BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0815 (751 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 140 2e-34 SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 134 1e-32 SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 86 4e-18 SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 67 2e-12 SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 62 8e-11 SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 60 3e-10 SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 60 3e-10 SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 59 6e-10 SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 57 2e-09 SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 54 2e-08 SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 54 2e-08 SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 53 4e-08 SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 50 3e-07 SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 50 4e-07 SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 48 1e-06 SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 48 1e-06 SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 48 2e-06 SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 46 6e-06 SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 46 6e-06 SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 42 7e-05 SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 42 1e-04 SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 39 7e-04 SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 36 0.006 SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 36 0.006 SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharo... 28 1.2 SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 28 1.6 SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p... 27 2.2 SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe... 27 2.9 SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 27 2.9 SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 2.9 SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual 27 3.8 SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 27 3.8 SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein P... 26 5.0 SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual 26 6.6 SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 26 6.6 SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 26 6.6 SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces p... 26 6.6 SPCC16A11.07 |coq10||ubiquinone binding protein Coq10|Schizosacc... 25 8.7 SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc... 25 8.7 >SPAC1006.07 |||translation initiation factor eIF4A|Schizosaccharomyces pombe|chr 1|||Manual Length = 392 Score = 140 bits (339), Expect = 2e-34 Identities = 65/86 (75%), Positives = 79/86 (91%) Frame = +2 Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430 +L RDV+AQAQSGTGKTATFSIS+LQ+IDTS+++CQALILAPTRELAQQIQKVV+ALGD Sbjct: 53 ILGERDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGD 112 Query: 431 HLNAKCHACIGGTNVREDIRQLESGV 508 +N +CHACIGGT VR+D+ L++GV Sbjct: 113 LMNVECHACIGGTLVRDDMAALQAGV 138 Score = 89.4 bits (212), Expect = 5e-19 Identities = 41/64 (64%), Positives = 52/64 (81%) Frame = +1 Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687 +V VGTPGRV+DMI RRAL + +++FVLDEADEMLSRGF DQ +D+ ++L QV+LL Sbjct: 139 HVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLL 198 Query: 688 SATM 699 SATM Sbjct: 199 SATM 202 Score = 81.8 bits (193), Expect = 9e-17 Identities = 34/48 (70%), Positives = 44/48 (91%) Frame = +3 Query: 108 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251 ++ ++T++D+V++TFDDMNLK ELLRGIYAYGFE+PSAIQQRAIMP Sbjct: 5 LEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMP 52 >SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosaccharomyces pombe|chr 1|||Manual Length = 394 Score = 134 bits (324), Expect = 1e-32 Identities = 65/94 (69%), Positives = 79/94 (84%), Gaps = 3/94 (3%) Frame = +2 Query: 233 ATRNNALLQ---GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 403 A ++ A++Q GRDVIAQAQSGTGKTATFSI ILQ ID S+R+ QALIL+PTRELA QI Sbjct: 46 AVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQI 105 Query: 404 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 505 Q VV+ALGDH+N +CHACIGGT+V DI++L+ G Sbjct: 106 QNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYG 139 Score = 72.1 bits (169), Expect = 8e-14 Identities = 31/64 (48%), Positives = 46/64 (71%) Frame = +1 Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687 +V GTPGRV DMI RR L +K+ +LDEADE+L++GF +Q +D+ + L QV+++ Sbjct: 141 HVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVV 200 Query: 688 SATM 699 SAT+ Sbjct: 201 SATL 204 Score = 58.8 bits (136), Expect = 8e-10 Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%) Frame = +3 Query: 108 MDPGTLDTDWD-QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCSK 260 M+ L T D V +F++MNLKE+LLRGIYAYG+E PSA+Q RAI+ K Sbjct: 6 MENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICK 57 >SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccharomyces pombe|chr 2|||Manual Length = 485 Score = 86.2 bits (204), Expect = 4e-18 Identities = 42/85 (49%), Positives = 56/85 (65%) Frame = +2 Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433 L GRD++A+A++GTGKTA F I L+++DT + Q LIL PTRELA Q +V LG H Sbjct: 79 LSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKH 138 Query: 434 LNAKCHACIGGTNVREDIRQLESGV 508 +N K GGT +R+DI +L V Sbjct: 139 MNVKVMVTTGGTTLRDDIIRLNDTV 163 Score = 44.0 bits (99), Expect = 2e-05 Identities = 23/73 (31%), Positives = 37/73 (50%) Frame = +1 Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687 ++ VGTPGRV D+ + + FV+DEAD++LS F + + Q+ L Sbjct: 164 HIVVGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLY 223 Query: 688 SATMLXMYWKYLD 726 SAT + ++D Sbjct: 224 SATFPLIVKNFMD 236 Score = 42.3 bits (95), Expect = 7e-05 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Frame = +3 Query: 60 KNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET----FDDMNLKEELLRGIYAYGFEKPSA 227 +N D+ S+ G P + + V +T F+D LK ELL GI+ GFE+PS Sbjct: 10 ENANLNDRESFKGQMKAQPVDMRPKTEDVTKTRGTEFEDYYLKRELLMGIFEAGFERPSP 69 Query: 228 IQQRAI 245 IQ+ +I Sbjct: 70 IQEESI 75 >SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces pombe|chr 2|||Manual Length = 503 Score = 67.3 bits (157), Expect = 2e-12 Identities = 30/61 (49%), Positives = 46/61 (75%) Frame = +2 Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 442 R++I Q+QSGTGKTA F++++L ++D S+ + QA+ LAP+RELA+QI VV +G + Sbjct: 154 RNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEV 213 Query: 443 K 445 K Sbjct: 214 K 214 Score = 63.7 bits (148), Expect = 3e-11 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +1 Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFXDQXHDVXKMLSADVQVILL 687 + +GTPG V D++ RR L A IK+FVLDEAD ML +G DQ + +L + Q++L Sbjct: 233 IVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLF 292 Query: 688 SATMLXMYWKYLD 726 SAT KY + Sbjct: 293 SATFSERVEKYAE 305 Score = 43.6 bits (98), Expect = 3e-05 Identities = 17/33 (51%), Positives = 28/33 (84%) Frame = +3 Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245 V++F+++ LK ELL+GIY+ F+KPS IQ++A+ Sbjct: 113 VKSFEELELKPELLKGIYSMKFQKPSKIQEKAL 145 >SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccharomyces pombe|chr 2|||Manual Length = 453 Score = 62.1 bits (144), Expect = 8e-11 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%) Frame = +2 Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430 +L+GR+ I A++G+GKTA F++ I+++ ALIL PTRELA QI + ALG Sbjct: 41 ILEGRNCIGGAKTGSGKTAAFALPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGA 100 Query: 431 HLNAKCHACIGGTN-VREDI 487 +LN K +GG + +R+ I Sbjct: 101 NLNLKHALIVGGMDMIRQSI 120 Score = 42.3 bits (95), Expect = 7e-05 Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 6/70 (8%) Frame = +1 Query: 508 YVXVGTPGRVYDMITRRALHA----NTIKLFVLDEADEMLSRGFXDQXHDVXKML--SAD 669 +V V TPGR+ D+I IK V+DEAD +LS F D D +L S D Sbjct: 127 HVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASED 186 Query: 670 VQVILLSATM 699 Q +L +AT+ Sbjct: 187 RQTLLFTATV 196 >SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 465 Score = 60.5 bits (140), Expect = 3e-10 Identities = 29/75 (38%), Positives = 48/75 (64%) Frame = +2 Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430 +L RDVI AQ+G+GKTA F++ ++Q++ + A++LAPTRELA QI + A+G Sbjct: 80 VLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVVLAPTRELAYQISEQFEAIGG 139 Query: 431 HLNAKCHACIGGTNV 475 + + +GG ++ Sbjct: 140 SIGVRSVVIVGGMDM 154 Score = 39.5 bits (88), Expect = 5e-04 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = +1 Query: 508 YVXVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVIL 684 +V V TPGR+ D + + +K ++DEAD +L F + K++ + + +L Sbjct: 166 HVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLL 225 Query: 685 LSATM 699 SATM Sbjct: 226 FSATM 230 Score = 31.5 bits (68), Expect = 0.13 Identities = 20/78 (25%), Positives = 36/78 (46%) Frame = +3 Query: 12 MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLR 191 M+ S ++ +ED S N + S + D+ ++ +TF ++ + +EL Sbjct: 1 MAPSEKKLTEDKKNSSLNKKIETSNS-SSEKSSENNNGDSQNNEAPKTFKELGVIDELCE 59 Query: 192 GIYAYGFEKPSAIQQRAI 245 GF+ P+ IQQ AI Sbjct: 60 ACEKLGFKTPTPIQQEAI 77 >SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosaccharomyces pombe|chr 1|||Manual Length = 848 Score = 60.5 bits (140), Expect = 3e-10 Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 2/84 (2%) Frame = +2 Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSI--RECQALILAPTRELAQQIQKVVIAL 424 LL+GRDV+ A++G+GKTA F I +++ + +++ +ALIL+P RELA Q KVV Sbjct: 103 LLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDF 162 Query: 425 GDHLNAKCHACIGGTNVREDIRQL 496 + + A +GG ++ E L Sbjct: 163 SKGTDLRSVAIVGGVSLEEQFSLL 186 Score = 42.7 bits (96), Expect = 5e-05 Identities = 21/63 (33%), Positives = 31/63 (49%) Frame = +1 Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLS 690 + V TPGR + L ++I+ V DEAD + GF Q ++ L Q +L S Sbjct: 192 IVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLFS 251 Query: 691 ATM 699 AT+ Sbjct: 252 ATL 254 Score = 31.5 bits (68), Expect = 0.13 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245 F M L + LLR I+ GF+ P+ IQ++ I Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTI 100 >SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosaccharomyces pombe|chr 1|||Manual Length = 434 Score = 59.3 bits (137), Expect = 6e-10 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%) Frame = +2 Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 436 G DV+ QA+SG GKTA F +S LQQI+ E L+L TRELA QI+ +L Sbjct: 88 GTDVLCQAKSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLP 147 Query: 437 NAKCHACIGGTNVREDI 487 + + GG N+++D+ Sbjct: 148 DVRTAVFYGGINIKQDM 164 Score = 44.0 bits (99), Expect = 2e-05 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Frame = +1 Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFXDQXHDVXKMLSADVQVIL 684 ++ V TPGR+ ++ + L N++K FVLDE D++L S +V + QV++ Sbjct: 175 HIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMM 234 Query: 685 LSATM 699 SAT+ Sbjct: 235 FSATL 239 Score = 32.7 bits (71), Expect = 0.057 Identities = 17/30 (56%), Positives = 18/30 (60%) Frame = +3 Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245 F D LK ELLR I GFE PS +QQ I Sbjct: 53 FRDFLLKPELLRAITDSGFEHPSEVQQVCI 82 >SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharomyces pombe|chr 3|||Manual Length = 595 Score = 57.2 bits (132), Expect = 2e-09 Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 6/80 (7%) Frame = +2 Query: 254 LQGRDVIAQAQSGTGKTATFSISILQ------QIDTSIRECQALILAPTRELAQQIQKVV 415 L+G+D++AQA++G+GKTA + I IL+ QID + R AL+L PTRELAQQ+ V+ Sbjct: 49 LEGKDLVAQARTGSGKTAAYLIPILELLLKQKQIDENQRGIFALLLVPTRELAQQVYNVL 108 Query: 416 IALGDHLNAKCHACIGGTNV 475 + L A C I NV Sbjct: 109 ----EKLTAFCSKHIRFINV 124 Score = 40.3 bits (90), Expect = 3e-04 Identities = 20/63 (31%), Positives = 32/63 (50%) Frame = +1 Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLS 690 + + TP R + L + +K V+DEAD MLS G+ + + + L Q L+S Sbjct: 143 IVIATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFLMS 202 Query: 691 ATM 699 AT+ Sbjct: 203 ATL 205 Score = 32.7 bits (71), Expect = 0.057 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 150 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245 +TF D NL L R I+ FEKP+++Q I Sbjct: 14 KTFSDFNLDPRLQRAIHKCEFEKPTSVQSETI 45 >SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces pombe|chr 1|||Manual Length = 735 Score = 54.4 bits (125), Expect = 2e-08 Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 4/85 (4%) Frame = +2 Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQID----TSIRECQALILAPTRELAQQIQKVVIA 421 L+GRD++ A++G+GKT F + +++ + TS+ AL+++PTRELA Q + ++ Sbjct: 74 LKGRDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVK 133 Query: 422 LGDHLNAKCHACIGGTNVREDIRQL 496 +G + IGG N +E+ +L Sbjct: 134 IGRLHSFSAGLIIGGNNYKEEKERL 158 Score = 35.9 bits (79), Expect = 0.006 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +1 Query: 511 VXVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687 + V TPGR+ I + + +++ +LDEAD +L GF + L Q +L Sbjct: 163 ILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTMLF 222 Query: 688 SAT 696 SAT Sbjct: 223 SAT 225 >SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 754 Score = 54.0 bits (124), Expect = 2e-08 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Frame = +2 Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIAL 424 L G+D++ A +G+GKTA F + IL+++ + + LIL PTRELA Q V + Sbjct: 294 LLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKI 353 Query: 425 GDHLNAKCHACIGGTNVREDIRQL 496 + CIGG +++ ++L Sbjct: 354 ASFTDIMVCLCIGGLSLKLQEQEL 377 Score = 47.2 bits (107), Expect = 2e-06 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = +1 Query: 511 VXVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687 + + TPGR D M + I++ V+DEAD ML GF D+ +++ + Q +L Sbjct: 383 IVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLF 442 Query: 688 SATM 699 SATM Sbjct: 443 SATM 446 Score = 31.9 bits (69), Expect = 0.10 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245 +F MNL +L+G+ GFE P+ IQ + I Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTI 290 >SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 53.2 bits (122), Expect = 4e-08 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 8/93 (8%) Frame = +2 Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDT--SIRECQ------ALILAPTRELAQQIQ 406 LLQ +D+I A++G+GKTA F I ++ I + E A++LAPTRELAQQIQ Sbjct: 283 LLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQ 342 Query: 407 KVVIALGDHLNAKCHACIGGTNVREDIRQLESG 505 + L +C + +GG E Q+ G Sbjct: 343 VEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQG 375 Score = 44.0 bits (99), Expect = 2e-05 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSA 666 ++ V TPGR+ D + RR + V+DEAD ML GF D DV K+LS+ Sbjct: 377 HIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFED---DVNKILSS 426 >SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces pombe|chr 2|||Manual Length = 648 Score = 50.4 bits (115), Expect = 3e-07 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Frame = +2 Query: 260 GRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKVVIALGDH 433 G D+I +A +G+GKT F I IL+ + + QAL++APTRELA QI + + Sbjct: 159 GFDIIGKADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPTRELAHQICQHFELIKPS 218 Query: 434 LNAKCHACIGGTNVREDIRQL 496 N + + GG V++ R L Sbjct: 219 PNIRVMSITGGLAVQKQQRLL 239 Score = 37.5 bits (83), Expect = 0.002 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%) Frame = +1 Query: 508 YVXVGTPGRVYDMITRRALHAN--TIKLFVLDEADEMLSRGFXDQXHDVXKMLSADV--- 672 +V V TPGR++ +I L N IK VLDEAD +L + ++ + ++L + Sbjct: 244 HVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEILGNPMHTQ 303 Query: 673 -QVILLSAT 696 Q + SAT Sbjct: 304 RQTFIFSAT 312 >SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosaccharomyces pombe|chr 2|||Manual Length = 550 Score = 50.0 bits (114), Expect = 4e-07 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = +1 Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLS 690 + + TPGR+ DM+ + + VLDEAD ML GF Q + + D Q ++ S Sbjct: 248 ICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFS 307 Query: 691 AT 696 AT Sbjct: 308 AT 309 Score = 41.9 bits (94), Expect = 9e-05 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 5/90 (5%) Frame = +2 Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 418 + GRD++ + +G+GKT ++ + + I+ L+LAPTRELA QIQ+ Sbjct: 157 MSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECT 216 Query: 419 ALGDHLNAKCHACIGGTNVREDIRQLESGV 508 G + GG IR L GV Sbjct: 217 KFGKSSRIRNTCVYGGVPRGPQIRDLIRGV 246 Score = 28.3 bits (60), Expect = 1.2 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +3 Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRA 242 V TF++ +L+ + GFE P+ IQQ+A Sbjct: 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQA 152 >SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 578 Score = 48.4 bits (110), Expect = 1e-06 Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 4/90 (4%) Frame = +2 Query: 251 LLQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVI 418 LL GRDV+ A++G+GKT F +I +L + R +I++PTRELA QI V Sbjct: 123 LLAGRDVLGAAKTGSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAK 182 Query: 419 ALGDHLNAKCHACIGGTNVREDIRQLESGV 508 L + + IGG N R + +L GV Sbjct: 183 ELLKYHHQTFGIVIGGANRRAEADKLVKGV 212 Score = 41.5 bits (93), Expect = 1e-04 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = +1 Query: 517 VGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFXDQXHDVXKML-SADVQVILLS 690 V TPGR+ D + + ++ V+DEAD +L GF D+ + K+L S + Q +L S Sbjct: 216 VATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTLLFS 275 Query: 691 AT 696 AT Sbjct: 276 AT 277 Score = 32.7 bits (71), Expect = 0.057 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251 +E F D+ L E + + I GFE + IQ+R+I P Sbjct: 88 IEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPP 122 >SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosaccharomyces pombe|chr 3|||Manual Length = 1014 Score = 48.0 bits (109), Expect = 1e-06 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 5/91 (5%) Frame = +2 Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKV 412 A+ GRDVI A++G+GKT F + + + I ++ + A+I+ PTRELA QI + Sbjct: 451 AITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRE 510 Query: 413 VIALGDHLNAKCHACIGGTNVREDIRQLESG 505 LN + GG +++ I L+ G Sbjct: 511 CKPFLKLLNIRACCAYGGAPIKDQIADLKRG 541 Score = 40.7 bits (91), Expect = 2e-04 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Frame = +1 Query: 511 VXVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVI 681 + V TPGR+ D+++ R + + VLDEAD M GF Q + + D Q + Sbjct: 544 IVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTV 603 Query: 682 LLSAT 696 L SAT Sbjct: 604 LFSAT 608 Score = 26.2 bits (55), Expect = 5.0 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +3 Query: 132 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245 D + V ++ L + + I + G+EKP++IQ +AI Sbjct: 412 DCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAI 449 >SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 578 Score = 47.6 bits (108), Expect = 2e-06 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%) Frame = +2 Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQID---TSIRECQALILAPTRELAQQIQKVVIA 421 LL GRDV+ A++G+GKT F I LQ ++ + + L+++PTRELA Q + + + Sbjct: 199 LLAGRDVVGIAETGSGKTVAFGIPALQYLNGLSDNKSVPRVLVVSPTRELAIQTYENLNS 258 Query: 422 LGDHLNAKCHACIGGTNVREDIR 490 L N K GG E R Sbjct: 259 LIQGTNLKAVVVYGGAPKSEQAR 281 Score = 42.7 bits (96), Expect = 5e-05 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +1 Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDV 648 V +GTPGR+ D+I ++ + + VLDEAD ML GF ++ Sbjct: 288 VIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNI 333 >SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces pombe|chr 2|||Manual Length = 709 Score = 46.0 bits (104), Expect = 6e-06 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 11/106 (10%) Frame = +2 Query: 224 CNPATRNNALLQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPT 382 C PA N +D +AQ+G+GKT + + I+Q++ T A+I+APT Sbjct: 169 CLPALLNT---DDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPT 225 Query: 383 RELAQQIQKVVIALGD----HLNAKCHACIGGTNVREDIRQLESGV 508 REL QQI V L + H C+ IGG + + ++ GV Sbjct: 226 RELCQQIYNVANKLNNNPLSHWIVSCNV-IGGEKKKSEKARIRKGV 270 >SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Sum3|Schizosaccharomyces pombe|chr 3|||Manual Length = 636 Score = 46.0 bits (104), Expect = 6e-06 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Frame = +1 Query: 505 CYVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXK---MLSADV- 672 C + TPGR+ D+I R + IK VLDEAD ML GF Q + + M S + Sbjct: 306 CDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEER 365 Query: 673 QVILLSAT 696 Q ++ SAT Sbjct: 366 QTLMFSAT 373 Score = 40.7 bits (91), Expect = 2e-04 Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 20/112 (17%) Frame = +2 Query: 230 PATRNNA--LLQGRDVIAQAQSGTGKTATFSISIL--------------QQIDTSIRECQ 361 P +N+ + GRD++A AQ+G+GKTA F IL Q R + Sbjct: 194 PVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRK 253 Query: 362 A----LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 505 A LILAPTREL QI + + A GG ++R IRQ++ G Sbjct: 254 AYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQG 305 >SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 481 Score = 42.3 bits (95), Expect = 7e-05 Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%) Frame = +2 Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSI-RECQALILAPTRELAQQIQK 409 RD++A A +G+GKT + ILQ++ + +A+I+APTREL +QI + Sbjct: 84 RDLLACAPTGSGKTIAYLFPILQKLQLHVPGGYRAIIVAPTRELCEQIYR 133 Score = 36.3 bits (80), Expect = 0.005 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +1 Query: 517 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQ-XHDVXKMLSADVQVILLSA 693 +GTP R+ I + L ++ FV+DEAD + GF +Q H + S+++ L SA Sbjct: 171 IGTPMRLVQAI-QTGLSFEKVEFFVMDEADRLFEPGFIEQTDHILSACTSSNICKSLFSA 229 Query: 694 TM 699 T+ Sbjct: 230 TI 231 >SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces pombe|chr 2|||Manual Length = 606 Score = 41.5 bits (93), Expect = 1e-04 Identities = 20/63 (31%), Positives = 35/63 (55%) Frame = +1 Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLS 690 V +GTPGR+ +M++ + + +++ +LDEAD ++ GF + L + L S Sbjct: 135 VVIGTPGRLNEMLSH--ISSKHLEILILDEADTLIDMGFQRTLQSIISQLPKQRRTGLFS 192 Query: 691 ATM 699 ATM Sbjct: 193 ATM 195 Score = 41.1 bits (92), Expect = 2e-04 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Frame = +2 Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKV 412 L+ +D++ +A +G+GKT + + ++ DT ALI+APTRELA QI V Sbjct: 36 LKNKDLVVEAVTGSGKTLAYLLPCFDKVTRRDTDETGLGALIVAPTRELATQIFNV 91 >SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces pombe|chr 3|||Manual Length = 604 Score = 39.1 bits (87), Expect = 7e-04 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Frame = +2 Query: 260 GRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKVVIALGDHL 436 G DV A +G+GKT ++ I I+Q + ++ + +++ PTREL Q+ K Sbjct: 173 GGDVCVSAATGSGKTLSYVIPIVQCLSHRTVPRLRCVVIVPTRELTVQVAKTFEYYMSGA 232 Query: 437 NAKCHACIGGTNVREDIRQL 496 + A G ++R + QL Sbjct: 233 GLQVCAWTGQKSLRHETYQL 252 Score = 33.1 bits (72), Expect = 0.043 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +1 Query: 511 VXVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLS 663 V V TPGR+ D I + ++ V+DEAD +L + F D V +S Sbjct: 263 VLVSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEIS 314 >SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |Schizosaccharomyces pombe|chr 2|||Manual Length = 535 Score = 35.9 bits (79), Expect = 0.006 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Frame = +1 Query: 517 VGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFXDQXHDVXK-MLSADVQVILLS 690 + TPGR+ D + R L + + F+LDEAD ++ GF + ++ + + + + + S Sbjct: 168 IATPGRLEDHLQNPRILESLSTDSFILDEADRLMDMGFAESILNIHEAVTTTKTRKLCFS 227 Query: 691 ATM 699 ATM Sbjct: 228 ATM 230 Score = 35.1 bits (77), Expect = 0.011 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Frame = +2 Query: 242 NNALLQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQ 406 N + + QA++GTGKT F + + + + + ++IL+PTRELA QI Sbjct: 70 NEVFPNEENAVVQAKTGTGKTLAFLLVAFKDVLKGKPRLNSSKIHSVILSPTRELALQIF 129 Query: 407 KVVIALGDHLNAKCHACIGG-TNVRED 484 + L + IGG + +RE+ Sbjct: 130 EEARKLTYGTGIRVSYAIGGNSKMREE 156 >SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1063 Score = 35.9 bits (79), Expect = 0.006 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = +2 Query: 215 KTFCNPATRNNALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELA 394 KT+ + A N L G VI + +GK+ + I ILQ + + A + PT+ LA Sbjct: 311 KTYKHQADAINHLWNGFHVIVSTSTSSGKSLIYQIPILQSL-LEDNQSTAFFVFPTKSLA 369 Query: 395 QQIQKVVI 418 Q +K +I Sbjct: 370 QDQKKSLI 377 >SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharomyces pombe|chr 2|||Manual Length = 307 Score = 28.3 bits (60), Expect = 1.2 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = +3 Query: 123 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCSKD 263 LDT+W V + NL+ + + I + F PS I + MP D Sbjct: 184 LDTNWQVQVTPREPKNLQSQEVMDIDSSPFVSPSPISMKMDMPSLND 230 >SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosaccharomyces pombe|chr 2|||Manual Length = 466 Score = 27.9 bits (59), Expect = 1.6 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +3 Query: 120 TLDTDWDQVVETFDDMNLKEELLRGIYAYGF 212 T D WD E FDD N + +GI+ F Sbjct: 281 TDDIAWDPQCEYFDDCNSDQTAFKGIFMQSF 311 >SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces pombe|chr 2|||Manual Length = 505 Score = 27.5 bits (58), Expect = 2.2 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%) Frame = +2 Query: 290 GTGKTATFSISILQQI----DTSIRECQALILAP-TRELAQQIQ 406 G G T F+ SILQQI + SI +C + +P R + ++IQ Sbjct: 89 GKGSTCAFTSSILQQIQKSGERSIPKCIGMYTSPHLRSVCERIQ 132 >SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe|chr 2|||Manual Length = 882 Score = 27.1 bits (57), Expect = 2.9 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 1/81 (1%) Frame = +2 Query: 365 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVMXXWALQVVYMI 544 L L P E KVV+ L D L + G N+R LE G WA +V Y Sbjct: 31 LSLYPDLETFTYGGKVVVTL-DVLEDSNSITLHGINLRILTAALEWGSQTVWASEVSYGD 89 Query: 545 **LVVRFMPT-PSNFLFLMKL 604 +V++F T P+N + ++ L Sbjct: 90 ERIVLQFPSTVPANSVAVLTL 110 >SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccharomyces pombe|chr 1|||Manual Length = 549 Score = 27.1 bits (57), Expect = 2.9 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 322 DSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 423 D+ TNR + SSFD S P+N++G ++ Sbjct: 487 DAWTNRKRPGYSSSFDGSSQSTFNPSNNDGAHNT 520 >SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 713 Score = 27.1 bits (57), Expect = 2.9 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Frame = +3 Query: 126 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKP--SAIQQRAIMPCSKDAMLSLKPSQELE 299 DTDWD +V + D++L+ RGI A G + + Q+ A + SK +LK ++ Sbjct: 618 DTDWDALV-SLSDLDLQN---RGIMALGARRKLLKSFQEVAPLVSSKKMNENLKAAKNQS 673 Query: 300 KLLLSLYRFYNKS 338 L+ ++ + S Sbjct: 674 SESLTSFKGHTDS 686 >SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual Length = 301 Score = 26.6 bits (56), Expect = 3.8 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +1 Query: 97 DLREWTLGHLTPT 135 DLREWTLG L P+ Sbjct: 110 DLREWTLGFLQPS 122 >SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 342 Score = 26.6 bits (56), Expect = 3.8 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +1 Query: 532 RVYDMITRRALHANTIKLFVLDEADEM 612 ++ + + R + A+T K+ +LDEAD M Sbjct: 106 QIKNFASTRQIFASTFKMIILDEADAM 132 >SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein Pvg2|Schizosaccharomyces pombe|chr 1|||Manual Length = 389 Score = 26.2 bits (55), Expect = 5.0 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -1 Query: 436 QVITKSYHHLLNLLGQLSCGSQDQ 365 +++ KSYH+L N QLS ++DQ Sbjct: 165 ELVDKSYHNLHNAWSQLSREAKDQ 188 >SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual Length = 613 Score = 25.8 bits (54), Expect = 6.6 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +2 Query: 401 IQKVVIALGDHLNAKCHACIGGTNVRED 484 ++ + A+ DHL+ + CIG N+ ED Sbjct: 134 VEMIRRAISDHLDLLNNCCIGIANLNED 161 >SPBC25H2.03 |||vacuolar protein involved in phosphoinositide metabolism|Schizosaccharomyces pombe|chr 2|||Manual Length = 811 Score = 25.8 bits (54), Expect = 6.6 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%) Frame = -1 Query: 496 QLANIFTDIGAT---NASMAFSIQVITKSYHHLLNLL 395 +L NIFT + N+ FS+ +++++Y H NLL Sbjct: 598 KLQNIFTTLYTAWCHNSIAVFSLCLLSQNYEHAANLL 634 >SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1000 Score = 25.8 bits (54), Expect = 6.6 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = -1 Query: 568 HEAHDELSYHIHDLECPXXHNTTLQLANIFTDIGATNASM 449 +EA + L HI+ P N + +++ T + ATN M Sbjct: 300 YEASERLGGHIYTHMVPLSDNEVSEKSSLATTVNATNECM 339 >SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces pombe|chr 1|||Manual Length = 101 Score = 25.8 bits (54), Expect = 6.6 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 117 QGPFPEVHRNYLDPSMAHFWNPLANL 40 Q P P VH ++ PS A NPL ++ Sbjct: 75 QNPPPSVHSSHKQPSKARSPNPLLSM 100 >SPCC16A11.07 |coq10||ubiquinone binding protein Coq10|Schizosaccharomyces pombe|chr 3|||Manual Length = 164 Score = 25.4 bits (53), Expect = 8.7 Identities = 10/33 (30%), Positives = 16/33 (48%) Frame = +1 Query: 247 CLAPRTRCYRSSPVRNWKNCYFLYIDSTTNRYK 345 C R CYR+S + +K + + S N Y+ Sbjct: 5 CTLRRLECYRASRLMPYKPSFLFSLISNVNEYE 37 >SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Schizosaccharomyces pombe|chr 3|||Manual Length = 785 Score = 25.4 bits (53), Expect = 8.7 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = -2 Query: 606 ISFIKNKKFDGVGMKRTTSYHIIYTTWS-AHXXITPLSSWRISSRTLVP 463 IS + K+ DG+GM T +I+ T + + L W S R +P Sbjct: 158 ISEVHLKRLDGLGMYSTIQQYIVTTKEAICSAVMEDLHEWLFSIRQKLP 206 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,173,708 Number of Sequences: 5004 Number of extensions: 67149 Number of successful extensions: 260 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 204 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 243 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 357280532 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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