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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0815
         (751 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar...   140   2e-34
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa...   134   1e-32
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha...    86   4e-18
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc...    67   2e-12
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha...    62   8e-11
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy...    60   3e-10
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac...    60   3e-10
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc...    59   6e-10
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom...    57   2e-09
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy...    54   2e-08
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch...    54   2e-08
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch...    53   4e-08
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy...    50   3e-07
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar...    50   4e-07
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy...    48   1e-06
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc...    48   1e-06
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha...    48   2e-06
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy...    46   6e-06
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su...    46   6e-06
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch...    42   7e-05
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy...    42   1e-04
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce...    39   7e-04
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S...    36   0.006
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos...    36   0.006
SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharo...    28   1.2  
SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar...    28   1.6  
SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p...    27   2.2  
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe...    27   2.9  
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha...    27   2.9  
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces...    27   2.9  
SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual     27   3.8  
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex...    27   3.8  
SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein P...    26   5.0  
SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual    26   6.6  
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met...    26   6.6  
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo...    26   6.6  
SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces p...    26   6.6  
SPCC16A11.07 |coq10||ubiquinone binding protein Coq10|Schizosacc...    25   8.7  
SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc...    25   8.7  

>SPAC1006.07 |||translation initiation factor
           eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 392

 Score =  140 bits (339), Expect = 2e-34
 Identities = 65/86 (75%), Positives = 79/86 (91%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430
           +L  RDV+AQAQSGTGKTATFSIS+LQ+IDTS+++CQALILAPTRELAQQIQKVV+ALGD
Sbjct: 53  ILGERDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGD 112

Query: 431 HLNAKCHACIGGTNVREDIRQLESGV 508
            +N +CHACIGGT VR+D+  L++GV
Sbjct: 113 LMNVECHACIGGTLVRDDMAALQAGV 138



 Score = 89.4 bits (212), Expect = 5e-19
 Identities = 41/64 (64%), Positives = 52/64 (81%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687
           +V VGTPGRV+DMI RRAL  + +++FVLDEADEMLSRGF DQ +D+ ++L    QV+LL
Sbjct: 139 HVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLL 198

Query: 688 SATM 699
           SATM
Sbjct: 199 SATM 202



 Score = 81.8 bits (193), Expect = 9e-17
 Identities = 34/48 (70%), Positives = 44/48 (91%)
 Frame = +3

Query: 108 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251
           ++   ++T++D+V++TFDDMNLK ELLRGIYAYGFE+PSAIQQRAIMP
Sbjct: 5   LEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMP 52


>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
           related|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 394

 Score =  134 bits (324), Expect = 1e-32
 Identities = 65/94 (69%), Positives = 79/94 (84%), Gaps = 3/94 (3%)
 Frame = +2

Query: 233 ATRNNALLQ---GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 403
           A ++ A++Q   GRDVIAQAQSGTGKTATFSI ILQ ID S+R+ QALIL+PTRELA QI
Sbjct: 46  AVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQI 105

Query: 404 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
           Q VV+ALGDH+N +CHACIGGT+V  DI++L+ G
Sbjct: 106 QNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYG 139



 Score = 72.1 bits (169), Expect = 8e-14
 Identities = 31/64 (48%), Positives = 46/64 (71%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687
           +V  GTPGRV DMI RR L    +K+ +LDEADE+L++GF +Q +D+ + L    QV+++
Sbjct: 141 HVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVV 200

Query: 688 SATM 699
           SAT+
Sbjct: 201 SATL 204



 Score = 58.8 bits (136), Expect = 8e-10
 Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
 Frame = +3

Query: 108 MDPGTLDTDWD-QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCSK 260
           M+   L T  D   V +F++MNLKE+LLRGIYAYG+E PSA+Q RAI+   K
Sbjct: 6   MENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICK 57


>SPBC776.09 |ste13||ATP-dependent RNA helicase
           Ste13|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 485

 Score = 86.2 bits (204), Expect = 4e-18
 Identities = 42/85 (49%), Positives = 56/85 (65%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
           L GRD++A+A++GTGKTA F I  L+++DT   + Q LIL PTRELA Q  +V   LG H
Sbjct: 79  LSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKH 138

Query: 434 LNAKCHACIGGTNVREDIRQLESGV 508
           +N K     GGT +R+DI +L   V
Sbjct: 139 MNVKVMVTTGGTTLRDDIIRLNDTV 163



 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 23/73 (31%), Positives = 37/73 (50%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687
           ++ VGTPGRV D+  +     +    FV+DEAD++LS  F      +      + Q+ L 
Sbjct: 164 HIVVGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLY 223

Query: 688 SATMLXMYWKYLD 726
           SAT   +   ++D
Sbjct: 224 SATFPLIVKNFMD 236



 Score = 42.3 bits (95), Expect = 7e-05
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = +3

Query: 60  KNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET----FDDMNLKEELLRGIYAYGFEKPSA 227
           +N    D+ S+ G     P  +    + V +T    F+D  LK ELL GI+  GFE+PS 
Sbjct: 10  ENANLNDRESFKGQMKAQPVDMRPKTEDVTKTRGTEFEDYYLKRELLMGIFEAGFERPSP 69

Query: 228 IQQRAI 245
           IQ+ +I
Sbjct: 70  IQEESI 75


>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 503

 Score = 67.3 bits (157), Expect = 2e-12
 Identities = 30/61 (49%), Positives = 46/61 (75%)
 Frame = +2

Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 442
           R++I Q+QSGTGKTA F++++L ++D S+ + QA+ LAP+RELA+QI  VV  +G +   
Sbjct: 154 RNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEV 213

Query: 443 K 445
           K
Sbjct: 214 K 214



 Score = 63.7 bits (148), Expect = 3e-11
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFXDQXHDVXKMLSADVQVILL 687
           + +GTPG V D++ RR L A  IK+FVLDEAD ML  +G  DQ   +  +L  + Q++L 
Sbjct: 233 IVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLF 292

Query: 688 SATMLXMYWKYLD 726
           SAT      KY +
Sbjct: 293 SATFSERVEKYAE 305



 Score = 43.6 bits (98), Expect = 3e-05
 Identities = 17/33 (51%), Positives = 28/33 (84%)
 Frame = +3

Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           V++F+++ LK ELL+GIY+  F+KPS IQ++A+
Sbjct: 113 VKSFEELELKPELLKGIYSMKFQKPSKIQEKAL 145


>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 453

 Score = 62.1 bits (144), Expect = 8e-11
 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430
           +L+GR+ I  A++G+GKTA F++ I+++         ALIL PTRELA QI +   ALG 
Sbjct: 41  ILEGRNCIGGAKTGSGKTAAFALPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGA 100

Query: 431 HLNAKCHACIGGTN-VREDI 487
           +LN K    +GG + +R+ I
Sbjct: 101 NLNLKHALIVGGMDMIRQSI 120



 Score = 42.3 bits (95), Expect = 7e-05
 Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHA----NTIKLFVLDEADEMLSRGFXDQXHDVXKML--SAD 669
           +V V TPGR+ D+I             IK  V+DEAD +LS  F D   D   +L  S D
Sbjct: 127 HVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASED 186

Query: 670 VQVILLSATM 699
            Q +L +AT+
Sbjct: 187 RQTLLFTATV 196


>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 465

 Score = 60.5 bits (140), Expect = 3e-10
 Identities = 29/75 (38%), Positives = 48/75 (64%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430
           +L  RDVI  AQ+G+GKTA F++ ++Q++  +     A++LAPTRELA QI +   A+G 
Sbjct: 80  VLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVVLAPTRELAYQISEQFEAIGG 139

Query: 431 HLNAKCHACIGGTNV 475
            +  +    +GG ++
Sbjct: 140 SIGVRSVVIVGGMDM 154



 Score = 39.5 bits (88), Expect = 5e-04
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVIL 684
           +V V TPGR+ D +   +      +K  ++DEAD +L   F      + K++  + + +L
Sbjct: 166 HVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLL 225

Query: 685 LSATM 699
            SATM
Sbjct: 226 FSATM 230



 Score = 31.5 bits (68), Expect = 0.13
 Identities = 20/78 (25%), Positives = 36/78 (46%)
 Frame = +3

Query: 12  MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLR 191
           M+ S ++ +ED    S N   +   S       +    D+  ++  +TF ++ + +EL  
Sbjct: 1   MAPSEKKLTEDKKNSSLNKKIETSNS-SSEKSSENNNGDSQNNEAPKTFKELGVIDELCE 59

Query: 192 GIYAYGFEKPSAIQQRAI 245
                GF+ P+ IQQ AI
Sbjct: 60  ACEKLGFKTPTPIQQEAI 77


>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 848

 Score = 60.5 bits (140), Expect = 3e-10
 Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSI--RECQALILAPTRELAQQIQKVVIAL 424
           LL+GRDV+  A++G+GKTA F I +++ + +++     +ALIL+P RELA Q  KVV   
Sbjct: 103 LLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDF 162

Query: 425 GDHLNAKCHACIGGTNVREDIRQL 496
               + +  A +GG ++ E    L
Sbjct: 163 SKGTDLRSVAIVGGVSLEEQFSLL 186



 Score = 42.7 bits (96), Expect = 5e-05
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLS 690
           + V TPGR   +     L  ++I+  V DEAD +   GF  Q  ++   L    Q +L S
Sbjct: 192 IVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLFS 251

Query: 691 ATM 699
           AT+
Sbjct: 252 ATL 254



 Score = 31.5 bits (68), Expect = 0.13
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           F  M L + LLR I+  GF+ P+ IQ++ I
Sbjct: 71  FQSMGLNQTLLRAIFKKGFKAPTPIQRKTI 100


>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
           Uap56|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 434

 Score = 59.3 bits (137), Expect = 6e-10
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 436
           G DV+ QA+SG GKTA F +S LQQI+    E   L+L  TRELA QI+        +L 
Sbjct: 88  GTDVLCQAKSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLP 147

Query: 437 NAKCHACIGGTNVREDI 487
           + +     GG N+++D+
Sbjct: 148 DVRTAVFYGGINIKQDM 164



 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFXDQXHDVXKMLSADVQVIL 684
           ++ V TPGR+  ++  + L  N++K FVLDE D++L S        +V +      QV++
Sbjct: 175 HIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMM 234

Query: 685 LSATM 699
            SAT+
Sbjct: 235 FSATL 239



 Score = 32.7 bits (71), Expect = 0.057
 Identities = 17/30 (56%), Positives = 18/30 (60%)
 Frame = +3

Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           F D  LK ELLR I   GFE PS +QQ  I
Sbjct: 53  FRDFLLKPELLRAITDSGFEHPSEVQQVCI 82


>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 595

 Score = 57.2 bits (132), Expect = 2e-09
 Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQ------QIDTSIRECQALILAPTRELAQQIQKVV 415
           L+G+D++AQA++G+GKTA + I IL+      QID + R   AL+L PTRELAQQ+  V+
Sbjct: 49  LEGKDLVAQARTGSGKTAAYLIPILELLLKQKQIDENQRGIFALLLVPTRELAQQVYNVL 108

Query: 416 IALGDHLNAKCHACIGGTNV 475
               + L A C   I   NV
Sbjct: 109 ----EKLTAFCSKHIRFINV 124



 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 20/63 (31%), Positives = 32/63 (50%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLS 690
           + + TP R    +    L  + +K  V+DEAD MLS G+ +    + + L    Q  L+S
Sbjct: 143 IVIATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFLMS 202

Query: 691 ATM 699
           AT+
Sbjct: 203 ATL 205



 Score = 32.7 bits (71), Expect = 0.057
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 150 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           +TF D NL   L R I+   FEKP+++Q   I
Sbjct: 14  KTFSDFNLDPRLQRAIHKCEFEKPTSVQSETI 45


>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 735

 Score = 54.4 bits (125), Expect = 2e-08
 Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQID----TSIRECQALILAPTRELAQQIQKVVIA 421
           L+GRD++  A++G+GKT  F + +++ +     TS+    AL+++PTRELA Q  + ++ 
Sbjct: 74  LKGRDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVK 133

Query: 422 LGDHLNAKCHACIGGTNVREDIRQL 496
           +G   +      IGG N +E+  +L
Sbjct: 134 IGRLHSFSAGLIIGGNNYKEEKERL 158



 Score = 35.9 bits (79), Expect = 0.006
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687
           + V TPGR+   I +      + +++ +LDEAD +L  GF      +   L    Q +L 
Sbjct: 163 ILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTMLF 222

Query: 688 SAT 696
           SAT
Sbjct: 223 SAT 225


>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 754

 Score = 54.0 bits (124), Expect = 2e-08
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIAL 424
           L G+D++  A +G+GKTA F + IL+++      +   + LIL PTRELA Q   V   +
Sbjct: 294 LLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKI 353

Query: 425 GDHLNAKCHACIGGTNVREDIRQL 496
               +     CIGG +++   ++L
Sbjct: 354 ASFTDIMVCLCIGGLSLKLQEQEL 377



 Score = 47.2 bits (107), Expect = 2e-06
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +1

Query: 511 VXVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687
           + + TPGR  D M   +      I++ V+DEAD ML  GF D+ +++ +      Q +L 
Sbjct: 383 IVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLF 442

Query: 688 SATM 699
           SATM
Sbjct: 443 SATM 446



 Score = 31.9 bits (69), Expect = 0.10
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           +F  MNL   +L+G+   GFE P+ IQ + I
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTI 290


>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score = 53.2 bits (122), Expect = 4e-08
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDT--SIRECQ------ALILAPTRELAQQIQ 406
           LLQ +D+I  A++G+GKTA F I ++  I     + E        A++LAPTRELAQQIQ
Sbjct: 283 LLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQ 342

Query: 407 KVVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
                  + L  +C + +GG    E   Q+  G
Sbjct: 343 VEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQG 375



 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 23/53 (43%), Positives = 31/53 (58%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSA 666
           ++ V TPGR+ D + RR    +     V+DEAD ML  GF D   DV K+LS+
Sbjct: 377 HIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFED---DVNKILSS 426


>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 648

 Score = 50.4 bits (115), Expect = 3e-07
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKVVIALGDH 433
           G D+I +A +G+GKT  F I IL+    +   +  QAL++APTRELA QI +    +   
Sbjct: 159 GFDIIGKADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPTRELAHQICQHFELIKPS 218

Query: 434 LNAKCHACIGGTNVREDIRQL 496
            N +  +  GG  V++  R L
Sbjct: 219 PNIRVMSITGGLAVQKQQRLL 239



 Score = 37.5 bits (83), Expect = 0.002
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHAN--TIKLFVLDEADEMLSRGFXDQXHDVXKMLSADV--- 672
           +V V TPGR++ +I    L  N   IK  VLDEAD +L +   ++   + ++L   +   
Sbjct: 244 HVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEILGNPMHTQ 303

Query: 673 -QVILLSAT 696
            Q  + SAT
Sbjct: 304 RQTFIFSAT 312


>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
           Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 550

 Score = 50.0 bits (114), Expect = 4e-07
 Identities = 22/62 (35%), Positives = 32/62 (51%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLS 690
           + + TPGR+ DM+     +   +   VLDEAD ML  GF  Q   +   +  D Q ++ S
Sbjct: 248 ICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFS 307

Query: 691 AT 696
           AT
Sbjct: 308 AT 309



 Score = 41.9 bits (94), Expect = 9e-05
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 418
           + GRD++  + +G+GKT ++ +  +  I+             L+LAPTRELA QIQ+   
Sbjct: 157 MSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECT 216

Query: 419 ALGDHLNAKCHACIGGTNVREDIRQLESGV 508
             G     +     GG      IR L  GV
Sbjct: 217 KFGKSSRIRNTCVYGGVPRGPQIRDLIRGV 246



 Score = 28.3 bits (60), Expect = 1.2
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRA 242
           V TF++      +L+ +   GFE P+ IQQ+A
Sbjct: 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQA 152


>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 578

 Score = 48.4 bits (110), Expect = 1e-06
 Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVI 418
           LL GRDV+  A++G+GKT  F   +I +L  +    R     +I++PTRELA QI  V  
Sbjct: 123 LLAGRDVLGAAKTGSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAK 182

Query: 419 ALGDHLNAKCHACIGGTNVREDIRQLESGV 508
            L  + +      IGG N R +  +L  GV
Sbjct: 183 ELLKYHHQTFGIVIGGANRRAEADKLVKGV 212



 Score = 41.5 bits (93), Expect = 1e-04
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +1

Query: 517 VGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFXDQXHDVXKML-SADVQVILLS 690
           V TPGR+ D +   +      ++  V+DEAD +L  GF D+   + K+L S + Q +L S
Sbjct: 216 VATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTLLFS 275

Query: 691 AT 696
           AT
Sbjct: 276 AT 277



 Score = 32.7 bits (71), Expect = 0.057
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 251
           +E F D+ L E + + I   GFE  + IQ+R+I P
Sbjct: 88  IEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPP 122


>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
           Prp11|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1014

 Score = 48.0 bits (109), Expect = 1e-06
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
 Frame = +2

Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKV 412
           A+  GRDVI  A++G+GKT  F + + + I     ++  +   A+I+ PTRELA QI + 
Sbjct: 451 AITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRE 510

Query: 413 VIALGDHLNAKCHACIGGTNVREDIRQLESG 505
                  LN +     GG  +++ I  L+ G
Sbjct: 511 CKPFLKLLNIRACCAYGGAPIKDQIADLKRG 541



 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVI 681
           + V TPGR+ D+++    R  + +     VLDEAD M   GF  Q   +   +  D Q +
Sbjct: 544 IVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTV 603

Query: 682 LLSAT 696
           L SAT
Sbjct: 604 LFSAT 608



 Score = 26.2 bits (55), Expect = 5.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 132 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           D  + V ++    L  + +  I + G+EKP++IQ +AI
Sbjct: 412 DCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAI 449


>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 578

 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQID---TSIRECQALILAPTRELAQQIQKVVIA 421
           LL GRDV+  A++G+GKT  F I  LQ ++    +    + L+++PTRELA Q  + + +
Sbjct: 199 LLAGRDVVGIAETGSGKTVAFGIPALQYLNGLSDNKSVPRVLVVSPTRELAIQTYENLNS 258

Query: 422 LGDHLNAKCHACIGGTNVREDIR 490
           L    N K     GG    E  R
Sbjct: 259 LIQGTNLKAVVVYGGAPKSEQAR 281



 Score = 42.7 bits (96), Expect = 5e-05
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDV 648
           V +GTPGR+ D+I   ++  + +   VLDEAD ML  GF     ++
Sbjct: 288 VIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNI 333


>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 709

 Score = 46.0 bits (104), Expect = 6e-06
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
 Frame = +2

Query: 224 CNPATRNNALLQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPT 382
           C PA  N      +D   +AQ+G+GKT  + + I+Q++        T      A+I+APT
Sbjct: 169 CLPALLNT---DDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPT 225

Query: 383 RELAQQIQKVVIALGD----HLNAKCHACIGGTNVREDIRQLESGV 508
           REL QQI  V   L +    H    C+  IGG   + +  ++  GV
Sbjct: 226 RELCQQIYNVANKLNNNPLSHWIVSCNV-IGGEKKKSEKARIRKGV 270


>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
           Sum3|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 636

 Score = 46.0 bits (104), Expect = 6e-06
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +1

Query: 505 CYVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXK---MLSADV- 672
           C +   TPGR+ D+I R  +    IK  VLDEAD ML  GF  Q   + +   M S +  
Sbjct: 306 CDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEER 365

Query: 673 QVILLSAT 696
           Q ++ SAT
Sbjct: 366 QTLMFSAT 373



 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
 Frame = +2

Query: 230 PATRNNA--LLQGRDVIAQAQSGTGKTATFSISIL--------------QQIDTSIRECQ 361
           P  +N+   +  GRD++A AQ+G+GKTA F   IL              Q      R  +
Sbjct: 194 PVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRK 253

Query: 362 A----LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
           A    LILAPTREL  QI +           +  A  GG ++R  IRQ++ G
Sbjct: 254 AYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQG 305


>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 481

 Score = 42.3 bits (95), Expect = 7e-05
 Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = +2

Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSI-RECQALILAPTRELAQQIQK 409
           RD++A A +G+GKT  +   ILQ++   +    +A+I+APTREL +QI +
Sbjct: 84  RDLLACAPTGSGKTIAYLFPILQKLQLHVPGGYRAIIVAPTRELCEQIYR 133



 Score = 36.3 bits (80), Expect = 0.005
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +1

Query: 517 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQ-XHDVXKMLSADVQVILLSA 693
           +GTP R+   I +  L    ++ FV+DEAD +   GF +Q  H +    S+++   L SA
Sbjct: 171 IGTPMRLVQAI-QTGLSFEKVEFFVMDEADRLFEPGFIEQTDHILSACTSSNICKSLFSA 229

Query: 694 TM 699
           T+
Sbjct: 230 TI 231


>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 606

 Score = 41.5 bits (93), Expect = 1e-04
 Identities = 20/63 (31%), Positives = 35/63 (55%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLS 690
           V +GTPGR+ +M++   + +  +++ +LDEAD ++  GF      +   L    +  L S
Sbjct: 135 VVIGTPGRLNEMLSH--ISSKHLEILILDEADTLIDMGFQRTLQSIISQLPKQRRTGLFS 192

Query: 691 ATM 699
           ATM
Sbjct: 193 ATM 195



 Score = 41.1 bits (92), Expect = 2e-04
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKV 412
           L+ +D++ +A +G+GKT  + +    ++   DT      ALI+APTRELA QI  V
Sbjct: 36  LKNKDLVVEAVTGSGKTLAYLLPCFDKVTRRDTDETGLGALIVAPTRELATQIFNV 91


>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 604

 Score = 39.1 bits (87), Expect = 7e-04
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKVVIALGDHL 436
           G DV   A +G+GKT ++ I I+Q +   ++   + +++ PTREL  Q+ K         
Sbjct: 173 GGDVCVSAATGSGKTLSYVIPIVQCLSHRTVPRLRCVVIVPTRELTVQVAKTFEYYMSGA 232

Query: 437 NAKCHACIGGTNVREDIRQL 496
             +  A  G  ++R +  QL
Sbjct: 233 GLQVCAWTGQKSLRHETYQL 252



 Score = 33.1 bits (72), Expect = 0.043
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLS 663
           V V TPGR+ D I    +     ++  V+DEAD +L + F D    V   +S
Sbjct: 263 VLVSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEIS 314


>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 535

 Score = 35.9 bits (79), Expect = 0.006
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = +1

Query: 517 VGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFXDQXHDVXK-MLSADVQVILLS 690
           + TPGR+ D +   R L + +   F+LDEAD ++  GF +   ++ + + +   + +  S
Sbjct: 168 IATPGRLEDHLQNPRILESLSTDSFILDEADRLMDMGFAESILNIHEAVTTTKTRKLCFS 227

Query: 691 ATM 699
           ATM
Sbjct: 228 ATM 230



 Score = 35.1 bits (77), Expect = 0.011
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
 Frame = +2

Query: 242 NNALLQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQ 406
           N       + + QA++GTGKT  F +   + +       +  +  ++IL+PTRELA QI 
Sbjct: 70  NEVFPNEENAVVQAKTGTGKTLAFLLVAFKDVLKGKPRLNSSKIHSVILSPTRELALQIF 129

Query: 407 KVVIALGDHLNAKCHACIGG-TNVRED 484
           +    L      +    IGG + +RE+
Sbjct: 130 EEARKLTYGTGIRVSYAIGGNSKMREE 156


>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1063

 Score = 35.9 bits (79), Expect = 0.006
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = +2

Query: 215 KTFCNPATRNNALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELA 394
           KT+ + A   N L  G  VI    + +GK+  + I ILQ +     +  A  + PT+ LA
Sbjct: 311 KTYKHQADAINHLWNGFHVIVSTSTSSGKSLIYQIPILQSL-LEDNQSTAFFVFPTKSLA 369

Query: 395 QQIQKVVI 418
           Q  +K +I
Sbjct: 370 QDQKKSLI 377


>SPBC27.02c |ask1|mug181|DASH complex subunit
           Ask1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 307

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 123 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCSKD 263
           LDT+W   V   +  NL+ + +  I +  F  PS I  +  MP   D
Sbjct: 184 LDTNWQVQVTPREPKNLQSQEVMDIDSSPFVSPSPISMKMDMPSLND 230


>SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 466

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 120 TLDTDWDQVVETFDDMNLKEELLRGIYAYGF 212
           T D  WD   E FDD N  +   +GI+   F
Sbjct: 281 TDDIAWDPQCEYFDDCNSDQTAFKGIFMQSF 311


>SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 505

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
 Frame = +2

Query: 290 GTGKTATFSISILQQI----DTSIRECQALILAP-TRELAQQIQ 406
           G G T  F+ SILQQI    + SI +C  +  +P  R + ++IQ
Sbjct: 89  GKGSTCAFTSSILQQIQKSGERSIPKCIGMYTSPHLRSVCERIQ 132


>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 882

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +2

Query: 365 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVMXXWALQVVYMI 544
           L L P  E      KVV+ L D L       + G N+R     LE G    WA +V Y  
Sbjct: 31  LSLYPDLETFTYGGKVVVTL-DVLEDSNSITLHGINLRILTAALEWGSQTVWASEVSYGD 89

Query: 545 **LVVRFMPT-PSNFLFLMKL 604
             +V++F  T P+N + ++ L
Sbjct: 90  ERIVLQFPSTVPANSVAVLTL 110


>SPAPJ696.01c |vps17||retromer complex subunit
           Vps17|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 549

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 322 DSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 423
           D+ TNR +    SSFD  S     P+N++G  ++
Sbjct: 487 DAWTNRKRPGYSSSFDGSSQSTFNPSNNDGAHNT 520


>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 713

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = +3

Query: 126 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKP--SAIQQRAIMPCSKDAMLSLKPSQELE 299
           DTDWD +V +  D++L+    RGI A G  +    + Q+ A +  SK    +LK ++   
Sbjct: 618 DTDWDALV-SLSDLDLQN---RGIMALGARRKLLKSFQEVAPLVSSKKMNENLKAAKNQS 673

Query: 300 KLLLSLYRFYNKS 338
              L+ ++ +  S
Sbjct: 674 SESLTSFKGHTDS 686


>SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 301

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +1

Query: 97  DLREWTLGHLTPT 135
           DLREWTLG L P+
Sbjct: 110 DLREWTLGFLQPS 122


>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
           subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 342

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 532 RVYDMITRRALHANTIKLFVLDEADEM 612
           ++ +  + R + A+T K+ +LDEAD M
Sbjct: 106 QIKNFASTRQIFASTFKMIILDEADAM 132


>SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein
           Pvg2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 389

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 436 QVITKSYHHLLNLLGQLSCGSQDQ 365
           +++ KSYH+L N   QLS  ++DQ
Sbjct: 165 ELVDKSYHNLHNAWSQLSREAKDQ 188


>SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 613

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 401 IQKVVIALGDHLNAKCHACIGGTNVRED 484
           ++ +  A+ DHL+   + CIG  N+ ED
Sbjct: 134 VEMIRRAISDHLDLLNNCCIGIANLNED 161


>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
           metabolism|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 811

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -1

Query: 496 QLANIFTDIGAT---NASMAFSIQVITKSYHHLLNLL 395
           +L NIFT +      N+   FS+ +++++Y H  NLL
Sbjct: 598 KLQNIFTTLYTAWCHNSIAVFSLCLLSQNYEHAANLL 634


>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
           SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1000

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 568 HEAHDELSYHIHDLECPXXHNTTLQLANIFTDIGATNASM 449
           +EA + L  HI+    P   N   + +++ T + ATN  M
Sbjct: 300 YEASERLGGHIYTHMVPLSDNEVSEKSSLATTVNATNECM 339


>SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 101

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 117 QGPFPEVHRNYLDPSMAHFWNPLANL 40
           Q P P VH ++  PS A   NPL ++
Sbjct: 75  QNPPPSVHSSHKQPSKARSPNPLLSM 100


>SPCC16A11.07 |coq10||ubiquinone binding protein
           Coq10|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 164

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 247 CLAPRTRCYRSSPVRNWKNCYFLYIDSTTNRYK 345
           C   R  CYR+S +  +K  +   + S  N Y+
Sbjct: 5   CTLRRLECYRASRLMPYKPSFLFSLISNVNEYE 37


>SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 785

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -2

Query: 606 ISFIKNKKFDGVGMKRTTSYHIIYTTWS-AHXXITPLSSWRISSRTLVP 463
           IS +  K+ DG+GM  T   +I+ T  +     +  L  W  S R  +P
Sbjct: 158 ISEVHLKRLDGLGMYSTIQQYIVTTKEAICSAVMEDLHEWLFSIRQKLP 206


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,173,708
Number of Sequences: 5004
Number of extensions: 67149
Number of successful extensions: 260
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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