Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0814
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical ... 63 2e-10
U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical pr... 36 0.043
AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical ... 36 0.043
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 36 0.043
AF101318-3|AAK68598.1| 336|Caenorhabditis elegans Seven tm rece... 32 0.40
Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical pr... 30 2.1
U80953-3|AAB52554.1| 350|Caenorhabditis elegans Abnormal dauer ... 30 2.1
U72884-1|AAC47389.1| 350|Caenorhabditis elegans DAF-7 protein. 30 2.1
U72883-1|AAC47390.1| 350|Caenorhabditis elegans dauer larva dev... 30 2.1
Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 29 3.7
AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical ... 29 5.0
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 28 6.6
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 28 6.6
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 28 6.6
Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical pr... 28 8.7
AL110479-28|CAJ76967.1| 213|Caenorhabditis elegans Hypothetical... 28 8.7
AL110479-27|CAB60322.2| 333|Caenorhabditis elegans Hypothetical... 28 8.7
>AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical
protein H28G03.4 protein.
Length = 459
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/79 (39%), Positives = 44/79 (55%)
Frame = -3
Query: 237 RVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRH 58
RVQR +P +MV+ G++ G T + F +G+K N Y + + T L+ P F
Sbjct: 246 RVQRTGYPKGIMVFAGITANGKTPLIFVPQGIKVNGNNYLDMLKTELM-PWVKKHFKKTK 304
Query: 57 WVFQQDSAPAHRAKSTQDW 1
W FQQD APAH+ K+ Q W
Sbjct: 305 WTFQQDGAPAHKHKNVQAW 323
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = -1
Query: 449 AYRRKTGHRLNARLMDPRLKRCGALLKRYAGKKYREILFSDEKIFTVEESYNKQNDKVYA 270
AY++ T L+ R R LL+R+ +R++LF+DEKIF +E+S+N QND+VYA
Sbjct: 180 AYKKSTCQFLSEAAKIKRKDRAMNLLRRFRNGAHRKVLFTDEKIFCIEQSFNTQNDRVYA 239
>U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical
protein R10H1.3 protein.
Length = 329
Score = 35.5 bits (78), Expect = 0.043
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = -3
Query: 210 SLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAP 31
++MVW + E+ F K N+ YQN + L + + H ++ + + FQQD+A
Sbjct: 179 TVMVWGAFTEKKKLEIQFVSS--KMNSTDYQNVLELELSKYLRH--YSRKDFRFQQDNAT 234
Query: 30 AHRAKSTQDW 1
H + ST+D+
Sbjct: 235 IHVSNSTRDY 244
>AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical
protein W07E6.6 protein.
Length = 329
Score = 35.5 bits (78), Expect = 0.043
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = -3
Query: 210 SLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAP 31
++MVW + E+ F K N+ YQN + L + + H ++ + + FQQD+A
Sbjct: 179 TVMVWGAFTEKKKLEIQFVSS--KMNSTDYQNVLELELSKYLRH--YSRKDFRFQQDNAT 234
Query: 30 AHRAKSTQDW 1
H + ST+D+
Sbjct: 235 IHVSNSTRDY 244
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 35.5 bits (78), Expect = 0.043
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = -3
Query: 210 SLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAP 31
++MVW + E+ F K N+ YQN + L + + H ++ + + FQQD+A
Sbjct: 309 TVMVWGAFTEKKKLEIQFVSS--KMNSTDYQNVLELELSKYLRH--YSRKDFRFQQDNAT 364
Query: 30 AHRAKSTQDW 1
H + ST+D+
Sbjct: 365 IHVSNSTRDY 374
>AF101318-3|AAK68598.1| 336|Caenorhabditis elegans Seven tm
receptor protein 69 protein.
Length = 336
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 255 FFTTVCVHLIILFVVALFYGKNFFIRKKNFPIFFSRVPLQQSATSLQSR 401
FF + +LI++F+ A FY KN F K I+FS + + SA + ++
Sbjct: 18 FFASTFTNLILIFLTA-FYVKNLFGTYKRMVIYFSTLGIVFSALEITAK 65
>Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical
protein F39H11.3 protein.
Length = 588
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = -3
Query: 234 VQRGHFPSSLMVWLGVSY-----WGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMF 70
+QR + VWL + Y W + + H K K +V +N V L + +S +
Sbjct: 89 LQRVFLTNEKKVWLLLDYAEHDLWHVIKHHRTAKSKKVPIMVPRNMVKNILFQILSGMHY 148
Query: 69 NNRHWVFQQDSAPAH 25
+ +WV +D PA+
Sbjct: 149 LHSNWVLHRDLKPAN 163
>U80953-3|AAB52554.1| 350|Caenorhabditis elegans Abnormal dauer
formation protein 7 protein.
Length = 350
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = -1
Query: 425 RLNARLMDPRLKRCGALLKRYAGKKYREILFSDEKIFTVEESYNKQNDKVYAHSSEERAT 246
+LN + LK +K + YR++L DE+ VE S+ D Y + +
Sbjct: 49 QLNMKEAPKGLKPMDPEMKSVYLEMYRDLLEKDEQDMGVEMSFYTAKDPSYGENPSQLVA 108
Query: 245 VFRVSNEV 222
F V+N++
Sbjct: 109 KFDVTNDL 116
>U72884-1|AAC47389.1| 350|Caenorhabditis elegans DAF-7 protein.
Length = 350
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = -1
Query: 425 RLNARLMDPRLKRCGALLKRYAGKKYREILFSDEKIFTVEESYNKQNDKVYAHSSEERAT 246
+LN + LK +K + YR++L DE+ VE S+ D Y + +
Sbjct: 49 QLNMKEAPKGLKPMDPEMKSVYLEMYRDLLEKDEQDMGVEMSFYTAKDPSYGENPSQLVA 108
Query: 245 VFRVSNEV 222
F V+N++
Sbjct: 109 KFDVTNDL 116
>U72883-1|AAC47390.1| 350|Caenorhabditis elegans dauer larva
development regulatorygrowth factor protein.
Length = 350
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = -1
Query: 425 RLNARLMDPRLKRCGALLKRYAGKKYREILFSDEKIFTVEESYNKQNDKVYAHSSEERAT 246
+LN + LK +K + YR++L DE+ VE S+ D Y + +
Sbjct: 49 QLNMKEAPKGLKPMDPEMKSVYLEMYRDLLEKDEQDMGVEMSFYTAKDPSYGENPSQLVA 108
Query: 245 VFRVSNEV 222
F V+N++
Sbjct: 109 KFDVTNDL 116
>Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 539 IFLNSRLHSFYHCWSPNRPRAT 604
I +++L FY WSP+RPR+T
Sbjct: 171 ITTHAKLGDFYLVWSPSRPRST 192
>AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical
protein Y39A3A.1 protein.
Length = 311
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2
Query: 676 TKRFVYRTIKRYNEDSSVDDRLRSGRPR 593
T +F + IK+ N D +DD+ RSGRPR
Sbjct: 14 TMKFWFEKIKKKNYD--LDDKPRSGRPR 39
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 664 VYRTIKRYNEDSSVDDRLRSGRPRSVRTPAVIKAVKARIQKNPKR 530
+++ IK+Y + SV R+ GRPR V T + + + +++P R
Sbjct: 13 IWKVIKKYQTEKSVALRISPGRPR-VTTHRMDRNILRSAREDPHR 56
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 664 VYRTIKRYNEDSSVDDRLRSGRPRSVRTPAVIKAVKARIQKNPKR 530
+++ IK+Y + SV R+ GRPR V T + + + +++P R
Sbjct: 42 IWKVIKKYQTEKSVALRISPGRPR-VTTHRMDRNILRSAREDPHR 85
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 664 VYRTIKRYNEDSSVDDRLRSGRPRSVRTPAVIKAVKARIQKNPKR 530
+++ IK+Y + SV R+ GRPR V T + + + +++P R
Sbjct: 42 IWKVIKKYQTEKSVALRISPGRPR-VTTHRMDRNILRSAREDPHR 85
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 664 VYRTIKRYNEDSSVDDRLRSGRPRSVRTPAVIKAVKARIQKNPKR 530
+++ IK+Y + SV R+ GRPR V T + + + +++P R
Sbjct: 42 IWKVIKKYQTEKSVALRISPGRPR-VTTHRMDRNILRSAREDPHR 85
>Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical
protein F19B6.4 protein.
Length = 695
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -1
Query: 416 ARLMDPRLKRCGALLKRYAGKKYREILFSDEKIFTVEESYNKQNDK-VYAHS--SEERAT 246
A+ +D RCG + ++ + K F E+ YNK+ +K V H +E++T
Sbjct: 328 AKQVDAFFGRCGYPIPKFVSSPDHFMRVISHKSFETEDDYNKRIEKIVLEHDIMKKEQST 387
Query: 245 VFRVSNEVIFHPRS 204
+S+ HP +
Sbjct: 388 HSTLSSSRREHPET 401
>Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical
protein R07E3.3 protein.
Length = 379
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 403 SIRRAFKRCPVFLRYARSPKSSFNTLFTVVLLNP 504
S+R F +C + R++ SP+ F + VV NP
Sbjct: 76 SLRLTFDQCAIEKRHSTSPRGLFLSTNVVVAFNP 109
>AL110479-28|CAJ76967.1| 213|Caenorhabditis elegans Hypothetical
protein Y105C5B.6b protein.
Length = 213
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = +3
Query: 159 NVPLLSPNKKLPTIP*ARMENDLVGHAEYGCSFFTTVCVHLIILFVVALFYGKNFFIRKK 338
N L N K IP + EN + F TVC++LII + +F + K
Sbjct: 50 NETQLYRNTKNGLIPRFKSENFIAVLFVIAGGFLATVCIYLIIAYCYLIFMLRKSSNAIK 109
Query: 339 NFPIFFSRVPLQQSATSL 392
N SR +++ L
Sbjct: 110 NTQFHKSRAVIKKKEVKL 127
>AL110479-27|CAB60322.2| 333|Caenorhabditis elegans Hypothetical
protein Y105C5B.6a protein.
Length = 333
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = +3
Query: 159 NVPLLSPNKKLPTIP*ARMENDLVGHAEYGCSFFTTVCVHLIILFVVALFYGKNFFIRKK 338
N L N K IP + EN + F TVC++LII + +F + K
Sbjct: 170 NETQLYRNTKNGLIPRFKSENFIAVLFVIAGGFLATVCIYLIIAYCYLIFMLRKSSNAIK 229
Query: 339 NFPIFFSRVPLQQSATSL 392
N SR +++ L
Sbjct: 230 NTQFHKSRAVIKKKEVKL 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,685,315
Number of Sequences: 27780
Number of extensions: 416929
Number of successful extensions: 1303
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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