Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0814
(782 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59204| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_11746| Best HMM Match : RVT_1 (HMM E-Value=5e-31) 31 0.80
SB_44251| Best HMM Match : Transposase_5 (HMM E-Value=0.072) 31 1.4
SB_36553| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_12902| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_37643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_13875| Best HMM Match : rve (HMM E-Value=4.5e-15) 29 5.6
SB_3378| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_50401| Best HMM Match : Pkinase (HMM E-Value=1.7e-16) 28 7.4
SB_7868| Best HMM Match : Abhydrolase_1 (HMM E-Value=4e-16) 28 7.4
SB_46242| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_40621| Best HMM Match : DUF689 (HMM E-Value=7.8) 28 9.8
SB_19864| Best HMM Match : Baculo_p24 (HMM E-Value=1.7) 28 9.8
SB_19479| Best HMM Match : DUF689 (HMM E-Value=7.8) 28 9.8
SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77) 28 9.8
SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_32316| Best HMM Match : Baculo_p24 (HMM E-Value=1.2) 28 9.8
SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4) 28 9.8
SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) 28 9.8
SB_16430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_276| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_59204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 36.3 bits (80), Expect = 0.028
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -3
Query: 69 NNRHWVFQQDSAPAHRAKSTQDW 1
N R +F QD APAH AK++QDW
Sbjct: 162 NKRSMLFVQDGAPAHTAKASQDW 184
>SB_11746| Best HMM Match : RVT_1 (HMM E-Value=5e-31)
Length = 323
Score = 31.5 bits (68), Expect = 0.80
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -1
Query: 341 ILFSDEKIFTVEESYNKQNDKVYAHSSEERATV-FRVSNEVIFHP 210
IL++DE ++E + N + KVY + + T+ + SN VIFHP
Sbjct: 183 ILYADESGKSIETTVNNELFKVYNWLTANKLTLNIKKSNFVIFHP 227
>SB_44251| Best HMM Match : Transposase_5 (HMM E-Value=0.072)
Length = 221
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -1
Query: 506 MGLSRTTVKRVLNEDLGLRAYRRKTGHRLNARLMDPRLKRC 384
+G++R +++RVL DL L Y+ + H+L+ + R+ C
Sbjct: 107 LGMTRESLRRVLTSDLHLYPYKIQIKHKLSDADKEKRVTMC 147
>SB_36553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/50 (22%), Positives = 25/50 (50%)
Frame = -3
Query: 150 KGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDW 1
+G +A VY++ + N ++PV+HT + ++ +P +T +
Sbjct: 564 RGALNSAAVYKDPITMNTIDPVTHTNSASSDVTYKNHGSPYDEVTATSTY 613
>SB_12902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1585
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 307 KRATTNKMIRCTHTVVKNEQPYSACPTRSFSILA 206
K A + + +RC+H VVKNE + CP F A
Sbjct: 1406 KVALSWRCLRCSHVVVKNECSF-GCPAAGFRFAA 1438
>SB_37643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 555 REFKKIPNVSRNCWPLDGVKQNHGEKGVK*RLRASGISKKNRTS 424
R ++ VSR + + GV + + GV R SG+S++ TS
Sbjct: 148 RRYEISDGVSRRRYEISGVSRRYEISGVSRRYEISGVSRRYETS 191
>SB_13875| Best HMM Match : rve (HMM E-Value=4.5e-15)
Length = 1216
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 326 EKIFTVEESYNKQNDKVYAHSSEE-RATVFRVSNEVIF 216
E++FTV + YN N K YA+ E T F + +++
Sbjct: 325 EEVFTVGQRYNNTNQKRYAYRLREYDGTCFTLHEHIVW 362
>SB_3378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/50 (20%), Positives = 25/50 (50%)
Frame = -3
Query: 150 KGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDW 1
+G +A +Y++ + N ++PV+HT + ++ +P +T +
Sbjct: 4 RGALKSAALYEDPITMNTIDPVTHTNSASSDVTYKNHGSPYDEVTATSTY 53
>SB_50401| Best HMM Match : Pkinase (HMM E-Value=1.7e-16)
Length = 535
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 127 CVSKYSPDEPCGTCFS 80
C K+SPDE C TC S
Sbjct: 237 CAVKHSPDEICATCIS 252
>SB_7868| Best HMM Match : Abhydrolase_1 (HMM E-Value=4e-16)
Length = 289
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 317 KFFHPKKEFPDIFFPRTASTKRHISSVSG 403
K P ++FPD FFPR AS + V G
Sbjct: 94 KSIPPVRDFPDEFFPRDASDAGMLMKVLG 122
>SB_46242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 317 FTVEESYNKQNDKVYAHSSEERATVFRVSN-EVIFHP 210
F ++E + D + +HSS+E + V+R N V F+P
Sbjct: 37 FCIKELQDGDQDALISHSSKENSEVYRFENITVNFYP 73
>SB_40621| Best HMM Match : DUF689 (HMM E-Value=7.8)
Length = 176
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 317 FTVEESYNKQNDKVYAHSSEERATVFRVSN-EVIFHP 210
F ++E + D + +HSS+E + V+R N V F+P
Sbjct: 37 FCIKELQDGDQDALISHSSKENSEVYRFENITVNFYP 73
>SB_19864| Best HMM Match : Baculo_p24 (HMM E-Value=1.7)
Length = 222
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 317 FTVEESYNKQNDKVYAHSSEERATVFRVSN-EVIFHP 210
F ++E + D + +HSS+E + V+R N V F+P
Sbjct: 37 FCIKELQDGDQDALISHSSKENSEVYRFENITVNFYP 73
>SB_19479| Best HMM Match : DUF689 (HMM E-Value=7.8)
Length = 146
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 317 FTVEESYNKQNDKVYAHSSEERATVFRVSN-EVIFHP 210
F ++E + D + +HSS+E + V+R N V F+P
Sbjct: 37 FCIKELQDGDQDALISHSSKENSEVYRFENITVNFYP 73
>SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77)
Length = 393
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 455 ALSLHLTPFSPWFCLTPSKG 514
A + +TPFS WFC+ S G
Sbjct: 101 ACLIWITPFSRWFCMVSSPG 120
>SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1317
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 317 FTVEESYNKQNDKVYAHSSEERATVFRVSN-EVIFHP 210
F ++E + D + +HSS+E + V+R N V F+P
Sbjct: 37 FCIKELQDGDQDALISHSSKENSEVYRFENITVNFYP 73
>SB_32316| Best HMM Match : Baculo_p24 (HMM E-Value=1.2)
Length = 341
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 317 FTVEESYNKQNDKVYAHSSEERATVFRVSN-EVIFHP 210
F ++E + D + +HSS+E + V+R N V F+P
Sbjct: 37 FCIKELQDGDQDALISHSSKENSEVYRFENITVNFYP 73
>SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4)
Length = 335
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 317 FTVEESYNKQNDKVYAHSSEERATVFRVSN-EVIFHP 210
F ++E + D + +HSS+E + V+R N V F+P
Sbjct: 37 FCIKELQDGDQDALISHSSKENSEVYRFENITVNFYP 73
>SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)
Length = 1012
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 317 FTVEESYNKQNDKVYAHSSEERATVFRVSN-EVIFHP 210
F ++E + D + +HSS+E + V+R N V F+P
Sbjct: 37 FCIKELQDGDQDALISHSSKENSEVYRFENITVNFYP 73
>SB_16430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 317 FTVEESYNKQNDKVYAHSSEERATVFRVSN-EVIFHP 210
F ++E + D + +HSS+E + V+R N V F+P
Sbjct: 37 FCIKELQDGDQDALISHSSKENSEVYRFENITVNFYP 73
>SB_276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 694 LKILNITKRFVYRTIKRYNEDSSVDD-RLRSGRPRSV 587
+++L+++KRFVY+ + Y V+D R R R +
Sbjct: 4 VQVLSVSKRFVYKITRLYRNTRGVNDARKRKSEARLI 40
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,932,851
Number of Sequences: 59808
Number of extensions: 537993
Number of successful extensions: 1461
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -