Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0814
         (782 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0186 - 2077298-2078731                                           29   5.5  
12_02_1004 + 25202732-25202783,25202997-25203181,25203269-252035...    28   7.3  
12_02_0250 - 16432160-16432672,16432751-16433066,16433524-164339...    28   7.3  
10_01_0188 - 2086765-2087743,2087774-2088195                           28   7.3  
05_03_0622 - 16293341-16293350,16293783-16294063,16294343-162944...    28   7.3  
05_03_0362 - 12973488-12974251,12975346-12975580,12976410-129767...    28   7.3  
03_05_0064 - 20385290-20385346,20385452-20387133,20387266-203880...    28   7.3  
03_03_0188 + 15269347-15270213                                         28   9.6  

>10_01_0186 - 2077298-2078731
          Length = 477

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/58 (24%), Positives = 28/58 (48%)
 Frame = -2

Query: 682 NITKRFVYRTIKRYNEDSSVDDRLRSGRPRSVRTPAVIKAVKARIQKNPKRKQKLLAL 509
           ++  R     +K+Y E +S+DD+++  +   +R   V++    R   NP    +L  L
Sbjct: 11  DLINRLTSFLMKKYMESTSIDDKMKRLKELLLRVHIVVEEADGRCITNPMMLMQLKML 68


>12_02_1004 +
           25202732-25202783,25202997-25203181,25203269-25203509,
           25203617-25204022,25204618-25204795,25204875-25205387
          Length = 524

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 452 RAYRRKTGHRLNARLMDPRLKRCGALLKRYAGK 354
           R  RR+ GH L  RL+     R G  + RY  K
Sbjct: 12  RCSRREVGHNLRNRLVRTNFDRSGETVSRYFNK 44


>12_02_0250 -
           16432160-16432672,16432751-16433066,16433524-16433962,
           16434037-16434277,16434365-16434549,16434763-16434814
          Length = 581

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 452 RAYRRKTGHRLNARLMDPRLKRCGALLKRYAGK 354
           R  RR+ GH L  RL+     R G  + RY  K
Sbjct: 12  RCSRREVGHNLRNRLVRTNFDRSGETVSRYFNK 44


>10_01_0188 - 2086765-2087743,2087774-2088195
          Length = 466

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -2

Query: 682 NITKRFVYRTIKRYNEDSSVDDRLRSGRPRSVRTPAVIKAVKARIQKNPK 533
           ++  RF+   IK+Y   +  DD+ +  +   +R  AV++    R   NPK
Sbjct: 11  DLMSRFMSFLIKKYTVTTVKDDKTKRMKELLLRVHAVVEEADGRCITNPK 60


>05_03_0622 -
           16293341-16293350,16293783-16294063,16294343-16294474,
           16294561-16294741,16295054-16295096,16295183-16295249,
           16296708-16296834,16296985-16297620,16298253-16298761,
           16298842-16299157,16299615-16300053,16300128-16300353,
           16300441-16300625,16300839-16300950,16301459-16301495,
           16301977-16302011,16302497-16302810,16303463-16303475
          Length = 1220

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 452 RAYRRKTGHRLNARLMDPRLKRCGALLKRYAGK 354
           R  RR+ GH L  RL+     R G  + RY  K
Sbjct: 165 RCSRREVGHNLRNRLVRTNFDRSGETVSRYFNK 197


>05_03_0362 -
           12973488-12974251,12975346-12975580,12976410-12976738,
           12977277-12977404,12977695-12977879,12977972-12978165,
           12978239-12978368,12978507-12978566,12979037-12979059,
           12979158-12979218,12979677-12979748,12979804-12979924,
           12980351-12980415,12980973-12981089,12981970-12982239
          Length = 917

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 246 RIPRVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEP 88
           RI  + + + P S   WLG  + GLT    C +    +   +   +L+NL EP
Sbjct: 81  RIGELMQNNLPYSC--WLGTCFLGLTFQECCNERFAESYSSWFEKILSNLQEP 131


>03_05_0064 -
           20385290-20385346,20385452-20387133,20387266-20388083,
           20388184-20388303,20389036-20389305,20390094-20390269
          Length = 1040

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -2

Query: 748 QFLRCIVAVTRPIQIFNILKILNITKRFVYRTIKRYNEDSSVDDRLRSGRPRS 590
           + LR  + + R ++  N  +  N+ K    RT++      SV +RLR+GRP S
Sbjct: 496 ELLRDCLIIWRRLKKDNCAEAENVKKTNTNRTVQ--TSKVSVSERLRNGRPSS 546


>03_03_0188 + 15269347-15270213
          Length = 288

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 102 SSGLYFDTQLHSFLHLSHKNVPLLSPNKKLPTIP 203
           SS  Y D+  H  LH S  +   +SP++  P  P
Sbjct: 44  SSSSYLDSPFHGLLHTSSSSSATMSPSQAPPPHP 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,985,849
Number of Sequences: 37544
Number of extensions: 432733
Number of successful extensions: 1189
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)