct: 96  RDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIIDQLTN 144


>At4g21390.1 68417.m03090 S-locus lectin protein kinase family
           protein contains Pfam profiles: PF00954 S-locus
           glycoprotein family, PF00069 protein kinase domain,
           PF01453 lectin (probable mannose binding)
          Length = 849

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 19/80 (23%), Positives = 33/80 (41%)
 Frame = -3

Query: 616 LHFFGPSS*PHQSLSVWAYLLNDFSDLWFKSHIQHTSASSRTKYVHRCKLVVPFSKKSIN 437
           L FF P S  H+ L +W   + D + +W  +     S  S    +     +V    K+I 
Sbjct: 53  LGFFSPGSSTHRFLGIWYGNIEDKAVVWVANRATPISDQSGVLMISNDGNLVLLDGKNIT 112

Query: 436 LPGVAMTISTPLSKSRACSL 377
           +    +  ST  + +R  S+
Sbjct: 113 VWSSNIESSTTNNNNRVVSI 132


>At1g11920.1 68414.m01376 pectate lyase family protein similar to
           pectate lyase GI:14289169 from [Salix gilgiana]
          Length = 384

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 121 SSRLADSYVWKEFSWRSQTGSGKTLAYILPA 213
           + R+   Y WK + WR+     K  AY +P+
Sbjct: 313 TKRIDSGYDWKRWKWRTSKDVFKNGAYFVPS 343


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,808,619
Number of Sequences: 28952
Number of extensions: 350753
Number of successful extensions: 1190
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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