Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0816
(453 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 4e-24
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 4e-24
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 64 5e-11
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 64 5e-11
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 58 3e-09
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 55 3e-08
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 4e-08
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 54 7e-08
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 52 3e-07
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 51 4e-07
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 49 2e-06
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 48 4e-06
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 48 5e-06
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 47 8e-06
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 42 2e-04
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 7e-04
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 40 0.001
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.027
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_21584| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.34
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 30 0.78
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 30 1.0
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 29 2.4
SB_17830| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 28 4.2
SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08) 28 4.2
SB_31593| Best HMM Match : Ribonuclease_3 (HMM E-Value=6.30024e-42) 27 5.5
SB_30812| Best HMM Match : RVT_1 (HMM E-Value=1.2e-40) 27 5.5
SB_11753| Best HMM Match : RVT_1 (HMM E-Value=0) 27 5.5
SB_24534| Best HMM Match : RVT_1 (HMM E-Value=0) 27 5.5
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 27 5.5
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 27 7.3
SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 107 bits (257), Expect = 4e-24
Identities = 53/78 (67%), Positives = 65/78 (83%), Gaps = 6/78 (7%)
Frame = +2
Query: 236 TRNNALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE------CQALILAPTRXLAQ 397
T+N+ +L RDVIAQAQSGTGKTATF+ISILQ+IDT+ ++ CQAL+LAPTR LAQ
Sbjct: 114 TKNHYVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQ 173
Query: 398 QIQKVVIALGDXLNAKCH 451
QIQKVV+ALGD ++ KCH
Sbjct: 174 QIQKVVLALGDYMHVKCH 191
Score = 85.4 bits (202), Expect = 2e-17
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +3
Query: 117 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCSKD 263
G ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQRAI PC ++
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQE 100
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 107 bits (257), Expect = 4e-24
Identities = 50/67 (74%), Positives = 60/67 (89%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
+L+GRDVIAQAQSGTGKTATFSIS+LQ IDT +RE QAL+L+PTR LA QIQKVV+ALGD
Sbjct: 31 ILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTRELANQIQKVVLALGD 90
Query: 431 XLNAKCH 451
++ +CH
Sbjct: 91 YMSVQCH 97
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 207 GFEKPSAIQQRAIMPCSK 260
GFEKPSAIQQRAI P K
Sbjct: 16 GFEKPSAIQQRAIKPILK 33
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 64.1 bits (149), Expect = 5e-11
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
L GRD++A+A++GTGKTA + + +L++ DT+ QAL+L PTR LA Q ++ I LG
Sbjct: 82 LAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKH 141
Query: 434 LNAK 445
+ A+
Sbjct: 142 MGAQ 145
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+D LK ELL GI+ GF+KPS IQ+ +I
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESI 78
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 64.1 bits (149), Expect = 5e-11
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
L GRD++A+A++GTGKTA + + +L++ DT+ QAL+L PTR LA Q ++ I LG
Sbjct: 82 LAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKH 141
Query: 434 LNAK 445
+ A+
Sbjct: 142 MGAQ 145
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+D LK ELL GI+ GF+KPS IQ+ +I
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESI 78
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 58.0 bits (134), Expect = 3e-09
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
G D+IAQA+SGTGKT FS+ L+ + T Q +IL PTR +A Q++ V+ A+G
Sbjct: 50 GLDLIAQAKSGTGKTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIG 105
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F + L LLRG+ GFEKPS IQ +AI
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAI 44
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 54.8 bits (126), Expect = 3e-08
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLNA 442
+DVI A++G+GKT F++ ILQ + + + ALIL PTR LA QI + ALG +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGV 61
Query: 443 KC 448
KC
Sbjct: 62 KC 63
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 54.4 bits (125), Expect = 4e-08
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRXLAQQIQKVVIAL 424
++ G+DV+A A++G+GKTA F I + +++ T + +ALIL+PTR LA Q QK + L
Sbjct: 315 VMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKEL 374
Query: 425 G 427
G
Sbjct: 375 G 375
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 53.6 bits (123), Expect = 7e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 347 IRECQALILAPTRXLAQQIQKVVIALGDXLNAKCH 451
+RE QAL+L+PTR LA QIQKVV+ALGD ++ +CH
Sbjct: 1 LREPQALVLSPTRELANQIQKVVLALGDYMSVQCH 35
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
++IAQ+QSGTGKTA F +++L ++D + Q + L+PT LA+Q KV A+G
Sbjct: 144 NMIAQSQSGTGKTAAFVLTMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMG 197
Score = 35.5 bits (78), Expect = 0.021
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 150 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
++F+++ L L RG+Y GF KPS IQ+ A+
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETAL 134
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 51.2 bits (117), Expect = 4e-07
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
+LQGRD I A++G+GKTA F++ ILQ++ A++L PTR LA QI LG
Sbjct: 41 ILQGRDCIGCAKTGSGKTAAFALPILQKLCDDPYGIFAVVLTPTRELAFQIADQFKVLGR 100
Query: 431 XLNAK 445
+ K
Sbjct: 101 PIGLK 105
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 9/73 (12%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISIL---------QQIDTSIRECQALILAPTRXLAQQIQ 406
LQ RD+I A++G+GKTA F+I +L ++ + + + ALILAPTR LAQQI+
Sbjct: 136 LQNRDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIE 195
Query: 407 KVVIALGDXLNAK 445
+ ++ G L +
Sbjct: 196 EEILKFGRPLGIR 208
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
G D+I QA+SG GKTA F ++ LQQ++ + L++ TR LA QI K
Sbjct: 84 GMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHK 133
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F D LK ELLR I GFE PS +Q I
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECI 78
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
G D+I QA+SG GKTA F ++ LQQ++ + L++ TR LA QI K
Sbjct: 84 GMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHK 133
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F D LK ELLR I GFE PS +Q I
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECI 78
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 47.6 bits (108), Expect = 5e-06
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQ----QIDTSIRECQALILAPTRXLAQQIQKVVIA 421
L GRDV+ A++G+GKT F I I++ Q TS+ AL+++PTR LA Q +V++
Sbjct: 85 LSGRDVLGAAKTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVK 144
Query: 422 LGD 430
+G+
Sbjct: 145 IGN 147
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 46.8 bits (106), Expect = 8e-06
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Frame = +2
Query: 233 ATRNNALLQGRDVIAQAQSGTGKTATFSISILQQI-DTSI-----RECQALILAPTRXLA 394
A+ N + G DVI QA++GTGKT +F++ +++++ D + R + L++APTR LA
Sbjct: 101 ASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELA 160
Query: 395 QQIQKVVIALGDXLNAKC 448
+Q+ L L C
Sbjct: 161 KQVGNEFENLKSNLEVYC 178
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 43.6 bits (98), Expect = 8e-05
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQALILAPTRXLAQQI 403
++ GRD++A AQ+G+GKTA + + +L Q ++ R AL +APTR LA+QI
Sbjct: 513 VMAGRDLMACAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQI 568
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRXLAQQ 400
L G+DV A A +GTGKTA F + IL+++ T + L++ PTR LA Q
Sbjct: 45 LMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAIRVLVITPTRELAIQ 96
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 41.5 bits (93), Expect = 3e-04
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 9/60 (15%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------DTSIREC---QALILAPTRXLAQQI 403
++ GRDV+A AQ+G+GKTA F + ++ + +S E QA+ +APTR LA QI
Sbjct: 745 VIAGRDVMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQI 804
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 40.3 bits (90), Expect = 7e-04
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRXLAQQIQKVVI 418
L GRD+I A++G+GKTA F + I+ Q + + + LI APTR L QQI
Sbjct: 552 LSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEAR 611
Query: 419 ALGDXLN 439
G N
Sbjct: 612 RFGKAYN 618
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +2
Query: 245 NALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPTRXLAQQI 403
+ ++ GRD+I A++G+GKT +S+ + + T ALIL PTR L QQ+
Sbjct: 104 SCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 132 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
D + +E+F D+NL EL + F+ P+ IQ +++
Sbjct: 66 DCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSL 103
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 37.5 bits (83), Expect = 0.005
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 19/85 (22%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDT--------------SIRECQ-----ALI 370
ALL RD+I A++G+GKT F I I+Q I+ S E Q ALI
Sbjct: 164 ALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALI 223
Query: 371 LAPTRXLAQQIQKVVIALGDXLNAK 445
+APTR LA Q++ ++ + K
Sbjct: 224 MAPTRELALQVKDHLVKAAKYTSVK 248
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 35.1 bits (77), Expect = 0.027
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRXLAQQ 400
LL+GRD++ A++G+GKT F + +L ++ R +I++PTR L+ Q
Sbjct: 606 LLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNGTGVIIISPTRELSLQ 659
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQI 337
RD++A AQ+G+GKTA F I IL +I
Sbjct: 913 RDLMACAQTGSGKTAAFLIPILSRI 937
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+D++L E LL + G++KP+ +Q+ AI
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI 906
>SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 32.7 bits (71), Expect = 0.15
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 27 ERRSEDWPEDSKNGPSKDQGSYD---GPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGI 197
E+ +E+ E +K + D+G GPPG GT D VVE DD K E G
Sbjct: 19 EKTAEEMRELAKKAEACDRGVRAILLGPPGSGKGTQLVSDDLVVELIDDNLTKPECQNGW 78
Query: 198 YAYGFEKPSA 227
GF + A
Sbjct: 79 LLDGFPRTVA 88
>SB_21584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1750
Score = 31.5 bits (68), Expect = 0.34
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = -1
Query: 351 RMLVSICCRIDIEKVAVFPVPDWA*AITSRPWSKALLRVAGLQKVFQNHR-RICLSTILL 175
R+ VS+ C ++ + FP+PD + RPW K +R L VF + + +
Sbjct: 652 RLNVSLSCP-ELSVMLRFPIPDLRPVVERRPWWKQAVRDESLLLVFSAFKFNTVVCSADP 710
Query: 174 *GSCHRRFRQLDP-SRCQVSQGPFPEVHRNYL 82
S RF+Q+D + P P +H + L
Sbjct: 711 AASYELRFQQMDGYYKESAGATPIPVMHSSPL 742
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 30.3 bits (65), Expect = 0.78
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 365 LILAPTRXLAQQIQKVVIALG 427
L+L PTR LAQQ+Q+V ++G
Sbjct: 136 LVLCPTRELAQQVQEVAYSVG 156
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTS 346
+LL+GRDV A G+GK + + I+ QI S
Sbjct: 220 SLLRGRDVAGVAIEGSGKRLAYLLPIIHQITES 252
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 66 GPSKDQG-SYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRG 194
GP +QG S GPPG PG T W+ + N E LRG
Sbjct: 3363 GPKGEQGRSISGPPG-PPGAPGTSWNDSIVNGGLSNSLLESLRG 3405
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 9 NMSYSSERRSEDWPEDSKNGPSKDQGSYDGP 101
+M Y SER P D P+ D GS D P
Sbjct: 1171 SMEYDSERHPYQAPADEMVNPNTDGGSRDNP 1201
>SB_17830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 293 FLTGLER*HRVLGARHYCALLDCRRFFKTIGVYASQQFFFEVH 165
FLT R +++ RH C D F K Y +FFF+VH
Sbjct: 80 FLTFATRLYKLSEPRHIC--WDETHFGKHANFYIKGEFFFDVH 120
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 355
+ G DV+A + SGT K + F ++++ D+ R+
Sbjct: 245 VNGSDVVANSSSGTVKRSLFLPEVMEENDSVFRD 278
>SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 51 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 182
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 71 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 111
>SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 51 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 182
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 54 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 94
>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
Length = 829
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 203 GVYASQQFFFEVHVIEGFDNLIPVGVKC 120
GVY F H + GF N IP +C
Sbjct: 742 GVYLESNVFQNGHALVGFQNTIPASQEC 769
>SB_31593| Best HMM Match : Ribonuclease_3 (HMM E-Value=6.30024e-42)
Length = 618
Score = 27.5 bits (58), Expect = 5.5
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Frame = +3
Query: 9 NMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELL 188
N SYSS + EDW + ++ P +G P P +L T +++E N+ E L
Sbjct: 265 NQSYSSGQLPEDWTK-AQVVPIFKKGVKHDPCNYRPVSLTTVLCKLMEHVIYKNIMEHLE 323
Query: 189 RG--IYA--YGFEKPSAIQQRAIMPCSKDAMLSLKPSQELEKLLLSLYRFYNK 335
++A +GF K + + + ++ +D + +++ L+L + ++K
Sbjct: 324 NNNILFANQHGFRKNHSCETQLLLTV-EDLARNTDNGGQIDMLILDFSKAFDK 375
>SB_30812| Best HMM Match : RVT_1 (HMM E-Value=1.2e-40)
Length = 325
Score = 27.5 bits (58), Expect = 5.5
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Frame = +3
Query: 9 NMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELL 188
N SYSS + EDW + ++ P +G P P +L T +++E N+ E L
Sbjct: 83 NQSYSSGQLPEDWTK-AQVVPIFKKGVKHDPCNYRPVSLTTVLCKLMEHVIYKNIMEHLE 141
Query: 189 RG--IYA--YGFEKPSAIQQRAIMPCSKDAMLSLKPSQELEKLLLSLYRFYNK 335
++A +GF K + + + ++ +D + +++ L+L + ++K
Sbjct: 142 NNNILFANQHGFRKNHSCETQLLLTV-EDLARNTDNGGQIDMLILDFSKAFDK 193
>SB_11753| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 393
Score = 27.5 bits (58), Expect = 5.5
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Frame = +3
Query: 9 NMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELL 188
N SYSS + EDW + ++ P +G P P +L T +++E N+ E L
Sbjct: 83 NQSYSSGQLPEDWTK-AQVVPIFKKGVKHDPCNYRPVSLTTVLCKLMEHVIYKNIMEHLE 141
Query: 189 RG--IYA--YGFEKPSAIQQRAIMPCSKDAMLSLKPSQELEKLLLSLYRFYNK 335
++A +GF K + + + ++ +D + +++ L+L + ++K
Sbjct: 142 NNNILFANQHGFRKNHSCETQLLLTV-EDLARNTDNGGQIDMLILDFSKAFDK 193
>SB_24534| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 423
Score = 27.5 bits (58), Expect = 5.5
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Frame = +3
Query: 9 NMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELL 188
N SYSS + EDW + ++ P +G P P +L T +++E N+ E L
Sbjct: 83 NQSYSSGQLPEDWTK-AQVVPIFKKGVKHDPCNYRPVSLTTVLCKLMEHVIYKNIMEHLE 141
Query: 189 RG--IYA--YGFEKPSAIQQRAIMPCSKDAMLSLKPSQELEKLLLSLYRFYNK 335
++A +GF K + + + ++ +D + +++ L+L + ++K
Sbjct: 142 NNNILFANQHGFRKNHSCETQLLLTV-EDLARNTDNGGQIDMLILDFSKAFDK 193
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKT 304
++ GRDV+A AQ+G+GKT
Sbjct: 168 VIAGRDVMACAQTGSGKT 185
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQ---------IDTSIRECQALILAPTRXLAQQI 403
++ VI AQ+G+GKT + ++ + I ++ +A I+ P R LA QI
Sbjct: 412 IIHRHHVICAAQTGSGKTLAYLAPLVHRLREDEERHGILARLKRPRACIVVPARELATQI 471
Query: 404 QKVVIAL 424
K +L
Sbjct: 472 LKTAKSL 478
>SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 7/37 (18%)
Frame = +3
Query: 63 NGPSKDQGSYDGPPGMDPGTLD-------TDWDQVVE 152
NGP+ D YD PP P T D T+WD ++
Sbjct: 340 NGPTSDNTDYDSPPRATP-TYDAPTRSTRTNWDPTID 375
>SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 448 AFSIQXITKXYHHLLNLLGQLSCGSQDQSLTFTNACID 335
A ++Q +TK Y HL+N+ G +++ T C D
Sbjct: 201 AHALQTLTKAYRHLMNVTGN---RDKEEKANATEQCAD 235
>SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4085
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 51 EDSKNGPSKDQGSYDGPPGMDP 116
+DSK P D+ PPG DP
Sbjct: 4012 KDSKTNPKSDKTQIGQPPGADP 4033
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,486,863
Number of Sequences: 59808
Number of extensions: 305297
Number of successful extensions: 1590
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1585
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 908427626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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