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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0815
         (751 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)             141   5e-34
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)             140   1e-33
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)                   86   3e-17
SB_17563| Best HMM Match : DEAD (HMM E-Value=0)                        83   3e-16
SB_2247| Best HMM Match : DEAD (HMM E-Value=0)                         83   3e-16
SB_32980| Best HMM Match : DEAD (HMM E-Value=0)                        74   1e-13
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)              63   3e-10
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)               62   5e-10
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)              62   6e-10
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)                    58   8e-09
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)              58   8e-09
SB_9558| Best HMM Match : DEAD (HMM E-Value=0)                         57   1e-08
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)              57   2e-08
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)              57   2e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)                  56   2e-08
SB_52320| Best HMM Match : DEAD (HMM E-Value=0)                        56   3e-08
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   4e-07
SB_37351| Best HMM Match : DEAD (HMM E-Value=0)                        50   2e-06
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   2e-06
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)                  49   4e-06
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)              49   5e-06
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)                  48   8e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)              48   1e-05
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)                   45   8e-05
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)               45   8e-05
SB_43842| Best HMM Match : RNB (HMM E-Value=0)                         42   4e-04
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)                      42   4e-04
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)                  42   5e-04
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)               39   0.005
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)                  36   0.027
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)            34   0.11 
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)                      34   0.11 
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)            34   0.11 
SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.33 
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)                  32   0.43 
SB_21584| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.76 
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)                  30   2.3  
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)            29   4.0  
SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.3  
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)                29   5.3  
SB_17830| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.0  
SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.0  
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)                  28   9.3  
SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.3  
SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.3  
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)                   28   9.3  

>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 478

 Score =  141 bits (342), Expect = 5e-34
 Identities = 69/97 (71%), Positives = 83/97 (85%), Gaps = 6/97 (6%)
 Frame = +2

Query: 236 TRNNALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE------CQALILAPTRELAQ 397
           T+N+ +L  RDVIAQAQSGTGKTATF+ISILQ+IDT+ ++      CQAL+LAPTRELAQ
Sbjct: 114 TKNHYVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQ 173

Query: 398 QIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 508
           QIQKVV+ALGD+++ KCHACIGGTNVRED  +LE GV
Sbjct: 174 QIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGV 210



 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 45/67 (67%), Positives = 50/67 (74%)
 Frame = +1

Query: 499 EWCYVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQV 678
           E  +V VGTPGRV+DMI R  L+   IKLFVLDEADEMLSRGF DQ +DV   L   VQV
Sbjct: 208 EGVHVVVGTPGRVFDMINRGVLNTRDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQV 267

Query: 679 ILLSATM 699
           +LLSATM
Sbjct: 268 VLLSATM 274



 Score = 85.4 bits (202), Expect = 4e-17
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = +3

Query: 117 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCSKD 263
           G   ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQRAI PC ++
Sbjct: 52  GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQE 100


>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 370

 Score =  140 bits (338), Expect = 1e-33
 Identities = 64/85 (75%), Positives = 78/85 (91%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430
           +L+GRDVIAQAQSGTGKTATFSIS+LQ IDT +RE QAL+L+PTRELA QIQKVV+ALGD
Sbjct: 31  ILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTRELANQIQKVVLALGD 90

Query: 431 HLNAKCHACIGGTNVREDIRQLESG 505
           +++ +CHACIGGTN+ EDIR+L+ G
Sbjct: 91  YMSVQCHACIGGTNIGEDIRKLDYG 115



 Score = 79.0 bits (186), Expect = 4e-15
 Identities = 36/64 (56%), Positives = 48/64 (75%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687
           ++  GTPGRV+DMI RR L   +IK+ VLDEADEML++GF +Q +DV + L    QV+LL
Sbjct: 117 HIVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLL 176

Query: 688 SATM 699
           SAT+
Sbjct: 177 SATL 180



 Score = 33.1 bits (72), Expect = 0.25
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = +3

Query: 207 GFEKPSAIQQRAIMPCSK 260
           GFEKPSAIQQRAI P  K
Sbjct: 16  GFEKPSAIQQRAIKPILK 33


>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
          Length = 120

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 37/53 (69%), Positives = 48/53 (90%)
 Frame = +2

Query: 347 IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
           +RE QAL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L+ G
Sbjct: 1   LREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYG 53


>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 37/81 (45%), Positives = 58/81 (71%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
           L GRD++A+A++GTGKTA + + +L++ DT+    QAL+L PTRELA Q  ++ I LG H
Sbjct: 82  LAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKH 141

Query: 434 LNAKCHACIGGTNVREDIRQL 496
           + A+     GGT++++DI +L
Sbjct: 142 MGAQVMVTTGGTSLKDDILRL 162



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 23/63 (36%), Positives = 38/63 (60%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687
           +V V TPGRV D++ ++    +  ++ V+DEAD++LS  F      + K L  + Q++L 
Sbjct: 174 HVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLF 233

Query: 688 SAT 696
           SAT
Sbjct: 234 SAT 236



 Score = 38.7 bits (86), Expect = 0.005
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           F+D  LK ELL GI+  GF+KPS IQ+ +I
Sbjct: 49  FEDYCLKRELLMGIFEKGFDKPSPIQEESI 78


>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 37/81 (45%), Positives = 58/81 (71%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
           L GRD++A+A++GTGKTA + + +L++ DT+    QAL+L PTRELA Q  ++ I LG H
Sbjct: 82  LAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKH 141

Query: 434 LNAKCHACIGGTNVREDIRQL 496
           + A+     GGT++++DI +L
Sbjct: 142 MGAQVMVTTGGTSLKDDILRL 162



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 23/63 (36%), Positives = 38/63 (60%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687
           +V V TPGRV D++ ++    +  ++ V+DEAD++LS  F      + K L  + Q++L 
Sbjct: 174 HVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLF 233

Query: 688 SAT 696
           SAT
Sbjct: 234 SAT 236



 Score = 38.7 bits (86), Expect = 0.005
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           F+D  LK ELL GI+  GF+KPS IQ+ +I
Sbjct: 49  FEDYCLKRELLMGIFEKGFDKPSPIQEESI 78


>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 985

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 439
           G D+IAQA+SGTGKT  FS+  L+ + T     Q +IL PTRE+A Q++ V+ A+G H +
Sbjct: 50  GLDLIAQAKSGTGKTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYD 109

Query: 440 A-KCHACIGGTNVREDIRQLES 502
              C   IGG ++ ED + L+S
Sbjct: 110 GLACKVFIGGISLEEDKKALKS 131



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 24/64 (37%), Positives = 41/64 (64%)
 Frame = +1

Query: 505 CYVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVIL 684
           C++ VGTPGRV  +I ++ L   ++++F+LDEAD++L   F  Q + +   L  + Q++ 
Sbjct: 132 CHIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMA 191

Query: 685 LSAT 696
            SAT
Sbjct: 192 FSAT 195



 Score = 32.7 bits (71), Expect = 0.33
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +3

Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           F  + L   LLRG+   GFEKPS IQ +AI
Sbjct: 15  FHSLLLSPTLLRGLNEAGFEKPSPIQLKAI 44


>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1039

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIAL 424
           ++ G+DV+A A++G+GKTA F I + +++ T   +   +ALIL+PTRELA Q QK +  L
Sbjct: 315 VMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKEL 374

Query: 425 GDHLNAKCHACIGGTNV 475
           G     K    +GG +V
Sbjct: 375 GRFTGLKSSVILGGDSV 391


>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
          Length = 238

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 31/71 (43%), Positives = 45/71 (63%)
 Frame = +2

Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 442
           +DVI  A++G+GKT  F++ ILQ +  + +   ALIL PTRELA QI +   ALG  +  
Sbjct: 2   KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGV 61

Query: 443 KCHACIGGTNV 475
           KC   +GG ++
Sbjct: 62  KCAVIVGGIDM 72



 Score = 33.9 bits (74), Expect = 0.14
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGF--XDQXHDVXKMLSA 666
           ++ + TPGR+ D +   +     T+K  V+DEAD +L+  F   D  H V +   A
Sbjct: 84  HIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRILNMDFEKEDYIHRVGRTARA 139


>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 797

 Score = 61.7 bits (143), Expect = 6e-10
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQALILAPTRELAQQIQKVV 415
           ++ GRD++A AQ+G+GKTA + + +L     Q ++   R   AL +APTRELA+QI    
Sbjct: 513 VMAGRDLMACAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEA 572

Query: 416 IALGDHLNAKCHACIGGTNVREDIRQLESG 505
               DH   K   C GG +V     QLE G
Sbjct: 573 RKFSDHTPIKVCVCYGGVSVPYQASQLERG 602



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = +1

Query: 505 CYVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXH 642
           C+  VGTPGR+ D ++R  ++  +I+  +LDEAD ML  GF    H
Sbjct: 603 CHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPDIH 648


>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
          Length = 475

 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 436
           G D+I QA+SG GKTA F ++ LQQ++    +   L++  TRELA QI K       ++ 
Sbjct: 84  GMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMS 143

Query: 437 NAKCHACIGGTNVREDIRQLES 502
           N K     GG N+++D + L++
Sbjct: 144 NIKIAVFFGGINIKKDQQTLKT 165



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
           ++ VGTPGR+  +   + L+    K F+LDE D+ML +
Sbjct: 169 HIVVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQ 206



 Score = 32.3 bits (70), Expect = 0.43
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = +3

Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           F D  LK ELLR I   GFE PS +Q   I
Sbjct: 49  FRDFLLKPELLRAIVDCGFEHPSEVQHECI 78


>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 208

 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = +2

Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 436
           G D+I QA+SG GKTA F ++ LQQ++    +   L++  TRELA QI K       ++ 
Sbjct: 84  GMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMS 143

Query: 437 NAKCHACIGGTNVREDIRQLES 502
           N K     GG N+++D + L++
Sbjct: 144 NIKIAVFFGGINIKKDQQTLKT 165



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
           ++ VGTPGR+  +   + L+    K F+LDE D+ML +
Sbjct: 169 HIVVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQ 206



 Score = 32.3 bits (70), Expect = 0.43
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = +3

Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           F D  LK ELLR I   GFE PS +Q   I
Sbjct: 49  FRDFLLKPELLRAIVDCGFEHPSEVQHECI 78


>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 436

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 32/82 (39%), Positives = 47/82 (57%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430
           +LQGRD I  A++G+GKTA F++ ILQ++        A++L PTRELA QI      LG 
Sbjct: 41  ILQGRDCIGCAKTGSGKTAAFALPILQKLCDDPYGIFAVVLTPTRELAFQIADQFKVLGR 100

Query: 431 HLNAKCHACIGGTNVREDIRQL 496
            +  K    +GG ++ +    L
Sbjct: 101 PIGLKEAVIVGGLDMMKQALSL 122



 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 508 YVXVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVIL 684
           +V + TPGR+ D I +   L+   I+  VLDEAD +L   F D    +   +    Q +L
Sbjct: 127 HVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLL 186

Query: 685 LSATM 699
            SAT+
Sbjct: 187 FSATL 191


>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
          Length = 490

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 27/56 (48%), Positives = 40/56 (71%)
 Frame = +2

Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
           ++IAQ+QSGTGKTA F +++L ++D +    Q + L+PT ELA+Q  KV  A+G H
Sbjct: 144 NMIAQSQSGTGKTAAFVLTMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKH 199



 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
 Frame = +1

Query: 490 PTGEWC--YVXVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLS-RGFXDQXHDVXKM 657
           P G+ C  ++ +GTPG + D I + +      + +FVLDEAD M++ +G  DQ   + K 
Sbjct: 215 PRGQKCTDHIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKS 274

Query: 658 LSADVQVILLSAT 696
           L  D QV+L SAT
Sbjct: 275 LHKDCQVLLFSAT 287



 Score = 35.5 bits (78), Expect = 0.046
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 150 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           ++F+++ L   L RG+Y  GF KPS IQ+ A+
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETAL 134


>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1170

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
 Frame = +2

Query: 251  LLQGRDVIAQAQSGTGKTATFSISILQQI------DTSIREC---QALILAPTRELAQQI 403
            ++ GRDV+A AQ+G+GKTA F + ++  +       +S  E    QA+ +APTRELA QI
Sbjct: 745  VIAGRDVMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQI 804

Query: 404  QKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
                         +   C GG +V   +RQL+SG
Sbjct: 805  YLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSG 838



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +1

Query: 505  CYVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKML----SADV 672
            C + VGTPGR+ D I +  +    ++  +LDEAD ML  GF      + + +     ++ 
Sbjct: 839  CNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRMLDMGFEPAIRRIVESMGMPDKSER 898

Query: 673  QVILLSAT 696
            Q ++ SAT
Sbjct: 899  QTLMFSAT 906


>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
          Length = 428

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI---------DTSIRECQALILAPTRELAQQIQ 406
           LQ RD+I  A++G+GKTA F+I +L  I         + + +   ALILAPTRELAQQI+
Sbjct: 136 LQNRDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIE 195

Query: 407 KVVIALGDHLNAKCHACIGGTN 472
           + ++  G  L  +  + IGG +
Sbjct: 196 EEILKFGRPLGIRTVSVIGGAD 217


>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 340

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQ----QIDTSIRECQALILAPTRELAQQIQKVVIA 421
           L GRDV+  A++G+GKT  F I I++    Q  TS+    AL+++PTRELA Q  +V++ 
Sbjct: 85  LSGRDVLGAAKTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVK 144

Query: 422 LGDHLNAKCHACIGGTNVREDIRQL 496
           +G+  +      IGG +++ + +++
Sbjct: 145 IGNKHDLSAGLIIGGKDLKNEQKRI 169



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILL 687
           + V TPGR+   +         ++++ VLDEAD +L  GF    + + + L ++ Q +L 
Sbjct: 174 IVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLY 233

Query: 688 SAT 696
           SAT
Sbjct: 234 SAT 236


>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 790

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFS----ISILQQIDTSIRECQ-ALILAPTRELAQQIQKVVI 418
           L GRD+I  A++G+GKTA F     + I+ Q +  + +    LI APTREL QQI     
Sbjct: 552 LSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEAR 611

Query: 419 ALGDHLNAKCHACIGGTNVREDIRQLESG 505
             G   N    A  GG N  E  + L+ G
Sbjct: 612 RFGKAYNIHVVAVFGGGNKYEQSKALQEG 640



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 499 EWCYVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGF 627
           E   + V TPGR+ D +  +A + + +   V DEAD M   GF
Sbjct: 639 EGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGF 681


>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 688

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
 Frame = +2

Query: 233 ATRNNALLQGRDVIAQAQSGTGKTATFSISILQQI-DTSI-----RECQALILAPTRELA 394
           A+  N +  G DVI QA++GTGKT +F++ +++++ D  +     R  + L++APTRELA
Sbjct: 101 ASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELA 160

Query: 395 QQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 508
           +Q+      L  +L   C    GG         + SG+
Sbjct: 161 KQVGNEFENLKSNLEVYC--IYGGMPYEPQENAINSGL 196



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSAD-----VQ 675
           V VGTPGR+ D + +  L  + +K  VLDE D ML  GF +   +V     A+      Q
Sbjct: 198 VLVGTPGRILDFMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQ 257

Query: 676 VILLSATM 699
            +L SAT+
Sbjct: 258 TLLFSATL 265


>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1448

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQ---QIDTSIRE-CQALILAPTRELAQQIQKVVI 418
           LL+GRD++  A++G+GKT  F + +++   ++    R     +I++PTREL+ Q   V  
Sbjct: 606 LLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVAR 665

Query: 419 ALGDHLNAKCHACIGGTNVREDIRQLESGV 508
            L  H N      +GG N + +  +L+ GV
Sbjct: 666 DLLKHHNFTYGIIMGGVNRKAEAERLQKGV 695



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = +1

Query: 517 VGTPGRVYDMI--TRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLS 690
           + TPGR+ D +  T+  L+ N ++  V+DEAD +L  GF ++   + ++L +  Q +L S
Sbjct: 699 IATPGRLLDHLQNTQGFLYKN-LQCLVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFS 757

Query: 691 AT 696
           AT
Sbjct: 758 AT 759


>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
          Length = 690

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLS 690
           + + TPGR+ DM+  R  +       VLDEAD ML  GF  Q   +   +  D Q ++ S
Sbjct: 185 ICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWS 244

Query: 691 AT 696
           AT
Sbjct: 245 AT 246



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 22/48 (45%), Positives = 29/48 (60%)
 Frame = +2

Query: 365 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 508
           L+L PTRELAQQ+Q+V  ++G H   +     GG      IR+LE GV
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGV 183


>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1375

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
 Frame = +1

Query: 505  CYVXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXH---DVXKMLSADV- 672
            C++ V TPGR+ DM+ R  +  ++I+  VLDEAD ML  GF  Q     D   M    + 
Sbjct: 976  CHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGIR 1035

Query: 673  QVILLSAT 696
            Q ++ SAT
Sbjct: 1036 QTLMFSAT 1043



 Score = 32.7 bits (71), Expect = 0.33
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = +2

Query: 263 RDVIAQAQSGTGKTATFSISILQQI 337
           RD++A AQ+G+GKTA F I IL +I
Sbjct: 913 RDLMACAQTGSGKTAAFLIPILSRI 937



 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +3

Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
           F+D++L E LL  +   G++KP+ +Q+ AI
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI 906


>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
          Length = 500

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 25/63 (39%), Positives = 37/63 (58%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLS 690
           V V TPGR+ ++I+R+A+    +   V+DE D ML  GF  Q   + + LS   Q +L S
Sbjct: 258 VIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFS 317

Query: 691 ATM 699
           AT+
Sbjct: 318 ATI 320


>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 697

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 19/103 (18%)
 Frame = +2

Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDT--------------SIRECQ-----ALI 370
           ALL  RD+I  A++G+GKT  F I I+Q I+               S  E Q     ALI
Sbjct: 164 ALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALI 223

Query: 371 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 499
           +APTRELA Q++  ++    + + K  A +GG    +  R L+
Sbjct: 224 MAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLK 266


>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
          Length = 96

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQ 400
           L G+DV A A +GTGKTA F + IL+++    T     + L++ PTRELA Q
Sbjct: 45  LMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAIRVLVITPTRELAIQ 96


>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 45

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 434 LNAKCHACIGGTNVREDIRQLESGV 508
           ++ KCHACIGGTNVRED  +LE GV
Sbjct: 1   MHVKCHACIGGTNVREDRMKLEEGV 25



 Score = 31.9 bits (69), Expect = 0.57
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +1

Query: 499 EWCYVXVGTPGRVYDMITRRAL 564
           E  +V VGTPGRV+DMI R  L
Sbjct: 23  EGVHVVVGTPGRVFDMINRGVL 44


>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
          Length = 1238

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
 Frame = +2

Query: 245 NALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPTRELAQQI 403
           + ++ GRD+I  A++G+GKT  +S+ +   + T           ALIL PTREL QQ+
Sbjct: 104 SCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161


>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
          Length = 210

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +1

Query: 562 LHANTIKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQ 675
           L   +IK+ VLDEADEML++GF +Q +DV + L    Q
Sbjct: 31  LDTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68


>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
          Length = 635

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFXD 633
           +  GTPG++ D IT   +  + +K F+LDEAD +L++G  D
Sbjct: 138 IVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNND 178


>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 592

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +2

Query: 350 RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
           R+  A+++ PTRELA QI +         N +C    GGT + E I +L+ G
Sbjct: 143 RDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRG 194



 Score = 35.1 bits (77), Expect = 0.061
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRGFXDQ 636
           + V TPGR+ DM+T    R  +       VLDEAD M   GF  Q
Sbjct: 197 IIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQ 241


>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
          Length = 978

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
 Frame = +2

Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTS---------IRECQALILAPTRELAQQI 403
           ++    VI  AQ+G+GKT  +   ++ ++            ++  +A I+ P RELA QI
Sbjct: 412 IIHRHHVICAAQTGSGKTLAYLAPLVHRLREDEERHGILARLKRPRACIVVPARELATQI 471

Query: 404 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 508
            K   +L  H   +    IGG   +     LES V
Sbjct: 472 LKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPV 506


>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
          Length = 445

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 580 KLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLSATM 699
           +  VLDEAD M+  GF +    +     +  Q +L SATM
Sbjct: 18  RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATM 57


>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
          Length = 127

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +1

Query: 577 IKLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLSAT 696
           +++ VLDEAD ML  GF      V   L A  Q +L SAT
Sbjct: 4   VEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSAT 43


>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
          Length = 212

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 580 KLFVLDEADEMLSRGFXDQXHDVXKMLSADVQVILLSATM 699
           +  VLDEAD M+  GF +    +     +  Q +L SATM
Sbjct: 18  RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATM 57


>SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 124

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +3

Query: 27  ERRSEDWPEDSKNGPSKDQGSYD---GPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGI 197
           E+ +E+  E +K   + D+G      GPPG   GT     D VVE  DD   K E   G 
Sbjct: 19  EKTAEEMRELAKKAEACDRGVRAILLGPPGSGKGTQLVSDDLVVELIDDNLTKPECQNGW 78

Query: 198 YAYGFEKPSA 227
              GF +  A
Sbjct: 79  LLDGFPRTVA 88


>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
          Length = 559

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +2

Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELA-QQIQKVVIALGD 430
           + ++ ++++GTGK+  F   +L  +    R    +I+ PTRELA Q + +V   LGD
Sbjct: 198 KSLLIKSETGTGKSLVF---LLPSVQDPGRGYGTIIVVPTRELASQMLYEVSRLLGD 251


>SB_21584| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1750

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
 Frame = -2

Query: 351 RMLVSICCRIDIEKVAVFPVPDWA*AITSRPWSKALLRVAGLQKVFQNHR-RICLSTILL 175
           R+ VS+ C  ++  +  FP+PD    +  RPW K  +R   L  VF   +    + +   
Sbjct: 652 RLNVSLSCP-ELSVMLRFPIPDLRPVVERRPWWKQAVRDESLLLVFSAFKFNTVVCSADP 710

Query: 174 *GSCHRRFRQLDP-SRCQVSQGPFPEVHRNYL 82
             S   RF+Q+D   +      P P +H + L
Sbjct: 711 AASYELRFQQMDGYYKESAGATPIPVMHSSPL 742


>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
          Length = 456

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTS 346
           +LL+GRDV   A  G+GK   + + I+ QI  S
Sbjct: 220 SLLRGRDVAGVAIEGSGKRLAYLLPIIHQITES 252


>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4072

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +3

Query: 66   GPSKDQG-SYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRG 194
            GP  +QG S  GPPG  PG   T W+  +      N   E LRG
Sbjct: 3363 GPKGEQGRSISGPPG-PPGAPGTSWNDSIVNGGLSNSLLESLRG 3405


>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
          Length = 1058

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
 Frame = +1

Query: 511 VXVGTPGRVYDMITRR--ALHANTIKLFVLDEADEMLSR---GFXDQXHDVXKMLS-ADV 672
           + V TP R+  ++T+    +  + ++  +LDEAD++      GF +Q   + +  +  D+
Sbjct: 259 ILVTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDI 318

Query: 673 QVILLSATM 699
              L SAT+
Sbjct: 319 HRGLFSATL 327


>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 512

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +2

Query: 332 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 460
           Q D++++E    IL    ELA++IQK++      LN K  AC+
Sbjct: 58  QGDSTLKEPVQKILIIGLELAKEIQKLIDEASSGLNIKHAACL 100


>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
          Length = 2059

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3

Query: 9    NMSYSSERRSEDWPEDSKNGPSKDQGSYDGP 101
            +M Y SER     P D    P+ D GS D P
Sbjct: 1171 SMEYDSERHPYQAPADEMVNPNTDGGSRDNP 1201


>SB_17830| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 125

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 293 FLTGLER*HRVLGARHYCALLDCRRFFKTIGVYASQQFFFEVH 165
           FLT   R +++   RH C   D   F K    Y   +FFF+VH
Sbjct: 80  FLTFATRLYKLSEPRHIC--WDETHFGKHANFYIKGEFFFDVH 120


>SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 248

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 448 AFSIQVITKSYHHLLNLLGQLSCGSQDQSLTFTNACID 335
           A ++Q +TK+Y HL+N+ G      +++    T  C D
Sbjct: 201 AHALQTLTKAYRHLMNVTGN---RDKEEKANATEQCAD 235


>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
          Length = 532

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 355
           + G DV+A + SGT K + F   ++++ D+  R+
Sbjct: 245 VNGSDVVANSSSGTVKRSLFLPEVMEENDSVFRD 278


>SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 51  EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 182
           +D  N  + D G+ D     D GT+D D D  V+  DD N   +
Sbjct: 71  DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 111


>SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 134

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 51  EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 182
           +D  N  + D G+ D     D GT+D D D  V+  DD N   +
Sbjct: 54  DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 94


>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
          Length = 829

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -3

Query: 203 GVYASQQFFFEVHVIEGFDNLIPVGVKC 120
           GVY     F   H + GF N IP   +C
Sbjct: 742 GVYLESNVFQNGHALVGFQNTIPASQEC 769


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,982,084
Number of Sequences: 59808
Number of extensions: 526853
Number of successful extensions: 2183
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2168
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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