Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0816
(453 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 101 5e-21
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 101 7e-21
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 99 4e-20
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 94 1e-18
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 90 2e-17
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 89 4e-17
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 77 2e-13
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 75 7e-13
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 74 2e-12
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 72 7e-12
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 7e-12
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 69 4e-11
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 68 8e-11
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 67 2e-10
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 66 3e-10
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 66 3e-10
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 66 3e-10
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 66 4e-10
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 65 6e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 65 6e-10
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 8e-10
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 65 8e-10
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 64 1e-09
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 64 1e-09
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 64 1e-09
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 64 1e-09
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 64 2e-09
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 64 2e-09
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 64 2e-09
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 64 2e-09
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 63 2e-09
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 63 2e-09
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 63 3e-09
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 63 3e-09
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 62 4e-09
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 62 4e-09
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 62 5e-09
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 62 7e-09
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 62 7e-09
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 7e-09
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 62 7e-09
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 62 7e-09
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 61 9e-09
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 61 9e-09
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 61 9e-09
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 61 9e-09
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 61 9e-09
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 61 9e-09
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 61 9e-09
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 61 9e-09
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 61 1e-08
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 60 2e-08
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 60 2e-08
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 60 2e-08
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 2e-08
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 60 2e-08
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 60 2e-08
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 60 2e-08
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 60 2e-08
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 60 2e-08
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 60 2e-08
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 60 2e-08
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 60 2e-08
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 60 3e-08
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 60 3e-08
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 60 3e-08
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 60 3e-08
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 59 4e-08
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 59 4e-08
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 59 5e-08
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 59 5e-08
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 59 5e-08
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 59 5e-08
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 59 5e-08
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 59 5e-08
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 59 5e-08
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 59 5e-08
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 58 7e-08
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 58 7e-08
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 58 7e-08
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 58 9e-08
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 58 9e-08
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 58 9e-08
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 58 9e-08
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 58 1e-07
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 58 1e-07
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 58 1e-07
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 58 1e-07
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 57 2e-07
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 57 2e-07
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 57 2e-07
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 57 2e-07
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 57 2e-07
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 57 2e-07
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 57 2e-07
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 57 2e-07
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 57 2e-07
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 57 2e-07
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 57 2e-07
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 57 2e-07
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 57 2e-07
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 57 2e-07
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 57 2e-07
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 57 2e-07
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 57 2e-07
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 56 3e-07
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 56 3e-07
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 56 3e-07
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 56 3e-07
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 56 3e-07
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 56 3e-07
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 3e-07
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 56 3e-07
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 56 4e-07
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 56 4e-07
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 56 4e-07
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 56 4e-07
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 56 4e-07
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 5e-07
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 56 5e-07
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 56 5e-07
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 56 5e-07
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 56 5e-07
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 56 5e-07
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 55 6e-07
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 55 6e-07
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 55 6e-07
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 55 6e-07
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 55 6e-07
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 55 6e-07
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 55 8e-07
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 55 8e-07
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 55 8e-07
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 55 8e-07
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 55 8e-07
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 55 8e-07
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 55 8e-07
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 54 1e-06
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 1e-06
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 54 1e-06
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 1e-06
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 54 1e-06
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 54 1e-06
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 54 1e-06
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 54 1e-06
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 54 1e-06
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 54 1e-06
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 54 1e-06
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 54 1e-06
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 54 1e-06
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 54 1e-06
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 1e-06
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 54 1e-06
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 54 1e-06
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 54 1e-06
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 54 1e-06
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 54 1e-06
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 54 1e-06
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 54 2e-06
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 54 2e-06
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 54 2e-06
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 54 2e-06
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 54 2e-06
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 54 2e-06
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 54 2e-06
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 54 2e-06
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 54 2e-06
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 53 3e-06
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 53 3e-06
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 53 3e-06
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 53 3e-06
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 53 3e-06
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 53 3e-06
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 53 3e-06
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 53 3e-06
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 53 3e-06
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 53 3e-06
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 53 3e-06
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 53 3e-06
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 53 3e-06
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 53 3e-06
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 53 3e-06
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 53 3e-06
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 53 3e-06
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 53 3e-06
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 53 3e-06
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 53 3e-06
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 53 3e-06
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 53 3e-06
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 53 3e-06
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 53 3e-06
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 53 3e-06
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 53 3e-06
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 53 3e-06
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 52 4e-06
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 52 4e-06
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 52 4e-06
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 4e-06
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 52 4e-06
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 52 4e-06
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 52 4e-06
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 52 4e-06
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 52 4e-06
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 52 4e-06
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 52 6e-06
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 52 6e-06
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 52 6e-06
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 52 6e-06
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 52 6e-06
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 52 6e-06
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 52 6e-06
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 52 6e-06
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 52 6e-06
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 52 6e-06
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 52 6e-06
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 8e-06
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 52 8e-06
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 52 8e-06
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 52 8e-06
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 52 8e-06
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 52 8e-06
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 52 8e-06
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 51 1e-05
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 51 1e-05
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 51 1e-05
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 51 1e-05
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 51 1e-05
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 51 1e-05
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 51 1e-05
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 51 1e-05
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 51 1e-05
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 51 1e-05
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 51 1e-05
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 51 1e-05
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 51 1e-05
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 51 1e-05
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 51 1e-05
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 51 1e-05
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 50 2e-05
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 50 2e-05
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 50 2e-05
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 50 2e-05
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 50 2e-05
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 2e-05
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 50 2e-05
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 50 2e-05
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 50 2e-05
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 50 2e-05
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 50 2e-05
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 50 2e-05
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 50 2e-05
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 50 2e-05
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 50 2e-05
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 50 2e-05
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 50 3e-05
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 50 3e-05
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 3e-05
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 50 3e-05
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 50 3e-05
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 50 3e-05
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 50 3e-05
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 50 3e-05
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 50 3e-05
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 50 3e-05
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 50 3e-05
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 50 3e-05
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 50 3e-05
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 49 4e-05
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 49 4e-05
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 49 4e-05
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 49 4e-05
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 49 4e-05
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 49 4e-05
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 49 4e-05
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 49 4e-05
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 49 4e-05
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 49 4e-05
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 49 4e-05
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 49 4e-05
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 49 4e-05
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 49 4e-05
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 49 4e-05
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 49 5e-05
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 49 5e-05
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 49 5e-05
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 49 5e-05
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 49 5e-05
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 49 5e-05
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 49 5e-05
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 49 5e-05
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 49 5e-05
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 49 5e-05
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 48 7e-05
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 48 7e-05
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 48 7e-05
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 48 7e-05
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 48 7e-05
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 48 7e-05
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 48 7e-05
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 48 7e-05
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 48 7e-05
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 48 7e-05
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 48 7e-05
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 48 7e-05
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 48 7e-05
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 48 7e-05
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 48 9e-05
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 48 9e-05
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 48 9e-05
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 48 9e-05
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 48 9e-05
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 48 9e-05
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 48 9e-05
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 48 9e-05
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 48 9e-05
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 48 9e-05
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 48 9e-05
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 48 9e-05
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 48 9e-05
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 48 9e-05
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 48 1e-04
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 48 1e-04
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 48 1e-04
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 48 1e-04
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 48 1e-04
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 48 1e-04
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 48 1e-04
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 48 1e-04
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 48 1e-04
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 48 1e-04
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 48 1e-04
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 47 2e-04
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 47 2e-04
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 47 2e-04
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 47 2e-04
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 47 2e-04
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 47 2e-04
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 47 2e-04
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 47 2e-04
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 47 2e-04
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 47 2e-04
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 47 2e-04
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 47 2e-04
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 47 2e-04
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 47 2e-04
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 47 2e-04
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 47 2e-04
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 47 2e-04
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 47 2e-04
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 47 2e-04
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 47 2e-04
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 47 2e-04
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 47 2e-04
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 47 2e-04
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 47 2e-04
UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1; F... 47 2e-04
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 47 2e-04
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 3e-04
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 3e-04
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 46 3e-04
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 46 3e-04
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 46 3e-04
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 46 3e-04
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 46 3e-04
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 46 3e-04
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 46 3e-04
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 46 3e-04
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 46 4e-04
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 46 4e-04
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 46 4e-04
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 46 4e-04
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 46 4e-04
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 46 4e-04
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 46 4e-04
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 46 4e-04
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 46 4e-04
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 46 4e-04
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 46 4e-04
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 46 4e-04
UniRef50_Q4P559 Cluster: Putative uncharacterized protein; n=1; ... 46 4e-04
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 46 4e-04
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 46 4e-04
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 46 5e-04
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 5e-04
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 46 5e-04
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 46 5e-04
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 46 5e-04
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 46 5e-04
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 46 5e-04
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 46 5e-04
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 46 5e-04
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 45 7e-04
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 45 7e-04
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 45 7e-04
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 45 7e-04
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 45 7e-04
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 45 7e-04
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 45 7e-04
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 45 7e-04
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 45 7e-04
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 45 7e-04
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 45 7e-04
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 45 7e-04
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 45 7e-04
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 45 7e-04
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 45 7e-04
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 45 9e-04
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 45 9e-04
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 45 9e-04
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 45 9e-04
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 45 9e-04
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 45 9e-04
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 45 9e-04
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 45 9e-04
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 45 9e-04
UniRef50_Q9NUL7 Cluster: Probable ATP-dependent RNA helicase DDX... 45 9e-04
UniRef50_UPI0000E4A052 Cluster: PREDICTED: similar to DEAD/H box... 44 0.001
UniRef50_UPI0000D574D5 Cluster: PREDICTED: similar to Probable A... 44 0.001
UniRef50_Q08BL1 Cluster: Zgc:153386; n=2; Danio rerio|Rep: Zgc:1... 44 0.001
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 44 0.001
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 44 0.001
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 44 0.001
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 44 0.001
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.001
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 44 0.001
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 44 0.001
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 44 0.001
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 44 0.001
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 44 0.001
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.001
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 44 0.001
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 44 0.001
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 44 0.001
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 44 0.001
UniRef50_P15424 Cluster: ATP-dependent RNA helicase MSS116, mito... 44 0.001
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 44 0.001
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 44 0.001
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 44 0.001
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 44 0.002
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 44 0.002
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 44 0.002
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 44 0.002
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 44 0.002
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.002
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 44 0.002
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 44 0.002
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 44 0.002
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 44 0.002
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 44 0.002
UniRef50_Q4P0Y5 Cluster: ATP-dependent RNA helicase DBP7; n=1; U... 44 0.002
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 44 0.002
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 44 0.002
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 44 0.002
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 44 0.002
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 44 0.002
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 44 0.002
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.002
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 44 0.002
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 44 0.002
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 44 0.002
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 43 0.003
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 43 0.003
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 43 0.003
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 43 0.003
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 43 0.003
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 43 0.003
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.003
UniRef50_Q4Q5M6 Cluster: ATP-dependent RNA helicase-like protein... 43 0.003
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 43 0.003
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 43 0.003
UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11; ... 43 0.003
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 43 0.003
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 43 0.003
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 43 0.003
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 43 0.003
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 43 0.003
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 43 0.003
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 43 0.004
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 43 0.004
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 43 0.004
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 43 0.004
UniRef50_Q00GM9 Cluster: Plastid RNA helicase VDL protein; n=1; ... 43 0.004
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 43 0.004
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 43 0.004
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 43 0.004
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 43 0.004
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 43 0.004
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 43 0.004
UniRef50_Q6C2D3 Cluster: Yarrowia lipolytica chromosome F of str... 43 0.004
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 43 0.004
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 43 0.004
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 43 0.004
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 43 0.004
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 101 bits (243), Expect = 5e-21
Identities = 47/66 (71%), Positives = 57/66 (86%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
++G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTR LAQQIQKV++ALGD
Sbjct: 68 IKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDY 127
Query: 434 LNAKCH 451
+ A CH
Sbjct: 128 MGATCH 133
Score = 97.1 bits (231), Expect = 2e-19
Identities = 44/68 (64%), Positives = 55/68 (80%), Gaps = 2/68 (2%)
Frame = +3
Query: 63 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 236
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 237 RAIMPCSK 260
RAI+PC K
Sbjct: 62 RAIIPCIK 69
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 101 bits (242), Expect = 7e-21
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
+++GRDVIAQ+QSGTGKTATFSIS+LQ +D +RE QALILAPTR LA QIQK ++ALGD
Sbjct: 72 IIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGD 131
Query: 431 XLNAKCH 451
+N +CH
Sbjct: 132 YMNVQCH 138
Score = 61.3 bits (142), Expect = 9e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3
Query: 144 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAI 69
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 99.1 bits (236), Expect = 4e-20
Identities = 43/57 (75%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Frame = +3
Query: 93 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCSK 260
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+PC K
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIK 66
Score = 82.2 bits (194), Expect = 5e-15
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKV 412
++G DVIAQAQSGTGKTATF ISILQ+IDTS++E QALILAPTR LAQQ K+
Sbjct: 65 IKGHDVIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 93.9 bits (223), Expect = 1e-18
Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = +3
Query: 72 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 248
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 249 PCSK 260
PC K
Sbjct: 68 PCIK 71
Score = 74.9 bits (176), Expect = 7e-13
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQ 400
++G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTR LAQQ
Sbjct: 70 IKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 89.8 bits (213), Expect = 2e-17
Identities = 43/65 (66%), Positives = 52/65 (80%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXL 436
+G DVI QAQSGTGKTATF ILQQ++ + +CQAL+LAPTR LAQQI+KV+ ALGD L
Sbjct: 48 KGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQALVLAPTRELAQQIEKVMRALGDHL 107
Query: 437 NAKCH 451
N K +
Sbjct: 108 NVKIY 112
Score = 32.3 bits (70), Expect = 5.0
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 162 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCSK 260
D N+ L + G EKPSAIQQ+ I+P K
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCK 48
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 89.0 bits (211), Expect = 4e-17
Identities = 39/67 (58%), Positives = 54/67 (80%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
++QG DVIAQAQSGTGKT+ F++++ Q +DTS RE QALI +PTR LA Q +KV++A+GD
Sbjct: 310 IIQGHDVIAQAQSGTGKTSMFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGD 369
Query: 431 XLNAKCH 451
+N + H
Sbjct: 370 SVNIQAH 376
Score = 60.1 bits (139), Expect = 2e-08
Identities = 24/41 (58%), Positives = 34/41 (82%)
Frame = +3
Query: 129 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLP 309
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 76.6 bits (180), Expect = 2e-13
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQ-IQKVVIALG 427
+++G+D IAQAQSGTGKTATFSI+ LQ IDTS QALILAPTR LAQQ I ++ LG
Sbjct: 68 IIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALILAPTRELAQQTITRIFFILG 127
Score = 31.5 bits (68), Expect = 8.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 189 RGIYAYGFEKPSAIQQRAIMPCSK 260
+ + +YGFEKPS IQQ I+P K
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIK 70
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 74.9 bits (176), Expect = 7e-13
Identities = 36/63 (57%), Positives = 47/63 (74%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
++ G+DV+AQAQSGTGKT TF+I LQ+ID + R+ Q +ILAP R LA+QI VV +G
Sbjct: 90 IILGKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQ 149
Query: 431 XLN 439
LN
Sbjct: 150 YLN 152
Score = 63.3 bits (147), Expect = 2e-09
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +3
Query: 123 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKP 89
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 73.7 bits (173), Expect = 2e-12
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIA 421
++G DVIAQ+QSGTGKTAT+ I+ LQ+ID + QA+ILAPTR LA QIQKVV++
Sbjct: 56 IKGFDVIAQSQSGTGKTATYVIAALQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
Score = 61.7 bits (143), Expect = 7e-09
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +3
Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCSK 260
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+PC K
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIK 57
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 71.7 bits (168), Expect = 7e-12
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
LL+GRDVI QAQ+GTGKTA F + +LQ+ID + R QAL+L PTR LA Q+ + AL
Sbjct: 39 LLEGRDVIGQAQTGTGKTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAK 98
Query: 431 XL 436
L
Sbjct: 99 HL 100
Score = 37.1 bits (82), Expect = 0.18
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
VE+F D+ L+EELL+ I GF +PS IQ AI
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAI 36
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 71.7 bits (168), Expect = 7e-12
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
ALL+GRDV+ QAQ+GTGKTA F++ +L ++D RE Q L+LAPTR LAQQ+ + G
Sbjct: 42 ALLEGRDVLGQAQTGTGKTAAFALPLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYG 101
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 69.3 bits (162), Expect = 4e-11
Identities = 32/59 (54%), Positives = 42/59 (71%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
LL+GRDV+ AQ+GTGKTA F++ IL ID +R QAL+L PTR LAQQ+ + + G
Sbjct: 43 LLEGRDVVGLAQTGTGKTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYG 101
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 68.1 bits (159), Expect = 8e-11
Identities = 30/59 (50%), Positives = 44/59 (74%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
LL G+DV+ +AQ+GTGKTA F + L +IDTSI++ Q ++LAPTR LA Q+ + + + G
Sbjct: 49 LLAGKDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFG 107
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 66.9 bits (156), Expect = 2e-10
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
ALLQG+DVI QAQ+GTGKTA F + I++++ R QAL+L PTR LA Q+ + + +G
Sbjct: 39 ALLQGKDVIGQAQTGTGKTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIG 98
Query: 428 DXLNAK 445
K
Sbjct: 99 RHARVK 104
Score = 33.5 bits (73), Expect = 2.2
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
TF D+ L E++L+ + GFE+PS IQ +AI
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAI 37
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 66.5 bits (155), Expect = 3e-10
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXL 436
R VIAQAQSGTGKT FSI +L +ID S + QAL+LAPTR LA QI V +G +
Sbjct: 131 RHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRI 188
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 87 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAI 122
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 66.1 bits (154), Expect = 3e-10
Identities = 31/59 (52%), Positives = 46/59 (77%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
+LQG+D+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+ PTR LA QI + ++ LG
Sbjct: 79 ILQGKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEEILKLG 136
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 66.1 bits (154), Expect = 3e-10
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +2
Query: 251 LLQG-RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
L++G RD++ QAQ+GTGKTA F I IL+ ID S R QALILAPTR LA Q+ + +
Sbjct: 36 LIEGKRDIVGQAQTGTGKTAAFGIPILETIDESSRNTQALILAPTRELAIQVAEEI 91
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 65.7 bits (153), Expect = 4e-10
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
+G+D+I QAQ+GTGKTA F+I IL +D SI Q L++APTR LA QI + LG
Sbjct: 37 EGKDIIGQAQTGTGKTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQLNILG 93
Score = 35.5 bits (78), Expect = 0.54
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251
F MN+K E+L+ + GFEKP+ IQ+ A++P
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQE-AVLP 33
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 65.3 bits (152), Expect = 6e-10
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
+LQGRD IA AQ+GTGKTA F++ ILQ + I QALILAPTR LA Q+
Sbjct: 40 ILQGRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPTRELAIQV 90
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 65.3 bits (152), Expect = 6e-10
Identities = 29/52 (55%), Positives = 40/52 (76%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
A+L G+DV QA++G+GKTA F + +LQQID S+ + QAL+L PTR LA Q+
Sbjct: 36 AILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQV 87
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 64.9 bits (151), Expect = 8e-10
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
LL+G+DV+ AQ+GTGKTA F++ +L + +RE Q L+LAPTR LAQQ+ V
Sbjct: 40 LLEGKDVLGLAQTGTGKTAAFTLPLLARTQNEVREPQVLVLAPTRELAQQVAMAV 94
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 64.9 bits (151), Expect = 8e-10
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
L GRD++A+A++GTGKTA+F I L +I+TS+ QALIL PTR LA Q +V LG
Sbjct: 71 LTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLG 128
Score = 45.2 bits (102), Expect = 7e-04
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +3
Query: 81 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAI 67
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 64.1 bits (149), Expect = 1e-09
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
LL G D+I QAQ+GTGKTA F + +L ID S + QAL+LAPTR LAQQ+
Sbjct: 89 LLAGSDLIGQAQTGTGKTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQV 139
Score = 33.5 bits (73), Expect = 2.2
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
+F D NLK +L+ + GF +P+ IQ++AI
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAI 86
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 64.1 bits (149), Expect = 1e-09
Identities = 27/56 (48%), Positives = 42/56 (75%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
ALL+G+DV+ +AQ+GTGKTA F + L +ID S+++ Q L++ PTR LA Q+ + +
Sbjct: 41 ALLEGQDVLGEAQTGTGKTAAFGLPALAKIDASVKQTQVLVVTPTRELAIQVAEAL 96
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 64.1 bits (149), Expect = 1e-09
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
+L+G DVIAQA +G+GKTA F + +LQ++D ++ QAL+L PTR LA Q+ K
Sbjct: 60 ILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGK 112
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 64.1 bits (149), Expect = 1e-09
Identities = 30/61 (49%), Positives = 43/61 (70%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXL 436
Q +++IAQ+QSGTGKTATF +++L +ID + CQ L +APTR L QI +V I + +
Sbjct: 86 QPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFM 145
Query: 437 N 439
N
Sbjct: 146 N 146
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +3
Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
V++F+D+ LK ELL GI + GF KPS+IQ+RA+
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERAL 79
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 63.7 bits (148), Expect = 2e-09
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
LL GRDV+ Q+Q+GTGKTA FS+ IL+++D + QA++L PTR LA Q+
Sbjct: 37 LLSGRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQAIVLTPTRELAIQV 87
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 63.7 bits (148), Expect = 2e-09
Identities = 28/54 (51%), Positives = 42/54 (77%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
A L+GRD+I Q+Q+GTGKT +F + I+Q ++ ++E QA+I+APTR LA QI +
Sbjct: 35 AALKGRDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPTRELAWQIHE 88
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 63.7 bits (148), Expect = 2e-09
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
LQGRD+IA A++G+GKTA F + ILQ++ + ALILAPTR L QI + ++A+G
Sbjct: 86 LQGRDIIALAETGSGKTAAFGLPILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGT 145
Query: 434 L 436
L
Sbjct: 146 L 146
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
LQG+D+I QAQ+GTGKTA F + +L ++DT Q +++APTR LA Q+ + + +G
Sbjct: 37 LQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIG 94
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 63.3 bits (147), Expect = 2e-09
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
+ GRD++A+A++GTGKTA F I L+++ + + QALI+ PTR LA Q +VV LG
Sbjct: 81 ITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKH 140
Query: 434 LNAKC 448
C
Sbjct: 141 CGISC 145
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
TF+D LK ELL GI+ GFEKPS IQ+ AI
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAI 77
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 63.3 bits (147), Expect = 2e-09
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
LL GRDV+ AQ+G+GKTA FS+ +LQ +D ++ Q L+LAPTR LA Q+ + +
Sbjct: 40 LLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAM 94
Score = 31.5 bits (68), Expect = 8.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
TF D+ LK +L + G+EKPS IQ I
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECI 37
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 62.9 bits (146), Expect = 3e-09
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
+L G D+I QAQ+GTGKTA F++ +L +ID + RE Q LILAPTR LA Q+
Sbjct: 57 ILAGHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQLLILAPTRELALQV 107
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 62.9 bits (146), Expect = 3e-09
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
LQG+D++ A++G+GKTA F+I ILQ + T+ + AL+LAPTR LA QI++ ALG
Sbjct: 133 LQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIKETFDALGSS 192
Query: 434 LNAK 445
+ +
Sbjct: 193 MGLR 196
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 62.5 bits (145), Expect = 4e-09
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
G D+I +A+SGTGKTA F I L+ ID I Q +ILAPTR +A QI++V+ +LG
Sbjct: 61 GFDLIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLG 116
Score = 34.3 bits (75), Expect = 1.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
TF M L +++L G+ GF KPS IQ ++I
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI 55
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 62.5 bits (145), Expect = 4e-09
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
+L+GRD+IA A++G+GKTA+F+I IL Q+ A+IL PTR LA QI + A+G
Sbjct: 38 ILKGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGA 97
Query: 431 XLNAKC 448
+N C
Sbjct: 98 PMNVNC 103
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 62.1 bits (144), Expect = 5e-09
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
L+ +DVI Q+ +G+GKT + + I Q+IDTS RE QA+ILAPT LA QI K +
Sbjct: 38 LENKDVIGQSPTGSGKTLAYLLPIFQKIDTSKREMQAIILAPTHELAMQINKEI 91
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 61.7 bits (143), Expect = 7e-09
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDT--SIRECQALILAPTRXLAQQI 403
L G+DVI QA++GTGKTA FSI IL+Q+D+ R+ QA+++ PTR LA Q+
Sbjct: 79 LNGKDVIGQARTGTGKTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQV 130
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 61.7 bits (143), Expect = 7e-09
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIAL 424
L+ +D+I Q+Q+G+GKT + + I Q+ID+S RE QALILAPT L QI K + L
Sbjct: 38 LKNKDIIGQSQTGSGKTLAYLLPIFQKIDSSKRETQALILAPTHELVMQIDKQIKTL 94
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 61.7 bits (143), Expect = 7e-09
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
LL G DV+ AQ+GTGKTA FS+ +L +IDT+ + QAL+L PTR LA Q+
Sbjct: 39 LLDGNDVLGLAQTGTGKTAAFSLPLLSRIDTTKNKPQALVLCPTRELAIQV 89
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 61.7 bits (143), Expect = 7e-09
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKV 412
+++IAQ+QSGTGKTATF +++L +I T + CQ L +APTR LA QI+ V
Sbjct: 116 QNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMAPTRELALQIESV 165
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +3
Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCSKD 263
V TF ++NLKE LL+GI A GF KPS IQ+RA+ D
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISD 113
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 61.7 bits (143), Expect = 7e-09
Identities = 27/55 (49%), Positives = 44/55 (80%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
R++I Q+QSGTGKTA F++++L ++D +I QA+ +AP+R LA+QIQ+V+ +G
Sbjct: 188 RNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIG 242
Score = 44.0 bits (99), Expect = 0.002
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +3
Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
V++F ++NL E+L++GI A GF+KPS IQ++A+
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKAL 179
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 61.3 bits (142), Expect = 9e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3
Query: 144 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAI 69
Score = 52.0 bits (119), Expect = 6e-06
Identities = 22/30 (73%), Positives = 29/30 (96%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQID 340
+++GRDVIAQ+QSGTGKTATFS+S+LQ +D
Sbjct: 72 IIKGRDVIAQSQSGTGKTATFSVSVLQCLD 101
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 61.3 bits (142), Expect = 9e-09
Identities = 28/62 (45%), Positives = 44/62 (70%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
LL+GRD + +AQ+GTGKTA FS+ +L +++ S + QA+++APTR LA Q+ + LG
Sbjct: 60 LLEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQ 119
Query: 431 XL 436
+
Sbjct: 120 NI 121
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 61.3 bits (142), Expect = 9e-09
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
L+ G+D+ QAQ+GTGKTA F I ++ +D SI + Q+LIL PTR LA Q+
Sbjct: 35 LMTGKDLTGQAQTGTGKTAAFGIPAIEHVDISINQTQSLILCPTRELALQV 85
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 61.3 bits (142), Expect = 9e-09
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
LL RDV+ QAQ+GTGKTA+F++ IL +ID QAL+LAPTR LA Q+
Sbjct: 41 LLNNRDVLGQAQTGTGKTASFALPILARIDIKQTTPQALVLAPTRELAIQV 91
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 61.3 bits (142), Expect = 9e-09
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
L Q D+I QAQ+GTGKTA F + I+Q+I+ +++ QALIL PTR LA Q+ + +
Sbjct: 37 LSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCPTRELAIQVNEEI 91
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 61.3 bits (142), Expect = 9e-09
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-ECQALILAPTRXLAQQIQKVVIALG 427
L GRDVI AQ+GTGKTA F + ILQ++ R +A+I+ PTR LA+QIQ V+ ALG
Sbjct: 36 LDGRDVIGIAQTGTGKTAAFVLPILQRLMRGPRGRVRAMIVTPTRELAEQIQGVIEALG 94
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 61.3 bits (142), Expect = 9e-09
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
L+QGRDV+ Q TGKT S+S+L D S+++ Q LIL TR L ++ +++ALG
Sbjct: 56 LIQGRDVVIQNFRSTGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGK 115
Query: 431 XLNAKCH 451
LN H
Sbjct: 116 FLNVSIH 122
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/70 (32%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +3
Query: 144 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC--SKDAML-SLKPSQELEKLLLS 314
+ TF+ M L++ELLRGI A+GF +P +QQRA++P +D ++ + + + + + LS
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 315 LYRFYNKSIQ 344
+ ++ S++
Sbjct: 80 VLSIFDLSVK 89
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 61.3 bits (142), Expect = 9e-09
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
LQ +DVI QAQ+GTGKTA F I I+++++ QAL++APTR LA Q+ + + +G
Sbjct: 37 LQNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKIG 94
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
L +DVI QAQ+GTGKTA F I ++++I+ QA+++APTR LA Q+ + + +G
Sbjct: 38 LSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQD 97
Query: 434 LNAK 445
AK
Sbjct: 98 KRAK 101
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 60.5 bits (140), Expect = 2e-08
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRXLAQQIQKVVIAL 424
A+LQGRDV+ AQ+GTGKTA +++ +LQQ+ + + +ALIL+PTR LA QI +
Sbjct: 46 AILQGRDVVGLAQTGTGKTAAYALPLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHF 105
Query: 425 GDXLNAKC 448
G + +C
Sbjct: 106 GRQTHLRC 113
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 60.5 bits (140), Expect = 2e-08
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +2
Query: 272 IAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKV 412
I+ + SGTG TATF+ISILQQID ++ +A LAPTR LAQQIQKV
Sbjct: 182 ISCSPSGTGNTATFAISILQQIDLDLKATKASGLAPTRVLAQQIQKV 228
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
A+L G DVI QAQ+GTGKTA F I +++++ T R QALIL PTR LA Q+
Sbjct: 39 AILAGGDVIGQAQTGTGKTAAFGIPVVEKVSTG-RHVQALILTPTRELAIQV 89
Score = 32.3 bits (70), Expect = 5.0
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+++ + EE+ + I GFE+PS IQ +AI
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAI 37
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 60.5 bits (140), Expect = 2e-08
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
+L G+D+I QA++GTGKT F + IL++ID + QALI+APTR LA QI
Sbjct: 39 ILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTRELALQI 89
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 60.5 bits (140), Expect = 2e-08
Identities = 25/51 (49%), Positives = 40/51 (78%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
L+ GRD++ QAQ+GTGKTA F++ +L+++++ + Q L+LAPTR LA Q+
Sbjct: 105 LMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQV 155
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
D I AQ+GTGKTA F + +L ID + RE QALILAPTR LAQQI
Sbjct: 53 DFIGLAQTGTGKTAAFGLPLLDLIDVNSREVQALILAPTRELAQQI 98
Score = 31.9 bits (69), Expect = 6.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
++ F+ + L + LL G+ GFE P+ IQQ++I
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSI 44
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 60.5 bits (140), Expect = 2e-08
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
LL +D+I QAQ+GTGKTA F + +L +I+ +I Q LILAPTR LA Q+ + V
Sbjct: 46 LLNNKDIIGQAQTGTGKTAAFVLPLLDKINLNINAPQLLILAPTRELAIQVSEAV 100
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 60.1 bits (139), Expect = 2e-08
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
LL G+D+I QA++G+GKTA FS+ IL +I+ QALIL PTR LA Q+ + LG
Sbjct: 81 LLAGKDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGR 140
Query: 431 XL 436
L
Sbjct: 141 RL 142
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 60.1 bits (139), Expect = 2e-08
Identities = 25/51 (49%), Positives = 39/51 (76%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
LL G D++ +AQ+GTGKTA F++ +L ++D +++ Q L+LAPTR LA Q+
Sbjct: 78 LLAGHDLLGEAQTGTGKTAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQV 128
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 60.1 bits (139), Expect = 2e-08
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
+L+G D++ A++GTGKT F+I ILQ++ ALIL PTR LA QI + ALG
Sbjct: 123 ILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGK 182
Query: 431 XLNAKC 448
+ KC
Sbjct: 183 PITLKC 188
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 60.1 bits (139), Expect = 2e-08
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQ 400
+L G+DV QAQ+GTGKTA F I I++++D + QAL+L+PTR LA Q
Sbjct: 39 ILDGKDVTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVLSPTRELAIQ 88
Score = 31.9 bits (69), Expect = 6.6
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 150 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
+TF + + EELL+ I GFE+P+ IQ AI
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAI 36
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 60.1 bits (139), Expect = 2e-08
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
LQ RDVI AQ+G+GKTA F+I ILQ + + + A +LAPTR LA QI + V ALG
Sbjct: 139 LQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQVEALGST 198
Query: 434 LNAK 445
+ +
Sbjct: 199 IGVR 202
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 59.7 bits (138), Expect = 3e-08
Identities = 25/49 (51%), Positives = 37/49 (75%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
++V+ AQ+GTGKTA F + +LQQI+ S+++ Q L+L PTR L QQ+ K
Sbjct: 40 KNVVGVAQTGTGKTAAFGLPVLQQINPSLQQTQVLVLVPTRELGQQVAK 88
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 59.7 bits (138), Expect = 3e-08
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
A+L G+D+IAQA++GTGKTA F + +L ++ Q LIL PTR L +Q+ K +
Sbjct: 37 AILDGKDLIAQAKTGTGKTAAFGLGVLSKLVLDDYRIQVLILCPTRELCEQVSKAI 92
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 59.7 bits (138), Expect = 3e-08
Identities = 31/67 (46%), Positives = 40/67 (59%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
L G D+I Q+ GT T T ILQ++D + ECQAL+L PT LA + Q V+ LG
Sbjct: 82 LCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQ 139
Query: 431 XLNAKCH 451
L+AK H
Sbjct: 140 FLSAKAH 146
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 59.7 bits (138), Expect = 3e-08
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
AL+ G DV+ AQ+GTGKTA F+I +L +ID + + QAL+L PTR LA Q+ + G
Sbjct: 46 ALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYG 105
Query: 428 DXLN 439
L+
Sbjct: 106 AYLS 109
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 59.3 bits (137), Expect = 4e-08
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
+D+I QA+SGTGKT FS+ L+ ID + Q LILAPTR +A QIQ + A+G
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIG 58
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 59.3 bits (137), Expect = 4e-08
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
+++G DVI QAQ+GTGKT F I I+++I+ I++ Q+LIL PTR L Q+
Sbjct: 37 IIKGHDVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQV 87
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 58.8 bits (136), Expect = 5e-08
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 6/57 (10%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRXLAQQI 403
LLQGRDV+A AQ+GTGKTA + + ++Q + +T+ + +ALILAPTR LAQQ+
Sbjct: 37 LLQGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQV 93
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 58.8 bits (136), Expect = 5e-08
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +2
Query: 251 LLQG-RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
LL G D I A +GTGKTA F I +++ ID+++++ QAL+L+PTR LA Q+ + + LG
Sbjct: 78 LLAGANDFIGLASTGTGKTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLG 137
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 58.8 bits (136), Expect = 5e-08
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
++Q +D++ +Q+GTGKT + + I ++IDTS RE QALILAPT L QI V
Sbjct: 36 IIQNKDLLINSQTGTGKTLAYLLPIFEKIDTSKRETQALILAPTHELVMQITNQV 90
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 58.8 bits (136), Expect = 5e-08
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
+LQG+D + +A++GTGKTA F+I LQ + ++ Q LIL P R L +QI + I LG
Sbjct: 39 ILQGQDALVRAKTGTGKTAAFAIPALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGK 98
Query: 431 XL 436
L
Sbjct: 99 GL 100
Score = 33.9 bits (74), Expect = 1.6
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRA--IMPCSKDAMLSLK 281
F D+ LK+ +L IY G++KP+ IQ ++ I+ +DA++ K
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAK 50
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 58.8 bits (136), Expect = 5e-08
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
L + RD++A AQ+GTGKTA F +LQ ID S + Q LI+APTR L QI
Sbjct: 36 LAEDRDMVALAQTGTGKTAAFGFPLLQNIDASSKTTQGLIIAPTRELCLQI 86
Score = 33.9 bits (74), Expect = 1.6
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
TFD + L LL+ I GFE PS IQ+ AI
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAI 32
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 58.8 bits (136), Expect = 5e-08
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
ALL G ++ AQ+GTGKTA F++ +L +ID ++ E Q L+LAPTR LA Q+
Sbjct: 57 ALLAGNHLLGVAQTGTGKTAAFALPLLSRIDANVAEPQILVLAPTRELAIQV 108
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 58.8 bits (136), Expect = 5e-08
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
LL G DV+ AQ+G+GKTA F++ +L QID S + Q L++APTR LA Q+
Sbjct: 39 LLNGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQV 89
Score = 33.9 bits (74), Expect = 1.6
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
TF+D+ L E +L+ + GFE PS IQQ I
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCI 36
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 58.8 bits (136), Expect = 5e-08
Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRXLAQQIQKVVIALG 427
R++IAQ+QSGTGKT F ++IL ++D + QAL LAP+R LA+QIQ V+ ++G
Sbjct: 136 RNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIG 191
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 58.4 bits (135), Expect = 7e-08
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTS--IRECQALILAPTRXLAQQIQKVVIALG 427
L+G D+I QAQ+GTGKTA F +I+ D S + +ALILAPTR LA Q+ + ++ LG
Sbjct: 39 LEGHDIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLG 98
Score = 37.9 bits (84), Expect = 0.10
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
FDD+ LKE LL+ I GFE+PS IQ +I
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESI 35
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 58.4 bits (135), Expect = 7e-08
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
LL+ RDV+ AQ+GTGKTA F + +L +D R QAL+LAPTR LA Q + +
Sbjct: 79 LLELRDVVGIAQTGTGKTAAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAI 133
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 58.4 bits (135), Expect = 7e-08
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLNAK 445
++IAQA++G+GKTATF++++L +++ ++ QAL + PTR LA Q +V+ LG K
Sbjct: 139 NIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFTQIK 198
Query: 446 C 448
C
Sbjct: 199 C 199
>UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1,; n=2;
Theria|Rep: PREDICTED: similar to eukaryotic translation
initiation factor 4A, isoform 1, - Monodelphis domestica
Length = 59
Score = 58.0 bits (134), Expect = 9e-08
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +3
Query: 117 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEK 218
G +++DW+++V++FDDMNL E LL GIYAYGFEK
Sbjct: 10 GVIESDWNEIVDSFDDMNLSESLLCGIYAYGFEK 43
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 58.0 bits (134), Expect = 9e-08
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
L GRD++A+A++GTGK+ + I +L++ID QAL+L PTR LA Q+ ++ I +
Sbjct: 124 LSGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKH 183
Query: 434 L 436
L
Sbjct: 184 L 184
Score = 38.3 bits (85), Expect = 0.076
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+D LK ELL GI+ G+EKPS IQ+ +I
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESI 120
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 58.0 bits (134), Expect = 9e-08
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPTRXLAQQIQKVVIAL 424
L+GRDV+ QA++GTGKTA F I I+++++ + R QALIL PTR LA Q++ + L
Sbjct: 39 LEGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQALILTPTRELAVQVRDEIAKL 97
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 58.0 bits (134), Expect = 9e-08
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
L G+D+I A++G+GKTA F+I ILQ++ + +LILAPTR L+ QI++ +I+LG
Sbjct: 76 LSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSE 135
Query: 434 L 436
+
Sbjct: 136 I 136
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 57.6 bits (133), Expect = 1e-07
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
+ DV+A AQ+GTGKTA F + +LQQID R Q+LIL PTR L QI
Sbjct: 39 ENNDVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCPTRELCLQI 87
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 57.6 bits (133), Expect = 1e-07
Identities = 26/60 (43%), Positives = 43/60 (71%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
A+L+ +D+I ++Q+G+GKTA F+I I Q +D + QAL+L PTR LA Q+++ + +G
Sbjct: 37 AILEHKDIIVKSQTGSGKTAAFAIPICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIG 96
Score = 31.9 bits (69), Expect = 6.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 144 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
+ F D L +ELL+ I FE P+ +QQ+ I
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVI 35
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +2
Query: 251 LLQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
LL G++ VI QAQ+GTGKTA F I +++++D + QAL+L PTR LA Q+
Sbjct: 36 LLSGKNNVIGQAQTGTGKTAAFGIPLIERLDEKANDVQALVLTPTRELALQV 87
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
+L+G DV+A A++G+GKTA F I ILQ + T ++ ALI+ PTR LA QI
Sbjct: 35 ILEGNDVVACAKTGSGKTAAFLIPILQSLMTELKPLYALIITPTRELAHQI 85
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
L G DV+ +AQ+GTGKTA F+I +L+ ++ R QALI+ PTR L Q+ + + +G
Sbjct: 39 LDGMDVVGEAQTGTGKTAAFAIPVLENLEAE-RVPQALIICPTRELCLQVSEEIKRIGKY 97
Query: 434 LNAK 445
+ K
Sbjct: 98 MKVK 101
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 57.6 bits (133), Expect = 1e-07
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
L+G D+I AQ+G+GKTA F+I IL ++ A ILAPTR LAQQI++ +LG
Sbjct: 116 LEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSL 175
Query: 434 LNAK 445
+ +
Sbjct: 176 MGVR 179
Score = 35.1 bits (77), Expect = 0.71
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 126 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPP 114
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
A+L G+DV A A +G+GKT + + +L+++ TS E QAL+L PTR LA Q+ +V+ +G
Sbjct: 55 AMLTGKDVFALANTGSGKTLAYGLPLLERLKTS-PEQQALVLVPTRELAMQVSEVLTHVG 113
Query: 428 DXL 436
L
Sbjct: 114 TAL 116
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
+L+G++VI +A++GTGKT + + I+++ID S E QA+IL+PT L QI V+ L
Sbjct: 36 ILKGKNVIGKAETGTGKTLAYLLPIIEKIDDSKNEMQAIILSPTHELGVQINNVLNDLKR 95
Query: 431 XLNAK 445
L K
Sbjct: 96 GLGKK 100
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/53 (50%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRXLAQQI 403
+L GRDV+ QAQ+GTGKTA F++ ++ +D + R+ Q L+LAPTR LA Q+
Sbjct: 41 ILSGRDVLGQAQTGTGKTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQV 93
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
++IAQA +G+GKTATF++++L ++DT I Q + L PTR LA+Q Q VV LG
Sbjct: 152 NLIAQAHNGSGKTATFALAMLGKVDTRIIHPQCMCLCPTRELARQNQDVVNELG 205
Score = 36.3 bits (80), Expect = 0.31
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
+ D+NL +LL+GIY GF +PS IQ A+
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAAL 143
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLNAK 445
++IAQ+QSGTGKTA F++ +L +D SI QA+ ++PT+ LA Q +V+ +G N K
Sbjct: 110 NLIAQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
Score = 46.0 bits (104), Expect = 4e-04
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +3
Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAAL 101
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 57.2 bits (132), Expect = 2e-07
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXL-NA 442
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT LA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 443 KCH 451
K H
Sbjct: 719 KIH 721
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
+L +DV QAQ+GTGKTA F I +L+ ID+ QA+IL PTR LA Q+
Sbjct: 38 ILAHKDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCPTRELAIQV 88
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 57.2 bits (132), Expect = 2e-07
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
LL GRDV+ QA +GTGKT +SIS+LQ+I Q LI+APTR LA QI + V
Sbjct: 36 LLTGRDVVGQAHTGTGKTGAYSISMLQEIKEG-GGIQGLIVAPTRELAVQITEEV 89
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
L+GRDV+ A++G+GKTA F++ IL ++ AL LAPTR LA Q+ + ALG
Sbjct: 112 LEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAP 171
Query: 434 LNAKC 448
L +C
Sbjct: 172 LGLRC 176
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLN 439
G D+I QA+SGTGKT F+ L + Q L+LAPTR +A QI VV+A+G +
Sbjct: 63 GLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAME 122
Query: 440 A-KCH 451
+CH
Sbjct: 123 GLECH 127
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 56.8 bits (131), Expect = 2e-07
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRXLAQQIQKVVIAL 424
A+L+G D+IA A++G+GKTA + + I+ +++T S ++LI+ PTR LA Q KV L
Sbjct: 46 AILRGNDIIAMARTGSGKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNEL 105
Query: 425 GDXLNAK 445
G N K
Sbjct: 106 GKLTNLK 112
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 56.8 bits (131), Expect = 2e-07
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
ALL GRDV+ QAQ+GTGKTA F++ +L + + + Q L+LAPTR LA Q+
Sbjct: 48 ALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQV 99
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
L+G+++ ++ +GTGKTA+F + IL++I+ + R QA+I+APTR LA QI + G
Sbjct: 36 LEGKNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSR 95
Query: 434 L 436
+
Sbjct: 96 I 96
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 56.8 bits (131), Expect = 2e-07
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
A+L GRDV AQ+GTGKTA F++ IL ++ R + L+L PTR LA Q+++
Sbjct: 166 AVLAGRDVTGSAQTGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEE 219
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 56.8 bits (131), Expect = 2e-07
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
D++A A++GTGKTA F + +LQ ID + QA+ILAPTR L QQI +I+ +
Sbjct: 43 DIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAE 97
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 56.8 bits (131), Expect = 2e-07
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI-QKVVIALGD 430
LQG+DVI QAQ+G+GKT F I L++I+ + QA++L PTR LA+Q+ Q+ A D
Sbjct: 39 LQGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKD 98
Query: 431 XLNAK 445
N K
Sbjct: 99 IGNIK 103
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 56.8 bits (131), Expect = 2e-07
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIAL 424
G DVIAQA+SGTGKT TF + L+++D R QAL LAPTR A Q + + +
Sbjct: 74 GCDVIAQAKSGTGKTMTFVVIALERVDAGRRRTQALALAPTRECAVQTHECFVEM 128
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
L+QG+ + AQ+G+GKTA F IS+L ++ CQA+I++PT+ L+ Q +V+ LG
Sbjct: 37 LIQGQSISVNAQTGSGKTAAFGISLLSLVNPQKSICQAVIISPTKELSNQTLEVINTLG 95
Score = 31.5 bits (68), Expect = 8.7
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+D+ +L++ IY YGFE PS +QQ +I
Sbjct: 6 FEDL-ASFDLIKAIYKYGFEIPSPVQQYSI 34
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 56.4 bits (130), Expect = 3e-07
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
G D+I +A+SGTGKT F I L+ ID I Q LILAPTR +A QI +V ++G
Sbjct: 33 GFDLIMRAKSGTGKTLVFCIISLEMIDIDISSVQVLILAPTREIAVQIAQVFSSVG 88
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 56.4 bits (130), Expect = 3e-07
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLN 439
G D+I QA+SGTGKT FS L + Q LILAPTR +A QI V+ A+G +
Sbjct: 100 GLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKME 159
Query: 440 A-KCH 451
+CH
Sbjct: 160 GLECH 164
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIM--PCSKDAMLSLK 281
F+ + L +L G+ A GFE+PS +Q +AI C D ++ K
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAK 108
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 56.4 bits (130), Expect = 3e-07
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
+L+G+D+I AQ+GTGKTA F+I ++ ++ + QALIL PTR L Q+ +
Sbjct: 43 ILKGKDIIGHAQTGTGKTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSE 95
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
A+L G DV A+A++G+GKTA F I +L +I S QAL+L PTR LA Q+ K
Sbjct: 37 AVLSGADVRAKAKTGSGKTAAFGIGLLDRIVVSDFTTQALVLCPTRELADQVSK 90
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 56.4 bits (130), Expect = 3e-07
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
+L+G+D+IA++ +GTGKT + I IL +ID + QA+ILAP+ LA QI + +
Sbjct: 44 ILEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSHELAMQIHQTI 98
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 56.4 bits (130), Expect = 3e-07
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
D++A AQ+GTGKTA F ++Q+ID + R QALIL+PTR L QI
Sbjct: 42 DLVALAQTGTGKTAAFGFPVIQKIDANNRNTQALILSPTRELCLQI 87
Score = 34.7 bits (76), Expect = 0.94
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI-MPCSKD 263
F+ + L E LLR I GFE P+ +Q++AI M KD
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKD 40
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 56.4 bits (130), Expect = 3e-07
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
D I AQ+GTGKTA F + +L ID + QALIL+PTR L QQI+K
Sbjct: 42 DFIGLAQTGTGKTAAFGLPVLHHIDANSDHIQALILSPTRELVQQIKK 89
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 56.4 bits (130), Expect = 3e-07
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLN 439
G D+I QA+SGTGKT FS L + Q LILAPTR +A QI V+ A+G +
Sbjct: 99 GLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKME 158
Query: 440 A-KCH 451
+CH
Sbjct: 159 GLECH 163
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIM--PCSKDAMLSLK 281
F+ + L +L G+ A GFE+PS +Q +AI C D ++ K
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAK 107
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 56.0 bits (129), Expect = 4e-07
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRE-CQALILAPTRXLAQQIQKVVIAL 424
LLQG+D++ AQ+GTGKTA FSI ILQ++ T R+ +AL+L PTR LA QI + A
Sbjct: 35 LLQGKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRKGIKALVLTPTRELAIQIGESFEAY 94
Query: 425 G 427
G
Sbjct: 95 G 95
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 56.0 bits (129), Expect = 4e-07
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRXLAQQIQKV 412
A+L G+DV+A AQ+GTGKTA F++ +LQ++ S + L+L PTR LA+Q+ +
Sbjct: 34 AVLGGKDVMAGAQTGTGKTAGFALPLLQRLVQHGPAVSSNRARVLVLVPTRELAEQVLQS 93
Query: 413 VIALGDXLNAK 445
IA G L+ +
Sbjct: 94 FIAYGKGLDLR 104
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 56.0 bits (129), Expect = 4e-07
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 6/58 (10%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRXLAQQIQK 409
L GRD+I +AQ+GTGKTA F I++LQ++ + E +ALILAPTR LA QI K
Sbjct: 133 LAGRDIIGKAQTGTGKTAAFLITVLQKLLTVKPEERFASEPRALILAPTRELAMQIAK 190
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 56.0 bits (129), Expect = 4e-07
Identities = 24/51 (47%), Positives = 40/51 (78%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
+L+ ++I Q+Q+GTGK+ F + ++Q ID+ I+E QA+++APTR LAQQ+
Sbjct: 38 ILKRTNLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQL 88
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 56.0 bits (129), Expect = 4e-07
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
R++IAQ+QSGTGKTA FS+++L +++ QA+ LAP+R LA+Q +VV +G
Sbjct: 132 RNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMG 186
Score = 43.6 bits (98), Expect = 0.002
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +3
Query: 150 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
++FD++ L ELL+GIYA F+KPS IQ+RA+
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERAL 123
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 55.6 bits (128), Expect = 5e-07
Identities = 23/55 (41%), Positives = 40/55 (72%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
+L+G+DVIA++ +GTGKT + + +L +I+ +++ Q ++LAPTR L QI + V
Sbjct: 32 ILEGQDVIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPTRELVMQIHEEV 86
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 55.6 bits (128), Expect = 5e-07
Identities = 23/66 (34%), Positives = 44/66 (66%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
LL+G++++ ++++G+GKTA+F+I + + I+ QALI+ PTR LA Q++ + +G
Sbjct: 37 LLKGQNLVVRSKTGSGKTASFAIPLCENINVDYNNIQALIVVPTRELALQVKDEISDIGR 96
Query: 431 XLNAKC 448
+C
Sbjct: 97 LKKVRC 102
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 55.6 bits (128), Expect = 5e-07
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
LL RDV+AQAQ+GTGKT F + IL++++ QALI+ PTR LA QI
Sbjct: 37 LLAQRDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALIITPTRELAIQI 87
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 55.6 bits (128), Expect = 5e-07
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQ 406
++ +DVIA+A +GTGKT F I +++ ID QAL+LAPTR LA QIQ
Sbjct: 47 MEWKDVIAKAPTGTGKTFAFGIPMVEHIDPESDAVQALVLAPTRELALQIQ 97
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 55.6 bits (128), Expect = 5e-07
Identities = 36/63 (57%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISI----LQQIDT-SIRECQALILAPTRXLAQQIQKVVI 418
L G+DV QAQ+GTGKTATF ISI L Q T +ALILAPTR L QI+K
Sbjct: 36 LTGKDVAGQAQTGTGKTATFLISIFTKLLSQAKTGGEHHPRALILAPTRELVVQIEKDAQ 95
Query: 419 ALG 427
ALG
Sbjct: 96 ALG 98
>UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 486
Score = 55.6 bits (128), Expect = 5e-07
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKV 412
LL GRD I AQ+G+GKT T+ + I ++T I QALI+ PTR L Q+ KV
Sbjct: 117 LLSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKV 170
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 55.2 bits (127), Expect = 6e-07
Identities = 22/55 (40%), Positives = 39/55 (70%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVI 418
L GRD++A+A++GTGK+ + I +L+++D QA+++ PTR LA Q+ ++ I
Sbjct: 116 LSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICI 170
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+D LK ELL GI+ G+E PS+IQ+ +I
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESI 112
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 55.2 bits (127), Expect = 6e-07
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPTRXLAQQIQKVV 415
+L+G D++ AQ+GTGKTA FS+ ILQ + R+ + LIL PTR LA QI + +
Sbjct: 38 ILEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENI 97
Query: 416 IALGDXLNAK 445
A LN K
Sbjct: 98 EAYSKHLNMK 107
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 55.2 bits (127), Expect = 6e-07
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDT----SIRECQALILAPTRXLAQQIQKVV 415
A+L+G+D++ AQ+G+GKTA+F + ILQ + T R AL+L PTR LA Q+ +V
Sbjct: 42 AILKGKDILGIAQTGSGKTASFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVF 101
Query: 416 IALGDXLNAK 445
A + L K
Sbjct: 102 QAFSNALPNK 111
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 55.2 bits (127), Expect = 6e-07
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRXLAQQIQKVV 415
A+L+G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTR LA Q+ + V
Sbjct: 38 AILEGQDVMAAAQTGTGKTAGFTLPLLEILSKGENAQSNQVRALVLTPTRELAAQVAESV 97
Query: 416 IALGDXLNAK 445
G L+ K
Sbjct: 98 KNYGQHLSLK 107
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 55.2 bits (127), Expect = 6e-07
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDT------SIRECQALILAPTRXLAQQIQK 409
A+L+GRD++A AQ+GTGKTA F++ +LQ + T R +ALIL PTR LA QI +
Sbjct: 34 AVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGE 93
Query: 410 VVIALGDXLNAK 445
V LN +
Sbjct: 94 NVRDYSKYLNIR 105
Score = 32.3 bits (70), Expect = 5.0
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
+FD + L ++LR + G+ +P+ IQQ+AI
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAI 32
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 55.2 bits (127), Expect = 6e-07
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLNA 442
+D+IAQA +G+GKT F + +L ++D + + QA+ + PTR LAQQ + V++ +G
Sbjct: 141 KDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGI 200
Query: 443 KC 448
C
Sbjct: 201 TC 202
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 54.8 bits (126), Expect = 8e-07
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
+ G+DV+ QA++GTGKTA F +S+L Q+ + L+L TR LA QI+ LG
Sbjct: 73 IHGKDVLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKF 132
Query: 434 LNAK 445
N K
Sbjct: 133 TNFK 136
Score = 36.7 bits (81), Expect = 0.23
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
+F+D +LK++LLR + GFE+PS +Q + I
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCI 69
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 54.8 bits (126), Expect = 8e-07
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRXLAQQI 403
+L+G+D++A AQ+GTGKTA F + I+Q + R ALIL PTR LAQQ+
Sbjct: 41 VLEGKDLLAAAQTGTGKTAAFGLPIIQAVQQKKRNGTPHALILVPTRELAQQV 93
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 54.8 bits (126), Expect = 8e-07
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQALILAPTRXLAQQIQKV 412
AL+ G D++ AQ+GTGKTA FS+ I+ +ID + ++LIL PTR LA QI +
Sbjct: 35 ALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQN 94
Query: 413 VIALGDXLNAK 445
+ D L K
Sbjct: 95 IDDYSDGLGLK 105
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 54.8 bits (126), Expect = 8e-07
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 8/71 (11%)
Frame = +2
Query: 221 FCNP--ATRNNALLQGRDVIAQAQSGTGKTATFSISILQQ-IDTSIRE----C-QALILA 376
+C P A ALL+GRD+ +AQ+GTGKTA F +++ + ++ + E C +AL+LA
Sbjct: 147 YCTPIQALTLPALLEGRDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLA 206
Query: 377 PTRXLAQQIQK 409
PTR LA QIQK
Sbjct: 207 PTRELAMQIQK 217
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 54.8 bits (126), Expect = 8e-07
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRXLAQQIQKVVIAL 424
L GRDV+ AQ+GTGKT F+ ILQ++ I R ++LIL PTR LA QIQ+ A
Sbjct: 36 LAGRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGRPIRSLILTPTRELALQIQESFEAY 95
Query: 425 GDXL 436
G L
Sbjct: 96 GKHL 99
Score = 35.9 bits (79), Expect = 0.41
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251
TF ++ L + +L+ + G+EKPS IQ++AI P
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPP 34
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 54.8 bits (126), Expect = 8e-07
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRXLAQQIQKVVIALG 427
+L GR+++A A +G+GKT FSI IL Q+ + + +ALI++PTR LA QI + +I +
Sbjct: 198 MLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKIS 257
Query: 428 DXLNAKCH 451
+ + H
Sbjct: 258 EGTGFRIH 265
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 54.8 bits (126), Expect = 8e-07
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRXLAQQIQKVVIALG 427
+L GR+++A A +G+GKT FSI IL Q+ + + +ALI++PTR LA QI + +I +
Sbjct: 199 MLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKIS 258
Query: 428 DXLNAKCH 451
+ + H
Sbjct: 259 EGTGFRIH 266
>UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic
initiation factor 4AI; n=1; Pan troglodytes|Rep:
PREDICTED: similar to eukaryotic initiation factor 4AI -
Pan troglodytes
Length = 151
Score = 54.4 bits (125), Expect = 1e-06
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQAL 367
+G DVIAQAQSGTGK ATF+ISILQQI+ ++ QAL
Sbjct: 27 EGYDVIAQAQSGTGKMATFAISILQQIELDLKATQAL 63
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 54.4 bits (125), Expect = 1e-06
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
+L+G +++ QA +GTGKTA + + +LQ+I ++ Q LI+ PTR LA Q+ V LG
Sbjct: 36 ILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGK 94
Query: 431 XLNAK 445
L +
Sbjct: 95 YLKVR 99
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 54.4 bits (125), Expect = 1e-06
Identities = 23/50 (46%), Positives = 37/50 (74%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
++G+D+I ++++GTGKTA F + +L++I R +ALIL PTR LA Q+
Sbjct: 64 IEGKDLIVRSKTGTGKTAAFGLPLLEKIPADERRVRALILCPTRELALQV 113
Score = 32.3 bits (70), Expect = 5.0
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC--SKDAMLSLK 281
FDDMNL E + + G+ P+ +Q RA P KD ++ K
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSK 74
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 54.4 bits (125), Expect = 1e-06
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
QG DVI QA++G+GKTA F + IL++ S + QAL+LAPTR LA Q+
Sbjct: 41 QGTDVIGQARTGSGKTAAFGLPILERCQPS-GKLQALVLAPTRELANQV 88
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 54.4 bits (125), Expect = 1e-06
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKV 412
LL+GRD+I Q+ SGTGKT + I Q+ SI Q LIL PTR L+ QI+ V
Sbjct: 44 LLKGRDIIYQSPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPTRELSIQIRNV 97
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 54.4 bits (125), Expect = 1e-06
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPTRXLAQQIQKVVIAL 424
+L+GRDV+A A++G+GKTA F I + +++ + +ALIL+PTR LA Q K + L
Sbjct: 73 ILEGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKEL 132
Query: 425 GDXLNAK 445
G + K
Sbjct: 133 GRFMELK 139
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 54.4 bits (125), Expect = 1e-06
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIAL 424
+L RDV+A+A++GTGKT +F I ILQ ++ + QAL+L TR LA Q KV L
Sbjct: 55 ILARRDVVARAKNGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTL 112
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 54.4 bits (125), Expect = 1e-06
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = +2
Query: 245 NALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIAL 424
NALL G +I QA++GTGKTA F +++L I+T + + L++ TR LAQQ + + L
Sbjct: 106 NALL-GEQLICQAKAGTGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRL 164
Query: 425 GDXLNA 442
G + +
Sbjct: 165 GKFMKS 170
Score = 33.1 bits (72), Expect = 2.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
V F + LKEELLR + GFE P+ +Q ++
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESL 104
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 54.0 bits (124), Expect = 1e-06
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIAL 424
A L G D+IA AQ+G+GKT F++S+L + E + LIL P+R +AQQI KV + L
Sbjct: 66 ASLDGSDIIAIAQTGSGKTLAFALSLLTTLQKK-PEARGLILVPSREMAQQIYKVFLEL 123
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 54.0 bits (124), Expect = 1e-06
Identities = 23/55 (41%), Positives = 40/55 (72%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
++ G+DVIA++ +GTGKT +++ +L++I + QA+ILAP+R L QI +V+
Sbjct: 38 IMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVI 92
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 54.0 bits (124), Expect = 1e-06
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
L +D+I ++ +GTGKT F + ILQ ++T +++ QA+IL PT LA QI
Sbjct: 36 LNSQDIIGKSHTGTGKTVAFIVPILQNLNTHLKQPQAIILCPTHELASQI 85
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 54.0 bits (124), Expect = 1e-06
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQID---TSIRECQALILAPTRXLAQQIQKVVIA 421
L+ GRD++ QA +GTGKTA F++ +L ++ T QAL+L PTR LA Q+ + +
Sbjct: 91 LVAGRDLLGQAATGTGKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHR 150
Query: 422 LGDXLNAK 445
G L A+
Sbjct: 151 YGRDLGAR 158
Score = 36.7 bits (81), Expect = 0.23
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 126 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPP 90
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 54.0 bits (124), Expect = 1e-06
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILAPTRXLAQQIQKV 412
A+L +D++ AQ+GTGKTA F++ ++QQ I R +A+IL+PTR LA QI +
Sbjct: 136 AVLNSKDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEA 195
Query: 413 VIALGDXL 436
++ G L
Sbjct: 196 FVSFGKRL 203
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 54.0 bits (124), Expect = 1e-06
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPTRXLAQQI 403
AL +D+IAQAQ+GTGKTA F I +L++ID + +A+I+ PTR LA QI
Sbjct: 52 ALSTDKDLIAQAQTGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQI 104
Score = 33.5 bits (73), Expect = 2.2
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 150 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251
E F+D L EE+L I G+EKP+ I Q+ ++P
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEI-QKIVLP 50
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 54.0 bits (124), Expect = 1e-06
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIAL 424
G+DVI ++++GTGKTA F+I IL++I R AL++ PTR LA Q+ + AL
Sbjct: 57 GKDVIVRSKTGTGKTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTAL 111
>UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2;
Plasmodium chabaudi|Rep: DEAD-box RNA helicase, putative
- Plasmodium chabaudi
Length = 374
Score = 54.0 bits (124), Expect = 1e-06
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLNA 442
R++IAQ+Q+G+GKT TF I++L +I+ ++ QA+ + PTR LAQQ VV LN
Sbjct: 263 RNLIAQSQNGSGKTLTFVIAMLSKINRALYSLQAVCICPTRELAQQNYDVVGKFTKYLNV 322
Query: 443 K 445
+
Sbjct: 323 R 323
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 54.0 bits (124), Expect = 1e-06
Identities = 21/53 (39%), Positives = 38/53 (71%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKV 412
L GRD++A+A++GTGK+ + I +L+++D QA+++ PTR LA Q+ ++
Sbjct: 131 LSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQI 183
Score = 38.3 bits (85), Expect = 0.076
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+D LK ELL GI+ G+EKPS IQ+ +I
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESI 127
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 54.0 bits (124), Expect = 1e-06
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
LQGRD+I A++G+GKT F++ IL + + + AL+L PTR LA QI + ALG
Sbjct: 48 LQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSS 107
Query: 434 LNAK 445
+ +
Sbjct: 108 IGVQ 111
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 54.0 bits (124), Expect = 1e-06
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
++G+D+I QA++GTGKTA F I +++ I + + Q L++ PTR LA Q+ + + +G
Sbjct: 37 MEGKDLIGQARTGTGKTAAFGIPMVEAIRPTSKGVQGLVVVPTRELAVQVAEELTRIG 94
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 54.0 bits (124), Expect = 1e-06
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
G DVI QA+SG GKTA F +S LQQI+ S + AL+L TR LA QI
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQI 130
Score = 32.3 bits (70), Expect = 5.0
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F D LK ELLR I GFE PS +Q I
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECI 77
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 54.0 bits (124), Expect = 1e-06
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
LQGRD+I A++G+GKT F++ IL + + + AL+L PTR LA QI + ALG
Sbjct: 59 LQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSS 118
Query: 434 LNAK 445
+ +
Sbjct: 119 IGVQ 122
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/59 (42%), Positives = 45/59 (76%), Gaps = 5/59 (8%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRE--CQALILAPTRXLAQQIQKVV 415
L+G+D++A+A++G+GKTA +++ ++Q+I S+RE +ALIL PT+ L QQ+Q ++
Sbjct: 41 LEGKDLLARARTGSGKTAAYAVPVIQRILASKQSVREQDVKALILVPTKELGQQVQTMI 99
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 53.6 bits (123), Expect = 2e-06
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRXLAQQIQKVV 415
+L+GRDVIA AQ+GTGKTA + + IL ++ + + A+I+APTR LAQQI + V
Sbjct: 35 ILEGRDVIACAQTGTGKTAAYLLPILDRLSAGEFASDVVNAVIMAPTRELAQQIDQQV 92
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 53.6 bits (123), Expect = 2e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
D++ AQ+GTGKTA F I ++Q DT ++ QAL+L PTR L Q+
Sbjct: 42 DLVGLAQTGTGKTAAFGIPLIQLTDTRLKRTQALVLCPTRELCVQV 87
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/69 (39%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALILAPTRXLAQQIQKVVI 418
+L+G D++A+AQ+GTGKTA+F++ I++++ + R +AL+LAPTR LA Q+ +
Sbjct: 38 VLRGDDLLAEAQTGTGKTASFALPIIEKLSKNPIDGYRPVRALVLAPTRELAIQVADNTL 97
Query: 419 ALGDXLNAK 445
G L +
Sbjct: 98 EYGRDLGMR 106
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
L+G+D+IA++++G+GKTA F+I I + I QAL+L PTR LA Q++ + +G
Sbjct: 39 LEGKDIIAKSKTGSGKTAAFAIPICESIVWEENLPQALVLEPTRELAYQVKDEIFNVG 96
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 53.6 bits (123), Expect = 2e-06
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDT----SIRECQALILAPTRXLAQQIQKVV 415
A+L GRDV+ AQ+G+GKTA F++ +LQQ+ + R + LIL PTR LA Q+ + +
Sbjct: 38 AILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPRPTRGLILVPTRELAAQVGEAI 97
Query: 416 IALGDXL 436
L
Sbjct: 98 AGFAKYL 104
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRXLAQQIQK 409
A+L GRDV+A A +G+GKTA F++ +LQ++ + S + + L+L PTR LAQQ+
Sbjct: 42 AVLSGRDVLAGANTGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVAD 101
Query: 410 VVIALGDXLNAK 445
++ N +
Sbjct: 102 SFLSYASHFNGQ 113
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 53.6 bits (123), Expect = 2e-06
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQ 406
L GRD++ Q+++G+GKT F + +L+++D + QAL+L PTR LA Q++
Sbjct: 71 LFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAEASTQALVLVPTRELALQVE 122
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 53.6 bits (123), Expect = 2e-06
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQ--IDTSIRECQ---ALILAPTRXLAQQIQKVVI 418
L GRD++ A++G+GKTA F+I +LQ + IR AL+LAPTR LAQQI+K V
Sbjct: 153 LSGRDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQ 212
Query: 419 ALGDXLNA 442
A L +
Sbjct: 213 AFSRSLES 220
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
L +++IAQ+Q+G+GKT TF I++L +I+ ++ QA+ + PTR L+QQ VV
Sbjct: 195 LSSNKNLIAQSQNGSGKTLTFVIAMLCKINRTLSSLQAVCICPTRELSQQNYDVVCNFTK 254
Query: 431 XLNAK 445
LN K
Sbjct: 255 YLNVK 259
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQ 400
++ GRD+ AQAQSGTGKT F+++ LQ D S Q L+LA TR +A Q
Sbjct: 72 IIDGRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQ 121
Score = 48.4 bits (110), Expect = 7e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +3
Query: 126 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQP 71
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 53.2 bits (122), Expect = 3e-06
Identities = 23/57 (40%), Positives = 39/57 (68%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIAL 424
L+G D++ QA +GTGKT F+I I++++ + +AL+L PTR LA Q+++ + L
Sbjct: 35 LEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPTRELAIQVKEQIYML 91
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 53.2 bits (122), Expect = 3e-06
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLN 439
G D+I +++SGTGKT FS L+ ++T+ Q LIL PTR +A QI+ V+ ++G +N
Sbjct: 61 GFDLIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVN 120
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 5/54 (9%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRXLAQQI 403
+G D+ A AQ+GTGKTA FS+ ++QQ+ S + +ALI APTR LA+QI
Sbjct: 37 RGHDIFATAQTGTGKTAAFSLPLIQQLLESGKSASRKTARALIFAPTRELAEQI 90
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 53.2 bits (122), Expect = 3e-06
Identities = 22/58 (37%), Positives = 41/58 (70%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
LQ +D++ ++Q+G+GKTA+F I + + ++ + QAL+L PTR LA Q+++ + +G
Sbjct: 39 LQKKDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIG 96
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKV 412
LL+G D++ A +G+GKTA F + +LQ ID R Q LI+ PTR LA QI V
Sbjct: 40 LLKGCDLLGMAHTGSGKTAAFLLPLLQNIDIKQRFVQGLIIVPTRELAIQIGHV 93
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 53.2 bits (122), Expect = 3e-06
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQID------TSIRECQALILAPTRXLAQQIQKV 412
LL+G D++ AQ+GTGKTA F+I ILQ + R+ +AL+LAPTR LA QI +
Sbjct: 35 LLEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAES 94
Query: 413 VIALG 427
A G
Sbjct: 95 FTAYG 99
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 53.2 bits (122), Expect = 3e-06
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQALILAPTRXLAQQI 403
+L+G D++ AQ+GTGKTA F + IL +I + R C+AL+LAPTR LA QI
Sbjct: 91 MLEGHDLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQI 146
>UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 382
Score = 53.2 bits (122), Expect = 3e-06
Identities = 20/56 (35%), Positives = 43/56 (76%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
A+L+G+D++A++ +G+GKT + + +L +++ + ++ Q LI+AP++ LA QI +V+
Sbjct: 30 AMLEGKDIVAESPTGSGKTLAYVLPLLNKVNGAKKQTQGLIVAPSQELAMQIVEVI 85
>UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG13685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13685 - Caenorhabditis
briggsae
Length = 935
Score = 53.2 bits (122), Expect = 3e-06
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
L GRD++ QA+SGTGKT FS+ ++ +D Q +I+ PTR ++ QI++ V
Sbjct: 49 LLGRDMLVQAKSGTGKTLVFSVLAVENLDLKAHYIQKVIITPTREISTQIKETV 102
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 53.2 bits (122), Expect = 3e-06
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
LQG D++ QAQ+GTGKT F I +++++ + Q+LILAPTR LA Q+
Sbjct: 37 LQGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPTRELAMQV 85
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 53.2 bits (122), Expect = 3e-06
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
+ +IAQA +G+GKT F + +L ++D ++RE QAL + PTR LA Q +V+ +G
Sbjct: 132 KHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMG 186
Score = 33.9 bits (74), Expect = 1.6
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYA-YGFEKPSAIQ 233
F+D+NL EL++G+Y FEKPS IQ
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQ 119
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 53.2 bits (122), Expect = 3e-06
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
A+L+GRD + A++G+GKTA F + ILQ++ L+L PTR LA QI + LG
Sbjct: 35 AILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLG 94
Query: 428 DXLNAK 445
L K
Sbjct: 95 KPLGLK 100
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 53.2 bits (122), Expect = 3e-06
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRXLAQQIQKVVIAL 424
LL G+DV+ A++G+GKT F + + + D R Q L+++PTR LA QI +I L
Sbjct: 146 LLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLIVL 205
Query: 425 GDXLNAKC 448
D + +C
Sbjct: 206 TDKVGMQC 213
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 52.8 bits (121), Expect = 3e-06
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRXLAQQIQKVVIALG 427
L GRDV+A A++G+GKTA F I + +++ T + +ALIL+PTR LA Q Q+ + +G
Sbjct: 73 LDGRDVVAMARTGSGKTACFLIPMFEKLKTRQAKTGARALILSPTRELALQTQRFIKEIG 132
>UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
R27090_2 - Ornithorhynchus anatinus
Length = 332
Score = 52.8 bits (121), Expect = 3e-06
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
A+L+GRD + A++G+GKTA F + ILQ++ L+L PTR LA QI + LG
Sbjct: 35 AILEGRDCMGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLG 94
Query: 428 DXLNAK 445
L K
Sbjct: 95 KPLGLK 100
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 52.8 bits (121), Expect = 3e-06
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRXLAQQIQKVV 415
L+G+D++ AQ+G+GKTA FS+ ILQ+I + +ALILAPTR LA QI++ +
Sbjct: 122 LEGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTI 180
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 52.8 bits (121), Expect = 3e-06
Identities = 28/54 (51%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRXLAQQIQKV 412
L GRD++A AQ+GTGKT F I L+ + DT Q LIL PTR LA Q+ V
Sbjct: 62 LDGRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGV 115
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 52.8 bits (121), Expect = 3e-06
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPTRXLAQQIQKVV 415
A+L G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTR LA Q+ + V
Sbjct: 34 AVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESV 93
Query: 416 IALGDXL 436
G L
Sbjct: 94 ETYGKYL 100
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 52.8 bits (121), Expect = 3e-06
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIR---ECQALILAPTRXLAQQIQKVVIA 421
LL+G+D++ A +GTGKTA FS+ +LQ+I AL+L PTR LA Q+ + +
Sbjct: 70 LLEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHR 129
Query: 422 LGDXL 436
G L
Sbjct: 130 YGQKL 134
Score = 31.9 bits (69), Expect = 6.6
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 84 GSYDGPPG-MDPGTLDT---DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251
G D PPG +D T + + TF+ + L L+ + A G+E+P+ IQ+ A+ P
Sbjct: 10 GRCDFPPGGIDGATSPSTVKETSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPP 69
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 52.8 bits (121), Expect = 3e-06
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRXLAQQIQKVVIAL 424
L G+D++A AQ+GTGKT F + +Q + T R+ +ALIL PTR LA QI + ++ +
Sbjct: 37 LAGKDIVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALILTPTRELALQINEALLQI 95
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 52.8 bits (121), Expect = 3e-06
Identities = 24/57 (42%), Positives = 41/57 (71%), Gaps = 5/57 (8%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-----ECQALILAPTRXLAQQI 403
A++QG+D++A A++GTGKTA F++ IL+++ + R + + L+L PTR LA Q+
Sbjct: 34 AIMQGKDILAGARTGTGKTAAFALPILEKLSSKERNKKRPQTRVLVLVPTRELANQV 90
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 52.8 bits (121), Expect = 3e-06
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPTRXLAQQIQKVV 415
A+L G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTR LA Q+ + V
Sbjct: 34 AVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESV 93
Query: 416 IALGDXL 436
G L
Sbjct: 94 ETYGKYL 100
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 52.8 bits (121), Expect = 3e-06
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +3
Query: 165 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCSK 260
M LKE LLRGIYAYG EKPSAIQQ+ I+P K
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCK 32
Score = 42.3 bits (95), Expect = 0.005
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI 337
+G DVI QAQSGTGKTATF ILQQ+
Sbjct: 32 KGLDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-PA
- Drosophila melanogaster (Fruit fly)
Length = 560
Score = 52.8 bits (121), Expect = 3e-06
Identities = 29/88 (32%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Frame = +2
Query: 167 EPQRRIVERHIRLWF*KTFCNPATRNNALLQGRDVIAQAQSGTGKTATFSISILQQI--- 337
E +RI++ +L + + +T LL+G+DV+ +A++G+GKTAT+++ ++Q+I
Sbjct: 15 ELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKILNS 74
Query: 338 --DTSIRECQALILAPTRXLAQQIQKVV 415
+ S + A++LAPT+ L +Q +KV+
Sbjct: 75 KLNASEQYVSAVVLAPTKELCRQSRKVI 102
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 52.8 bits (121), Expect = 3e-06
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRXLAQQIQKVVIALG 427
++ G+DV+A +++G+GKTA F I +LQ++ +AL+++PTR LA Q KVV LG
Sbjct: 58 IMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELG 117
Query: 428 DXLNAKC 448
+C
Sbjct: 118 RFTGLRC 124
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 52.8 bits (121), Expect = 3e-06
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
L GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTR ++ QI++ V
Sbjct: 57 LLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 52.8 bits (121), Expect = 3e-06
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTS-------IRECQALILAPTRXLAQQIQKV 412
L+G+D I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+APTR L QI K
Sbjct: 44 LRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKD 103
Query: 413 VIAL 424
AL
Sbjct: 104 AAAL 107
>UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 56; n=1; Danio rerio|Rep: DEAD
(Asp-Glu-Ala-Asp) box polypeptide 56 - Danio rerio
Length = 344
Score = 52.4 bits (120), Expect = 4e-06
Identities = 23/59 (38%), Positives = 46/59 (77%), Gaps = 5/59 (8%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTS---IRE--CQALILAPTRXLAQQIQKVV 415
L+G+D++A+A++G+GKTA +++ ++Q++ TS +RE +A++L PT+ L QQ+Q ++
Sbjct: 25 LEGKDLLARARTGSGKTAAYAVPLIQRVLTSKQTVREQAVRAVVLVPTKELGQQVQTMI 83
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 52.4 bits (120), Expect = 4e-06
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQID--TSI-RECQALILAPTRXLAQQIQKVV 415
LQGRD++ AQ+G+GKTA F I +L ++ TS + +ALIL PTR LAQQ+ V
Sbjct: 79 LQGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSV 135
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 52.4 bits (120), Expect = 4e-06
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
L GRD+I Q+Q+G+GKT F + + ++ E Q LIL PTR LA+QI +
Sbjct: 76 LDGRDLIVQSQTGSGKTGAFLLPLFDLVNPDKEEQQVLILTPTRELARQIHE 127
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 52.4 bits (120), Expect = 4e-06
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILAPTRXLAQQIQKV 412
A+ +G DV+A AQ+GTGKTA F++ ILQ+ + +ALIL PTR LA Q+
Sbjct: 34 AIRRGEDVLASAQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVADN 93
Query: 413 VIALGDXLN 439
+ A +N
Sbjct: 94 ISAYSKHMN 102
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 52.4 bits (120), Expect = 4e-06
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
L G + A +GTGKT F + +L +IDT+++ Q LILAP++ LA Q +V G+
Sbjct: 27 LTDGDSIFGLAPTGTGKTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVAREWGN 86
Query: 431 XLNA 442
+ A
Sbjct: 87 AVGA 90
>UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5;
Endopterygota|Rep: ENSANGP00000011621 - Anopheles
gambiae str. PEST
Length = 523
Score = 52.4 bits (120), Expect = 4e-06
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC--QALILAPTRXLAQQIQKVVIAL 424
LL+ + A A +G+GKTA F I IL + ++ C +ALI+ PTR LA+Q Q+ + L
Sbjct: 176 LLKTHSLHACAPTGSGKTAAFLIPILHHLKKPMK-CGFRALIICPTRELAKQTQREALRL 234
Query: 425 GDXLNAKCH 451
GD +N + H
Sbjct: 235 GDEMNLRTH 243
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 52.4 bits (120), Expect = 4e-06
Identities = 23/56 (41%), Positives = 43/56 (76%), Gaps = 5/56 (8%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRXLAQQIQ 406
LQG+D++A+A++G+GKTA +SI I+Q++ ++I+ +A++L PTR L +Q++
Sbjct: 58 LQGKDILAKARTGSGKTAAYSIPIIQKVLMAKEKSNIKGVKAVVLVPTRELCEQVK 113
Score = 31.9 bits (69), Expect = 6.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
TF+ M L +LR + GF+ PS +Q ++I
Sbjct: 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSI 54
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 52.4 bits (120), Expect = 4e-06
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRXLAQQIQKVVIAL 424
L G+D++A A +G+GKTA F + +L+++ D+ R + LIL PTR LA Q Q V+ L
Sbjct: 225 LNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENL 284
Query: 425 GDXLN 439
N
Sbjct: 285 AQFSN 289
Score = 32.7 bits (71), Expect = 3.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +3
Query: 138 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
++ + TF++++L LL+ + GF +P+ IQ +AI
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAI 221
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 52.4 bits (120), Expect = 4e-06
Identities = 23/57 (40%), Positives = 41/57 (71%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
QG++++ Q+Q+G+GKTATFSI L ++ + + + +I++PTR LA Q + + +LG
Sbjct: 56 QGKNIMFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG 112
Score = 39.9 bits (89), Expect = 0.025
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 141 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
+V T++ M LK EL+ I G+EKPS IQQRAI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAI 51
>UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-8 -
Neurospora crassa
Length = 626
Score = 52.4 bits (120), Expect = 4e-06
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIAL 424
+L+GRD I +++G+GKT F++ ILQQ + +IL PTR LA QI + VIAL
Sbjct: 229 ILKGRDCIGGSRTGSGKTVAFAVPILQQWAANPSAIFGVILTPTRELALQIMEQVIAL 286
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 52.0 bits (119), Expect = 6e-06
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 8/71 (11%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI----DTSI----RECQALILAPTRXLAQQI 403
++L G+DV+A AQ+GTGKTA F++ +L ++ +TS+ +ALI+APTR LA QI
Sbjct: 38 SILAGKDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQI 97
Query: 404 QKVVIALGDXL 436
+ V G L
Sbjct: 98 DESVRKYGKYL 108
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 52.0 bits (119), Expect = 6e-06
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQ 406
LQGRD + QA++GTGKTA F + IL + + ALILAPTR LA QI+
Sbjct: 7 LQGRDCLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIR 54
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 52.0 bits (119), Expect = 6e-06
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
+L+G D+IAQAQ+GTGKTA F + I+ + + L++ PTR LA Q+ + G
Sbjct: 35 VLEGHDMIAQAQTGTGKTAAFGLPIMSMMKAD-GSVEGLVIVPTRELAMQVSDELFRFG 92
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 52.0 bits (119), Expect = 6e-06
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC-----QALILAPTRXLAQQIQKV 412
A L+GRDV+ AQ+GTGKTA ++ IL Q+ + R+ AL+LAPTR LA QI
Sbjct: 35 AALEGRDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDS 94
Query: 413 VIALGDXLNAK 445
A G L +
Sbjct: 95 FDAYGRHLKLR 105
>UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL'
isoform 5; n=2; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 5 - Nicotiana
tabacum (Common tobacco)
Length = 390
Score = 52.0 bits (119), Expect = 6e-06
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIAL 424
L GRD + AQ+G+GKT + + +L ID+ QALI+ PTR L Q+ KV L
Sbjct: 101 LYSGRDCVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTL 158
>UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat).
ROK1-like protein; n=2; Dictyostelium discoideum|Rep:
Similar to Rattus norvegicus (Rat). ROK1-like protein -
Dictyostelium discoideum (Slime mold)
Length = 668
Score = 52.0 bits (119), Expect = 6e-06
Identities = 28/54 (51%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPTRXLAQQIQK 409
LL+ R+V+A A +G+GKTA+FSI ILQ + +E +++I+APTR LAQQI +
Sbjct: 233 LLKEREVVAIAPTGSGKTASFSIPILQALYEPKKEGFRSVIIAPTRELAQQIYR 286
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 52.0 bits (119), Expect = 6e-06
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
L+G+D++A+A++G+GKT + I I+Q+I I +ALI+ PTR L QI+ VV
Sbjct: 46 LKGKDILAKARTGSGKTGAYLIPIVQRI-LHIASTRALIIGPTRELCSQIEAVV 98
>UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n=3;
Leishmania|Rep: ATP-dependent RNA helicase, putative -
Leishmania major
Length = 625
Score = 52.0 bits (119), Expect = 6e-06
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
A+L GR V+ A +G+GKTA F++ ILQ + AL+L P+R LA QI IA G
Sbjct: 35 AILAGRHVVGGAATGSGKTAAFALPILQTLAADAYGVFALVLTPSRELAYQIIDQFIAFG 94
Query: 428 DXLNAK 445
L +
Sbjct: 95 APLRVR 100
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 52.0 bits (119), Expect = 6e-06
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRXLAQQIQKV 412
L+G+D I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+APTR L QI K
Sbjct: 44 LRGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKD 103
Query: 413 VIAL 424
AL
Sbjct: 104 AAAL 107
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 52.0 bits (119), Expect = 6e-06
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQID------TSIREC----QALILAPTRXLAQQI 403
LQGRD+IA+A++GTGKT F I I++++ T+ R + L+LAPTR LA+Q+
Sbjct: 137 LQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQV 196
Query: 404 QKVVIALGDXLNAKC 448
+K + L+ C
Sbjct: 197 EKEIKESAPYLSTVC 211
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 52.0 bits (119), Expect = 6e-06
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSI--RECQALILAPTRXLAQQIQKVV 415
LL+GRDV+ A++G+GKTA F I +++ + +++ +ALIL+P R LA Q KVV
Sbjct: 103 LLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVV 159
Score = 31.5 bits (68), Expect = 8.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F M L + LLR I+ GF+ P+ IQ++ I
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTI 100
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 51.6 bits (118), Expect = 8e-06
Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRXLAQQI 403
L+ GRD++ QAQ+GTGKTA F++ +++++ D + L++ PTR LA Q+
Sbjct: 85 LMLGRDLLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLVMTPTRELATQV 136
>UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein
precursor; n=1; Ralstonia metallidurans CH34|Rep:
DEAD/DEAH box helicase-like protein precursor -
Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM
2839)
Length = 227
Score = 51.6 bits (118), Expect = 8e-06
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
L GRD+I QA G+G+T F++++L +D + QAL+L PTR +++Q V + D
Sbjct: 51 LAGRDLIVQASPGSGRTVAFTVALLHHLDPRRFDVQALVLCPTR---ERVQHVAQCIRDC 107
Query: 434 LNAKCH 451
+ A H
Sbjct: 108 VRAARH 113
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 51.6 bits (118), Expect = 8e-06
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQID---TSIREC--QALILAPTRXLAQQI 403
LL+G D+I AQ+GTGKTA F++ IL Q+D + C Q L+L+PTR LA QI
Sbjct: 30 LLEGSDLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQI 85
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 51.6 bits (118), Expect = 8e-06
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATF---SISILQQIDTSI--RECQALILAPTRXLAQQI 403
+L+GRD++ AQ+GTGKTA F SI L++ D I + C+ L+LAPTR L QI
Sbjct: 36 VLEGRDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQI 91
>UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 606
Score = 51.6 bits (118), Expect = 8e-06
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA----LILAPTRXLAQQIQKVVI 418
+L G DV+AQA++GTGKT F + ++Q++ ++ A LIL+PTR LAQQI +V
Sbjct: 101 ILAGDDVLAQAKTGTGKTLAFLVPVVQRLLSAPMPPSALTSILILSPTRELAQQINEVAE 160
Query: 419 ALGDXLNAK 445
+ L+ K
Sbjct: 161 RMSTALSKK 169
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 51.6 bits (118), Expect = 8e-06
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRXLAQQIQKVVIAL 424
+L G DV+A A++G+GKTA F I +L+++ + + +ALIL+PTR LA+Q K L
Sbjct: 62 ILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKEL 121
Query: 425 G 427
G
Sbjct: 122 G 122
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 51.6 bits (118), Expect = 8e-06
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSI------RECQALILAPTRXLAQQIQKVVIA 421
G+D+IAQA++GTGKT +F+I +++++ + R Q L+LAPTR LA Q+ K
Sbjct: 223 GKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKDFSD 282
Query: 422 LGDXLNAKC 448
+ L+ C
Sbjct: 283 ITKKLSVAC 291
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIAL 424
+ G D++ QAQ+GTGKTA+F I IL ++ QAL+L PTR LA Q+ + + +L
Sbjct: 39 MAGLDLMGQAQTGTGKTASFGIPILNRVIKG-EGLQALVLCPTRELAVQVTEEISSL 94
Score = 32.3 bits (70), Expect = 5.0
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 150 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
E F M LK +LL+ I GFEKP+ IQ ++I
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSI 35
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
+QGRD A++G+GKT F++ ILQ++ AL+L PTR LA QI++ + A G+
Sbjct: 96 MQGRDFCGIARTGSGKTLCFALPILQELSQDPYGIFALVLTPTRELALQIEQQMNAYGNP 155
Query: 434 L 436
L
Sbjct: 156 L 156
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 51.2 bits (117), Expect = 1e-05
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI--DT--SIRECQALILAPTRXLAQQIQKVVIA 421
LQGRD+I QA++G+GKT + I IL+ I D SI +LIL PTR LA Q+ V+
Sbjct: 106 LQGRDIIGQARTGSGKTLAYVIPILENIYRDNYCSIDGLLSLILTPTRELASQVFDVIKE 165
Query: 422 LG 427
+G
Sbjct: 166 IG 167
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
L G D++ Q++SGTGKT + ++ LQ S + + L++ PTR LA Q+ + LG+
Sbjct: 60 LTGMDLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEK 119
Query: 434 LNA 442
L +
Sbjct: 120 LRS 122
>UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase
CG1666-PA isoform 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to Helicase CG1666-PA isoform 1 - Apis mellifera
Length = 547
Score = 50.8 bits (116), Expect = 1e-05
Identities = 23/63 (36%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRXLAQQIQKVV 415
+++G+D++ +A++G+GKTA F+I ++Q+I +E + LI+AP++ L +QI V+
Sbjct: 46 MIEGKDILIRARTGSGKTAAFTIPLIQKILSNKQTRKQQEIKGLIIAPSKELCKQIHDVI 105
Query: 416 IAL 424
I+L
Sbjct: 106 ISL 108
>UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep:
SrmB - Mycoplasma gallisepticum
Length = 457
Score = 50.8 bits (116), Expect = 1e-05
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
LL+ +++I A +GTGKT F + ILQ +D + QA+I+ PTR LA QI+ V+
Sbjct: 35 LLKQKNLIGVAPTGTGKTLAFLLPILQNLDFAQNLIQAVIIVPTRELANQIKSVL 89
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 50.8 bits (116), Expect = 1e-05
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQ 400
+D+IA +Q+G+GKTAT +I I +++T + + QALI+ PTR LA Q
Sbjct: 53 QDLIALSQTGSGKTATCAIPICNRVNTELTDIQALIIVPTRELALQ 98
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 50.8 bits (116), Expect = 1e-05
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 8/59 (13%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQ----QIDTSI----RECQALILAPTRXLAQQI 403
+L GRDV+ AQ+GTGKTA+FS+ I+Q Q +TS +ALIL PTR LA Q+
Sbjct: 45 VLSGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQV 103
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 50.8 bits (116), Expect = 1e-05
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRXLAQQIQKVVIA 421
+L +DV+A A +GTGKTA F + LQ + R+ + LILAPTR LA QI KVV
Sbjct: 35 MLLSKDVLAGAATGTGKTAAFVLPALQFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQ 94
Query: 422 LG 427
LG
Sbjct: 95 LG 96
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 50.8 bits (116), Expect = 1e-05
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQALILAPTRXLAQQIQKVVI 418
L GRD++ AQ+GTGKTA F++ +L + T + R +ALIL+PTR LA QI + +
Sbjct: 39 LAGRDMLGIAQTGTGKTAAFALPLLHHLMTVGGKPTTRTTKALILSPTRELAVQIAESIA 98
Query: 419 ALGD 430
L +
Sbjct: 99 DLSE 102
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 50.8 bits (116), Expect = 1e-05
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQ-IDTSIRECQALILAPTRXLAQQIQKVVIALG 427
++ G DVI AQ+GTGKTA +++ I+Q+ + T + L++APTR LA QI +LG
Sbjct: 35 IMAGHDVIGLAQTGTGKTAAYALPIIQKMLSTPRGRVRTLVIAPTRELACQISDSFRSLG 94
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 50.8 bits (116), Expect = 1e-05
Identities = 23/53 (43%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRXLAQQI 403
L+G+D++A AQ+GTGKTA+F++ +L+Q+ + +AL++ PTR LA Q+
Sbjct: 57 LEGKDIMACAQTGTGKTASFALPVLEQLSKQPNDKPLLRALVMTPTRELAIQV 109
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 50.8 bits (116), Expect = 1e-05
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQ 406
+L+G+D+I A +G+GKT F I+Q+I+ +AL+L PTR LA+Q+Q
Sbjct: 36 ILEGKDIIGGAATGSGKTLAFGCGIIQKIEKG-NGIRALVLTPTRELAEQVQ 86
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 50.8 bits (116), Expect = 1e-05
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRXLAQQIQKVVIAL 424
+L G+DV+A A++G+GKTA F + + +++ T + +ALIL+PTR LA Q K L
Sbjct: 130 ILDGKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKEL 189
Query: 425 GDXLNAK 445
G K
Sbjct: 190 GKFTGLK 196
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 50.8 bits (116), Expect = 1e-05
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISIL---------QQIDTSIRECQALILAPTRXLAQQIQ 406
LQ RD+I A++G+GKTA F I +L +I+ S + A+ILAPTR LAQQI+
Sbjct: 426 LQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIE 485
Query: 407 KVVIALGDXLNAK 445
+ I G L +
Sbjct: 486 EETIKFGKPLGIR 498
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 50.8 bits (116), Expect = 1e-05
Identities = 23/60 (38%), Positives = 41/60 (68%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
A L+ +D++ ++Q+G+GKTA+F I + + + + QALIL PTR LA Q+++ + +G
Sbjct: 35 AALERKDLVVKSQTGSGKTASFGIPLCELANWDENKPQALILTPTRELAVQVKEDITNIG 94
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 50.4 bits (115), Expect = 2e-05
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE----CQALILAPTRXLAQQIQKVVIA 421
L+GRD++A A++G+GKTA F I + +++ IR+ +ALIL+PTR LA Q K +
Sbjct: 71 LEGRDIVAMARTGSGKTACFLIPLFEKL--KIRQAKVGARALILSPTRELALQTLKFIKE 128
Query: 422 LG 427
LG
Sbjct: 129 LG 130
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 50.4 bits (115), Expect = 2e-05
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRXLAQQIQKVVIAL 424
+L G+DV+A A++G+GKTA F I + +++ + +ALIL+PTR LA Q K L
Sbjct: 71 ILDGKDVVAMARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKEL 130
Query: 425 GDXLNAK 445
G K
Sbjct: 131 GKFTKLK 137
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQ---IDTS---IRECQALILAPTRXLAQQIQK 409
A+L G D A A +GTGKTA + + LQ+ +D S +R +AL L PTR LA Q+++
Sbjct: 35 AVLSGTDTYAIAPTGTGKTAAYLLPTLQELSRVDNSAEQVRPVRALFLVPTRELAVQVEE 94
Query: 410 VVIALGDXLNAK 445
+ G LN +
Sbjct: 95 SIAKYGKGLNLR 106
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 50.4 bits (115), Expect = 2e-05
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRXLAQQI 403
L GRDV+ AQ+GTGKTA F + +L + + R C+ LILAPTR L QI
Sbjct: 106 LNGRDVLGIAQTGTGKTAAFGLPLLDALMKAGTKPAPRTCRGLILAPTRELVSQI 160
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 50.0 bits (114), Expect = 2e-05
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISIL---QQI-DTSIRECQALILAPTRXLAQQIQKVVIALG 427
G DVIAQA++GTGKT +F + ++ QQ S R+ L LAPTR LA+QI + A+G
Sbjct: 139 GFDVIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALAPTRELAKQISEYFEAIG 198
Query: 428 DXLNAKC 448
L+ C
Sbjct: 199 PHLSTTC 205
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/49 (44%), Positives = 35/49 (71%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
+G+ VI Q+Q+G+GKT TF + ++ ++ +I E Q +I AP+R LA QI
Sbjct: 38 KGKSVIGQSQTGSGKTHTFLLPLMDKVKPTIDEVQIVITAPSRELANQI 86
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 50.0 bits (114), Expect = 2e-05
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Frame = +2
Query: 221 FCNPATRNN--ALLQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILA 376
+C P + A+L G+D+I +A +GTGKTA F + ++ ++ R +ALILA
Sbjct: 116 YCTPIQEQSLEAVLAGKDLIGKANTGTGKTAVFLVGVMARLLADKKGGLGKRTPRALILA 175
Query: 377 PTRXLAQQIQKVVIALG 427
PTR L QI K LG
Sbjct: 176 PTRELVMQIVKDAKKLG 192
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,978,961
Number of Sequences: 1657284
Number of extensions: 9603250
Number of successful extensions: 30491
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 29089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30200
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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