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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0816
         (453 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039720-12|AAB96704.1|  399|Caenorhabditis elegans Hypothetical...   109   1e-24
AC024844-2|AAK29954.2|  399|Caenorhabditis elegans Hypothetical ...   109   1e-24
Z12116-1|CAA78102.1|  402|Caenorhabditis elegans protein ( C.ele...    89   1e-18
U13876-3|AAA21170.1|  402|Caenorhabditis elegans Initiation fact...    89   1e-18
AC006661-5|AAF39890.2|  488|Caenorhabditis elegans Hypothetical ...    60   7e-10
AC006661-4|ABB88208.1|  561|Caenorhabditis elegans Hypothetical ...    60   7e-10
AC006605-1|AAK85443.1|  430|Caenorhabditis elegans Conserved ger...    58   4e-09
Z50071-3|CAA90407.1|  613|Caenorhabditis elegans Hypothetical pr...    57   5e-09
Z50071-2|CAA90406.1|  638|Caenorhabditis elegans Hypothetical pr...    57   5e-09
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr...    57   5e-09
U13876-12|AAA21169.1|  363|Caenorhabditis elegans Hypothetical p...    57   5e-09
EU051652-1|ABS85191.1|  973|Caenorhabditis elegans MEL-46 protein.     53   1e-07
CU457744-1|CAM36366.2|  973|Caenorhabditis elegans Hypothetical ...    53   1e-07
AC024876-4|AAU05555.1|  825|Caenorhabditis elegans Hypothetical ...    53   1e-07
AC024876-3|AAU05556.1|  871|Caenorhabditis elegans Hypothetical ...    53   1e-07
Z29115-1|CAA82362.1|  489|Caenorhabditis elegans Hypothetical pr...    52   3e-07
Z54327-7|CAD57690.1|  268|Caenorhabditis elegans Hypothetical pr...    47   6e-06
Z54327-6|CAA91120.1|  425|Caenorhabditis elegans Hypothetical pr...    47   6e-06
U08102-1|AAB65852.1|  417|Caenorhabditis elegans putative RNA he...    47   6e-06
U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical pr...    46   1e-05
Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    44   5e-05
Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical pr...    42   2e-04
AC025726-23|AAK73934.1|  763|Caenorhabditis elegans Hypothetical...    42   3e-04
AL034488-3|CAA22456.1|  504|Caenorhabditis elegans Hypothetical ...    41   5e-04
AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical ...    40   6e-04
Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical pr...    40   8e-04
U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical pr...    39   0.001
U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical pr...    39   0.001
U62772-1|AAB04136.1|  763|Caenorhabditis elegans RNA helicase pr...    39   0.002
L19948-1|AAC27384.1|  763|Caenorhabditis elegans RNA helicase pr...    39   0.002
AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical ...    39   0.002
AF000197-1|AAB52901.2|  763|Caenorhabditis elegans Germ-line hel...    39   0.002
AC006665-5|AAF39907.1|  630|Caenorhabditis elegans Hypothetical ...    38   0.003
Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical pr...    37   0.006
AF079509-1|AAC28388.1|  720|Caenorhabditis elegans germline RNA ...    37   0.008
AF003145-4|AAB57719.1|  720|Caenorhabditis elegans Germ-line hel...    37   0.008
AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and bel...    36   0.010
AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and bel...    36   0.010
AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and bel...    36   0.010
U60449-1|AAB03510.1|  974|Caenorhabditis elegans GLH-2 protein.        36   0.014
U60194-1|AAB03337.1|  974|Caenorhabditis elegans RNA helicase GL...    36   0.014
AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical ...    36   0.014
AC006625-11|AAK68269.1|  974|Caenorhabditis elegans Germ-line he...    36   0.014
L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical pr...    33   0.097
AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical...    33   0.13 
AC024830-10|AAF59610.3|  728|Caenorhabditis elegans Hypothetical...    31   0.30 
AC006748-6|AAF60516.1|  582|Caenorhabditis elegans Hypothetical ...    31   0.30 
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ...    31   0.52 
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel...    31   0.52 
AF025451-3|AAB71200.2|  634|Caenorhabditis elegans Hypothetical ...    30   0.69 
U80437-18|AAB37629.1|  518|Caenorhabditis elegans Cell division ...    29   2.1  
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ...    29   2.1  
AC006748-5|AAX55685.1|  471|Caenorhabditis elegans Hypothetical ...    29   2.1  
U00033-1|AAC48292.3|  731|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z48544-1|CAA88435.1|  473|Caenorhabditis elegans Hypothetical pr...    27   4.8  
CU457741-9|CAM36350.2|  252|Caenorhabditis elegans Hypothetical ...    27   4.8  
Z70035-2|CAA93862.1|  440|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z48584-8|CAK55179.1|  435|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z48584-7|CAH04712.1|  448|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z48584-5|CAD57717.1|  501|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z48584-4|CAD57716.1|  536|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z48584-3|CAD57715.1|  524|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z48584-2|CAA88477.2|  481|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U21308-11|AAB93312.3|  265|Caenorhabditis elegans Roller: helica...    27   8.4  
U21308-10|AAN65281.1|  329|Caenorhabditis elegans Roller: helica...    27   8.4  
M25477-1|AAA27991.1|  329|Caenorhabditis elegans collagen protein.     27   8.4  
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.      27   8.4  

>AF039720-12|AAB96704.1|  399|Caenorhabditis elegans Hypothetical
           protein F33D11.10 protein.
          Length = 399

 Score =  109 bits (261), Expect = 1e-24
 Identities = 51/68 (75%), Positives = 60/68 (88%)
 Frame = +2

Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
           A+L+ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTR LA QIQKVV+ALG
Sbjct: 59  AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118

Query: 428 DXLNAKCH 451
           D +N +CH
Sbjct: 119 DYMNVQCH 126



 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +3

Query: 144 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+
Sbjct: 24  VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV 57


>AC024844-2|AAK29954.2|  399|Caenorhabditis elegans Hypothetical
           protein Y65B4A.6 protein.
          Length = 399

 Score =  109 bits (261), Expect = 1e-24
 Identities = 51/68 (75%), Positives = 60/68 (88%)
 Frame = +2

Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALG 427
           A+L+ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTR LA QIQKVV+ALG
Sbjct: 59  AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118

Query: 428 DXLNAKCH 451
           D +N +CH
Sbjct: 119 DYMNVQCH 126



 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +3

Query: 144 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           ++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 24  IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI 57


>Z12116-1|CAA78102.1|  402|Caenorhabditis elegans protein (
           C.elegans mRNA for eIF-4A homologue. ).
          Length = 402

 Score = 89.0 bits (211), Expect = 1e-18
 Identities = 44/60 (73%), Positives = 51/60 (85%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLN 439
           G+DVIAQAQSGTGKTATFS+SILQ+ID      QAL++APTR LAQQIQKV+ ALG+ LN
Sbjct: 66  GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125



 Score = 79.8 bits (188), Expect = 9e-16
 Identities = 34/47 (72%), Positives = 43/47 (91%)
 Frame = +3

Query: 117 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCS 257
           G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC+
Sbjct: 18  GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCT 64


>U13876-3|AAA21170.1|  402|Caenorhabditis elegans Initiation factor
           protein 1, isoforma protein.
          Length = 402

 Score = 89.0 bits (211), Expect = 1e-18
 Identities = 44/60 (73%), Positives = 51/60 (85%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLN 439
           G+DVIAQAQSGTGKTATFS+SILQ+ID      QAL++APTR LAQQIQKV+ ALG+ LN
Sbjct: 66  GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125



 Score = 79.8 bits (188), Expect = 9e-16
 Identities = 34/47 (72%), Positives = 43/47 (91%)
 Frame = +3

Query: 117 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCS 257
           G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC+
Sbjct: 18  GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCT 64


>AC006661-5|AAF39890.2|  488|Caenorhabditis elegans Hypothetical
           protein H20J04.4a protein.
          Length = 488

 Score = 60.1 bits (139), Expect = 7e-10
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
           +L+G D++  A++GTGKT  F+I ILQ++        ALIL PTR LA QI +   ALG 
Sbjct: 123 ILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGK 182

Query: 431 XLNAKC 448
            +  KC
Sbjct: 183 PITLKC 188


>AC006661-4|ABB88208.1|  561|Caenorhabditis elegans Hypothetical
           protein H20J04.4b protein.
          Length = 561

 Score = 60.1 bits (139), Expect = 7e-10
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGD 430
           +L+G D++  A++GTGKT  F+I ILQ++        ALIL PTR LA QI +   ALG 
Sbjct: 123 ILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGK 182

Query: 431 XLNAKC 448
            +  KC
Sbjct: 183 PITLKC 188


>AC006605-1|AAK85443.1|  430|Caenorhabditis elegans Conserved
           germline helicase protein1 protein.
          Length = 430

 Score = 57.6 bits (133), Expect = 4e-09
 Identities = 22/64 (34%), Positives = 43/64 (67%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
           L G+D++A+A++GTGKT  + I ++++I  +++  QA+++ PTR LA Q  ++ + L   
Sbjct: 78  LTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKH 137

Query: 434 LNAK 445
           +  K
Sbjct: 138 IQLK 141



 Score = 33.9 bits (74), Expect = 0.056
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +3

Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           F+D  L  +LL GI+  G+EKPS IQ+ +I
Sbjct: 45  FEDFCLGRDLLMGIFEKGWEKPSPIQEASI 74


>Z50071-3|CAA90407.1|  613|Caenorhabditis elegans Hypothetical
           protein T07D4.4c protein.
          Length = 613

 Score = 57.2 bits (132), Expect = 5e-09
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = +2

Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXL-NA 442
           ++IAQAQSGTGKTA F +++L +ID ++   Q + LAPT  LA+QI +VV  +G  + N 
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309

Query: 443 KCH 451
           K H
Sbjct: 310 KIH 312


>Z50071-2|CAA90406.1|  638|Caenorhabditis elegans Hypothetical
           protein T07D4.4b protein.
          Length = 638

 Score = 57.2 bits (132), Expect = 5e-09
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = +2

Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXL-NA 442
           ++IAQAQSGTGKTA F +++L +ID ++   Q + LAPT  LA+QI +VV  +G  + N 
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334

Query: 443 KCH 451
           K H
Sbjct: 335 KIH 337


>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
           protein T07D4.4a protein.
          Length = 1022

 Score = 57.2 bits (132), Expect = 5e-09
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = +2

Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXL-NA 442
           ++IAQAQSGTGKTA F +++L +ID ++   Q + LAPT  LA+QI +VV  +G  + N 
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718

Query: 443 KCH 451
           K H
Sbjct: 719 KIH 721


>U13876-12|AAA21169.1|  363|Caenorhabditis elegans Hypothetical
           protein F57B9.3 protein.
          Length = 363

 Score = 57.2 bits (132), Expect = 5e-09
 Identities = 26/51 (50%), Positives = 36/51 (70%)
 Frame = +3

Query: 165 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCSKDAMLSLKPSQELEKLLLSL 317
           M LKEELLRGIY +GFEKPSAIQ+ A+ PC+    ++++      K ++SL
Sbjct: 1   MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51



 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 26/60 (43%), Positives = 37/60 (61%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDXLN 439
           G+DV  Q+Q+G+GKT    I ILQ ID      Q ++LAP R +AQ+  + + +LG  LN
Sbjct: 33  GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLN 92


>EU051652-1|ABS85191.1|  973|Caenorhabditis elegans MEL-46 protein.
          Length = 973

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 23/54 (42%), Positives = 37/54 (68%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
           L GRD++ QA+SGTGKT  FS+  ++ +D+     Q +I+ PTR ++ QI++ V
Sbjct: 57  LLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110


>CU457744-1|CAM36366.2|  973|Caenorhabditis elegans Hypothetical
           protein T06A10.1 protein.
          Length = 973

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 23/54 (42%), Positives = 37/54 (68%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVV 415
           L GRD++ QA+SGTGKT  FS+  ++ +D+     Q +I+ PTR ++ QI++ V
Sbjct: 57  LLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110


>AC024876-4|AAU05555.1|  825|Caenorhabditis elegans Hypothetical
           protein Y94H6A.5a protein.
          Length = 825

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRXLAQQIQKVVIALG 427
           ++ G+DV+A +++G+GKTA F I +LQ++        +AL+++PTR LA Q  KVV  LG
Sbjct: 58  IMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELG 117

Query: 428 DXLNAKC 448
                +C
Sbjct: 118 RFTGLRC 124


>AC024876-3|AAU05556.1|  871|Caenorhabditis elegans Hypothetical
           protein Y94H6A.5b protein.
          Length = 871

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRXLAQQIQKVVIALG 427
           ++ G+DV+A +++G+GKTA F I +LQ++        +AL+++PTR LA Q  KVV  LG
Sbjct: 58  IMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELG 117

Query: 428 DXLNAKC 448
                +C
Sbjct: 118 RFTGLRC 124


>Z29115-1|CAA82362.1|  489|Caenorhabditis elegans Hypothetical
           protein T26G10.1 protein.
          Length = 489

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 27/61 (44%), Positives = 38/61 (62%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQKVVIALGDX 433
           LQG+DVI  A++G+GKT  F+I +LQ +    +    L+L PTR LA QI +   ALG  
Sbjct: 79  LQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSG 138

Query: 434 L 436
           +
Sbjct: 139 I 139


>Z54327-7|CAD57690.1|  268|Caenorhabditis elegans Hypothetical
           protein C26D10.2b protein.
          Length = 268

 Score = 47.2 bits (107), Expect = 6e-06
 Identities = 24/50 (48%), Positives = 31/50 (62%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
           G DV+ QA+SG GKTA F I+ LQQ++    E   + +  TR LA QI K
Sbjct: 78  GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 127


>Z54327-6|CAA91120.1|  425|Caenorhabditis elegans Hypothetical
           protein C26D10.2a protein.
          Length = 425

 Score = 47.2 bits (107), Expect = 6e-06
 Identities = 24/50 (48%), Positives = 31/50 (62%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
           G DV+ QA+SG GKTA F I+ LQQ++    E   + +  TR LA QI K
Sbjct: 78  GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 127


>U08102-1|AAB65852.1|  417|Caenorhabditis elegans putative RNA
           helicase protein.
          Length = 417

 Score = 47.2 bits (107), Expect = 6e-06
 Identities = 24/50 (48%), Positives = 31/50 (62%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQIQK 409
           G DV+ QA+SG GKTA F I+ LQQ++    E   + +  TR LA QI K
Sbjct: 77  GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 126


>U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical
           protein F01F1.7 protein.
          Length = 730

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRXLAQQI 403
           LQ RDVI  A++G+GKTA F + +L  I TS+ + +          A+I+APTR LAQQI
Sbjct: 336 LQNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQI 394

Query: 404 QKVVIALGDXLNAK 445
           ++     G  L  K
Sbjct: 395 EEETNKFGKLLGIK 408


>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 44.0 bits (99), Expect = 5e-05
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPTRXLAQQIQKVVI 418
           + GRD+I+ A++G+GKT  F +  L  I       +      L+L PTR LAQQ+Q+V I
Sbjct: 164 MSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSI 223

Query: 419 ALGDXLNAK 445
                L  K
Sbjct: 224 DFCHSLGLK 232


>Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical
           protein F58G11.2 protein.
          Length = 960

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 10/65 (15%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRXLAQQ 400
           +L G DV+ QA++  GKTA F + I+ +I     +T  +  Q     ALILAPTR LA Q
Sbjct: 415 VLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQ 474

Query: 401 IQKVV 415
           I + +
Sbjct: 475 IHEAL 479


>AC025726-23|AAK73934.1|  763|Caenorhabditis elegans Hypothetical
           protein Y71G12B.8 protein.
          Length = 763

 Score = 41.5 bits (93), Expect = 3e-04
 Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRXLAQQIQKV 412
           L G+D+ A A +GTGKTA F + IL+++    +   C + L+L PTR LA Q+ +V
Sbjct: 183 LTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQV 238



 Score = 30.7 bits (66), Expect = 0.52
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +3

Query: 51  EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 224
           E  K+G SK  Q + D    +  G +LDT    V  +F+ MNL  ++L+     G+  P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172

Query: 225 AIQQRAI 245
            IQQ  I
Sbjct: 173 PIQQACI 179


>AL034488-3|CAA22456.1|  504|Caenorhabditis elegans Hypothetical
           protein Y54G11A.3 protein.
          Length = 504

 Score = 40.7 bits (91), Expect = 5e-04
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRXLAQ 397
           LL G+D I  +Q+G+GKT  F +  L  ID  + + +            L+L+PTR LAQ
Sbjct: 118 LLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQ 177

Query: 398 QIQ 406
           QI+
Sbjct: 178 QIE 180


>AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical
           protein F53H1.1 protein.
          Length = 970

 Score = 40.3 bits (90), Expect = 6e-04
 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
 Frame = +2

Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRXLAQQIQK 409
           +++ GRDVI  A++G+GKT  F + + + I     + E     A+ILAPTR LA Q  K
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYK 395


>Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical
           protein ZK512.2 protein.
          Length = 578

 Score = 39.9 bits (89), Expect = 8e-04
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTS---IRECQALILAPTRXLAQQIQKVVIA 421
           LL   DV+ ++ +G+GKT  F + +++ I  +     +  ALIL+P+R L  QI  V+  
Sbjct: 43  LLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQP 102

Query: 422 LGDXLN 439
             + LN
Sbjct: 103 FAEKLN 108


>U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical
           protein F55F8.2b protein.
          Length = 579

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 11/70 (15%)
 Frame = +2

Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRXLA 394
           A+   +DV+  A++G+GKT  F I ++ ++            T +R  +ALI+APTR L 
Sbjct: 22  AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 81

Query: 395 QQIQKVVIAL 424
            QI K + AL
Sbjct: 82  IQIMKHINAL 91


>U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical
           protein F55F8.2a protein.
          Length = 746

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 11/70 (15%)
 Frame = +2

Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRXLA 394
           A+   +DV+  A++G+GKT  F I ++ ++            T +R  +ALI+APTR L 
Sbjct: 189 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 248

Query: 395 QQIQKVVIAL 424
            QI K + AL
Sbjct: 249 IQIMKHINAL 258


>U62772-1|AAB04136.1|  763|Caenorhabditis elegans RNA helicase
           protein.
          Length = 763

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 9/58 (15%)
 Frame = +2

Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRXLAQQI 403
           QG D++A AQ+G+GKTA F + I+ ++  D ++          + +IL PTR LA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434


>L19948-1|AAC27384.1|  763|Caenorhabditis elegans RNA helicase
           protein.
          Length = 763

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 9/58 (15%)
 Frame = +2

Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRXLAQQI 403
           QG D++A AQ+G+GKTA F + I+ ++  D ++          + +IL PTR LA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434


>AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical
           protein B0511.6 protein.
          Length = 544

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRXLAQQIQKVVI 418
           LL+G+DV+A A++G+GKT  F   +I +L +++         +I++PTR L+ Q   V+ 
Sbjct: 102 LLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLS 161

Query: 419 ALGDXLN 439
            L +  N
Sbjct: 162 ELLEGSN 168


>AF000197-1|AAB52901.2|  763|Caenorhabditis elegans Germ-line
           helicase protein 1 protein.
          Length = 763

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 9/58 (15%)
 Frame = +2

Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRXLAQQI 403
           QG D++A AQ+G+GKTA F + I+ ++  D ++          + +IL PTR LA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434


>AC006665-5|AAF39907.1|  630|Caenorhabditis elegans Hypothetical
           protein H27M09.1 protein.
          Length = 630

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRXLAQQIQK 409
           L GRD+I  A +G+GKT TF + ++     Q++       +    LI+ P+R LA+QI  
Sbjct: 225 LSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFD 284

Query: 410 VVIALGDXL 436
           ++I + D L
Sbjct: 285 LIIEMFDAL 293


>Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical
           protein C46F11.4 protein.
          Length = 811

 Score = 37.1 bits (82), Expect = 0.006
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRXLAQQI 403
           L GRDV+  A++G+GKTA +     + I+ Q D    E   A+I+ PTR LA Q+
Sbjct: 300 LSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354


>AF079509-1|AAC28388.1|  720|Caenorhabditis elegans germline RNA
           helicase-3 protein.
          Length = 720

 Score = 36.7 bits (81), Expect = 0.008
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 9/57 (15%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRXLAQQI 403
           G+D++A AQ+G+GKTA F + I+ ++    D +      C  + +IL PTR LA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391


>AF003145-4|AAB57719.1|  720|Caenorhabditis elegans Germ-line
           helicase protein 3 protein.
          Length = 720

 Score = 36.7 bits (81), Expect = 0.008
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 9/57 (15%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRXLAQQI 403
           G+D++A AQ+G+GKTA F + I+ ++    D +      C  + +IL PTR LA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391


>AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform c protein.
          Length = 660

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 15/68 (22%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTR 385
           LL  RD+++ AQ+G+GKTA F + I+Q I             T+ R      AL+L+PTR
Sbjct: 173 LLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTR 232

Query: 386 XLAQQIQK 409
            LA QI K
Sbjct: 233 ELAIQIHK 240


>AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform b protein.
          Length = 644

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 15/68 (22%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTR 385
           LL  RD+++ AQ+G+GKTA F + I+Q I             T+ R      AL+L+PTR
Sbjct: 157 LLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTR 216

Query: 386 XLAQQIQK 409
            LA QI K
Sbjct: 217 ELAIQIHK 224


>AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform a protein.
          Length = 641

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 15/68 (22%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTR 385
           LL  RD+++ AQ+G+GKTA F + I+Q I             T+ R      AL+L+PTR
Sbjct: 154 LLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTR 213

Query: 386 XLAQQIQK 409
            LA QI K
Sbjct: 214 ELAIQIHK 221


>U60449-1|AAB03510.1|  974|Caenorhabditis elegans GLH-2 protein.
          Length = 974

 Score = 35.9 bits (79), Expect = 0.014
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
 Frame = +2

Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRXLAQQI 403
           QG D++A AQ+G+GKTA F + I+ ++  +  +          + +IL PTR L  QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645


>U60194-1|AAB03337.1|  974|Caenorhabditis elegans RNA helicase GLH-2
           protein.
          Length = 974

 Score = 35.9 bits (79), Expect = 0.014
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
 Frame = +2

Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRXLAQQI 403
           QG D++A AQ+G+GKTA F + I+ ++  +  +          + +IL PTR L  QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645


>AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical
           protein Y23H5B.6 protein.
          Length = 732

 Score = 35.9 bits (79), Expect = 0.014
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE----CQALILAPTRXLAQQIQKVVIA 421
           L G DV+  A++G+GKT    I +L+ +  +         ALI++PTR LA Q    + A
Sbjct: 111 LTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINA 170

Query: 422 LGDXLNAKC 448
           +G      C
Sbjct: 171 VGAHHGFSC 179


>AC006625-11|AAK68269.1|  974|Caenorhabditis elegans Germ-line
           helicase protein 2 protein.
          Length = 974

 Score = 35.9 bits (79), Expect = 0.014
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
 Frame = +2

Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRXLAQQI 403
           QG D++A AQ+G+GKTA F + I+ ++  +  +          + +IL PTR L  QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645


>L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical
           protein ZK686.2 protein.
          Length = 593

 Score = 33.1 bits (72), Expect = 0.097
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRXLAQQI 403
           L+ RDV   A +G+GKT  + + +L  + +   +  QA+IL P + L  QI
Sbjct: 154 LRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQI 204


>AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.19 protein.
          Length = 643

 Score = 32.7 bits (71), Expect = 0.13
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 16/68 (23%)
 Frame = +2

Query: 248 ALLQGRDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAP 379
           AL  GRD+++ AQ+G+GKTA F +    +ILQ     +  S+     R+ Q   AL+L+P
Sbjct: 199 ALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSP 258

Query: 380 TRXLAQQI 403
           TR L+ QI
Sbjct: 259 TRELSLQI 266


>AC024830-10|AAF59610.3|  728|Caenorhabditis elegans Hypothetical
           protein Y55F3BR.1 protein.
          Length = 728

 Score = 31.5 bits (68), Expect = 0.30
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQ 331
           A+L G D +  A++G+GKT  FS+ I Q
Sbjct: 35  AILGGADALIAAETGSGKTGAFSLPIAQ 62


>AC006748-6|AAF60516.1|  582|Caenorhabditis elegans Hypothetical
           protein Y39A3B.5a protein.
          Length = 582

 Score = 31.5 bits (68), Expect = 0.30
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 111 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 13
           P P +  +  D     FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370


>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
           helicase-4 protein.
          Length = 1156

 Score = 30.7 bits (66), Expect = 0.52
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRXLAQQ 400
           ++ G DV+A A +G+GKT  F I  + ++      D  + +     + LI+APTR L  Q
Sbjct: 770 IMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829

Query: 401 IQKVVIALGDXLNAKC 448
                  L      KC
Sbjct: 830 TFTTARQLTYETGLKC 845


>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
           helicase protein 4 protein.
          Length = 1156

 Score = 30.7 bits (66), Expect = 0.52
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRXLAQQ 400
           ++ G DV+A A +G+GKT  F I  + ++      D  + +     + LI+APTR L  Q
Sbjct: 770 IMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829

Query: 401 IQKVVIALGDXLNAKC 448
                  L      KC
Sbjct: 830 TFTTARQLTYETGLKC 845


>AF025451-3|AAB71200.2|  634|Caenorhabditis elegans Hypothetical
           protein C24H12.4a protein.
          Length = 634

 Score = 30.3 bits (65), Expect = 0.69
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 114 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           P   + D++   +TF D  L E +L+ I   G+EK + +Q+  I
Sbjct: 77  PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120


>U80437-18|AAB37629.1|  518|Caenorhabditis elegans Cell division
           cycle related protein6 protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 269 VIAQAQSGTGKTATFSISILQQIDTSIREC 358
           +    Q GTGKTAT ++ +L+ +  S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226


>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
            protein Y46G5A.4 protein.
          Length = 2145

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 13/46 (28%), Positives = 28/46 (60%)
 Frame = +2

Query: 266  DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRXLAQQI 403
            +VI  A +G+GKTA   +++L+  + +  E +A+ + P   +A ++
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383


>AC006748-5|AAX55685.1|  471|Caenorhabditis elegans Hypothetical
           protein Y39A3B.5c protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 81  DPSMAHFWNPLANLLTFFQTNKT 13
           D     FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259


>U00033-1|AAC48292.3|  731|Caenorhabditis elegans Hypothetical
           protein F37C12.7 protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = +3

Query: 24  SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 164
           SER   +W +D ++GP ++ QG + +  PG D  T+D  W + VE +D+
Sbjct: 63  SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108


>Z48544-1|CAA88435.1|  473|Caenorhabditis elegans Hypothetical
           protein ZK945.1 protein.
          Length = 473

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 380 WEPGSKLDIHECLYRFVVESI*RK 309
           WEPG+K   H   Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233


>CU457741-9|CAM36350.2|  252|Caenorhabditis elegans Hypothetical
           protein C42C1.9 protein.
          Length = 252

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -1

Query: 318 IEKVAVFPVPDWA*AITSRPWSKALLRVAGLQKVFQNHRRICLSTILL 175
           +++   FP+PDW  A+  R  + ALL++   Q +   H  + L  I L
Sbjct: 102 LDEYGKFPLPDWMTAVIVRDIANALLQLHSNQVL---HGAVTLENIFL 146


>Z70035-2|CAA93862.1|  440|Caenorhabditis elegans Hypothetical
           protein R09D1.2 protein.
          Length = 440

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 232 SNAQ*CLAPRTRCYRSSPVRNWKNCYFLYIDSTTNRYKHS*MSSFD 369
           +N Q  + PRT  +R++ +RN +     Y+D ++  YK   M+S+D
Sbjct: 322 NNVQEAVDPRTEVFRNAEIRNNRADGVPYMDRSSADYK---MASWD 364


>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
            T14G8.1 protein.
          Length = 1787

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +3

Query: 12   MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 143
            ++Y+SE   +DW   +     +D GS  G    +    D D+++
Sbjct: 1243 VNYASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286


>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
            T14G8.1 protein.
          Length = 1787

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +3

Query: 12   MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 143
            ++Y+SE   +DW   +     +D GS  G    +    D D+++
Sbjct: 1243 VNYASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286


>Z48584-8|CAK55179.1|  435|Caenorhabditis elegans Hypothetical
           protein ZK1321.2f protein.
          Length = 435

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 247 IIARCWIAEGFSKP*AYMPLNNSSLR 170
           ++   WIAEG+ KP   M  NN + R
Sbjct: 133 LLEEFWIAEGYEKPKEVMMPNNKTQR 158


>Z48584-7|CAH04712.1|  448|Caenorhabditis elegans Hypothetical
           protein ZK1321.2e protein.
          Length = 448

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 247 IIARCWIAEGFSKP*AYMPLNNSSLR 170
           ++   WIAEG+ KP   M  NN + R
Sbjct: 146 LLEEFWIAEGYEKPKEVMMPNNKTQR 171


>Z48584-5|CAD57717.1|  501|Caenorhabditis elegans Hypothetical
           protein ZK1321.2d protein.
          Length = 501

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 247 IIARCWIAEGFSKP*AYMPLNNSSLR 170
           ++   WIAEG+ KP   M  NN + R
Sbjct: 199 LLEEFWIAEGYEKPKEVMMPNNKTQR 224


>Z48584-4|CAD57716.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK1321.2c protein.
          Length = 536

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 247 IIARCWIAEGFSKP*AYMPLNNSSLR 170
           ++   WIAEG+ KP   M  NN + R
Sbjct: 234 LLEEFWIAEGYEKPKEVMMPNNKTQR 259


>Z48584-3|CAD57715.1|  524|Caenorhabditis elegans Hypothetical
           protein ZK1321.2b protein.
          Length = 524

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 247 IIARCWIAEGFSKP*AYMPLNNSSLR 170
           ++   WIAEG+ KP   M  NN + R
Sbjct: 222 LLEEFWIAEGYEKPKEVMMPNNKTQR 247


>Z48584-2|CAA88477.2|  481|Caenorhabditis elegans Hypothetical
           protein ZK1321.2a protein.
          Length = 481

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 247 IIARCWIAEGFSKP*AYMPLNNSSLR 170
           ++   WIAEG+ KP   M  NN + R
Sbjct: 179 LLEEFWIAEGYEKPKEVMMPNNKTQR 204


>U21308-11|AAB93312.3|  265|Caenorhabditis elegans Roller: helically
           twisted, animalsroll when moving protein 8, isoform b
           protein.
          Length = 265

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +3

Query: 48  PEDSKNGPSKDQGSYDGPPGMDPGTLDT 131
           P   K  P  D  SY GPPG  PG   T
Sbjct: 202 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 228


>U21308-10|AAN65281.1|  329|Caenorhabditis elegans Roller: helically
           twisted, animalsroll when moving protein 8, isoform a
           protein.
          Length = 329

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +3

Query: 48  PEDSKNGPSKDQGSYDGPPGMDPGTLDT 131
           P   K  P  D  SY GPPG  PG   T
Sbjct: 266 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 292


>M25477-1|AAA27991.1|  329|Caenorhabditis elegans collagen protein.
          Length = 329

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +3

Query: 48  PEDSKNGPSKDQGSYDGPPGMDPGTLDT 131
           P   K  P  D  SY GPPG  PG   T
Sbjct: 266 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 292


>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
          Length = 1787

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +3

Query: 12   MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 143
            ++Y+SE   +DW   +     +D GS  G    +    D D+++
Sbjct: 1243 VNYASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,692,625
Number of Sequences: 27780
Number of extensions: 226747
Number of successful extensions: 770
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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