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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0814
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098501-8|AAC67403.1|  459|Caenorhabditis elegans Hypothetical ...    63   2e-10
U23174-5|AAC46711.1|  329|Caenorhabditis elegans Hypothetical pr...    36   0.043
AF106576-3|AAK68401.1|  329|Caenorhabditis elegans Hypothetical ...    36   0.043
AC006671-2|AAO21381.1|  459|Caenorhabditis elegans Nuclear hormo...    36   0.043
AF101318-3|AAK68598.1|  336|Caenorhabditis elegans Seven tm rece...    32   0.40 
Z81079-3|CAB03083.2|  588|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U80953-3|AAB52554.1|  350|Caenorhabditis elegans Abnormal dauer ...    30   2.1  
U72884-1|AAC47389.1|  350|Caenorhabditis elegans DAF-7 protein.        30   2.1  
U72883-1|AAC47390.1|  350|Caenorhabditis elegans dauer larva dev...    30   2.1  
Z69634-3|CAA93454.4|  553|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AC006747-1|AAF60509.1|  311|Caenorhabditis elegans Hypothetical ...    29   5.0  
U39743-1|AAA80436.2|  314|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U29097-9|AAA68416.2|  343|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF125450-4|AAD12818.1|  343|Caenorhabditis elegans Hypothetical ...    28   6.6  
AF016682-7|AAB66191.2|  343|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z69635-6|CAA93461.1|  695|Caenorhabditis elegans Hypothetical pr...    28   8.7  
Z49207-9|CAA89068.2|  379|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AL110479-28|CAJ76967.1|  213|Caenorhabditis elegans Hypothetical...    28   8.7  
AL110479-27|CAB60322.2|  333|Caenorhabditis elegans Hypothetical...    28   8.7  

>AF098501-8|AAC67403.1|  459|Caenorhabditis elegans Hypothetical
           protein H28G03.4 protein.
          Length = 459

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 31/79 (39%), Positives = 44/79 (55%)
 Frame = -3

Query: 237 RVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRH 58
           RVQR  +P  +MV+ G++  G T + F  +G+K N   Y + + T L+ P     F    
Sbjct: 246 RVQRTGYPKGIMVFAGITANGKTPLIFVPQGIKVNGNNYLDMLKTELM-PWVKKHFKKTK 304

Query: 57  WVFQQDSAPAHRAKSTQDW 1
           W FQQD APAH+ K+ Q W
Sbjct: 305 WTFQQDGAPAHKHKNVQAW 323



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = -1

Query: 449 AYRRKTGHRLNARLMDPRLKRCGALLKRYAGKKYREILFSDEKIFTVEESYNKQNDKVYA 270
           AY++ T   L+      R  R   LL+R+    +R++LF+DEKIF +E+S+N QND+VYA
Sbjct: 180 AYKKSTCQFLSEAAKIKRKDRAMNLLRRFRNGAHRKVLFTDEKIFCIEQSFNTQNDRVYA 239


>U23174-5|AAC46711.1|  329|Caenorhabditis elegans Hypothetical
           protein R10H1.3 protein.
          Length = 329

 Score = 35.5 bits (78), Expect = 0.043
 Identities = 21/70 (30%), Positives = 37/70 (52%)
 Frame = -3

Query: 210 SLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAP 31
           ++MVW   +     E+ F     K N+  YQN +   L + + H  ++ + + FQQD+A 
Sbjct: 179 TVMVWGAFTEKKKLEIQFVSS--KMNSTDYQNVLELELSKYLRH--YSRKDFRFQQDNAT 234

Query: 30  AHRAKSTQDW 1
            H + ST+D+
Sbjct: 235 IHVSNSTRDY 244


>AF106576-3|AAK68401.1|  329|Caenorhabditis elegans Hypothetical
           protein W07E6.6 protein.
          Length = 329

 Score = 35.5 bits (78), Expect = 0.043
 Identities = 21/70 (30%), Positives = 37/70 (52%)
 Frame = -3

Query: 210 SLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAP 31
           ++MVW   +     E+ F     K N+  YQN +   L + + H  ++ + + FQQD+A 
Sbjct: 179 TVMVWGAFTEKKKLEIQFVSS--KMNSTDYQNVLELELSKYLRH--YSRKDFRFQQDNAT 234

Query: 30  AHRAKSTQDW 1
            H + ST+D+
Sbjct: 235 IHVSNSTRDY 244


>AC006671-2|AAO21381.1|  459|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 88, isoform b protein.
          Length = 459

 Score = 35.5 bits (78), Expect = 0.043
 Identities = 21/70 (30%), Positives = 37/70 (52%)
 Frame = -3

Query: 210 SLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAP 31
           ++MVW   +     E+ F     K N+  YQN +   L + + H  ++ + + FQQD+A 
Sbjct: 309 TVMVWGAFTEKKKLEIQFVSS--KMNSTDYQNVLELELSKYLRH--YSRKDFRFQQDNAT 364

Query: 30  AHRAKSTQDW 1
            H + ST+D+
Sbjct: 365 IHVSNSTRDY 374


>AF101318-3|AAK68598.1|  336|Caenorhabditis elegans Seven tm
           receptor protein 69 protein.
          Length = 336

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +3

Query: 255 FFTTVCVHLIILFVVALFYGKNFFIRKKNFPIFFSRVPLQQSATSLQSR 401
           FF +   +LI++F+ A FY KN F   K   I+FS + +  SA  + ++
Sbjct: 18  FFASTFTNLILIFLTA-FYVKNLFGTYKRMVIYFSTLGIVFSALEITAK 65


>Z81079-3|CAB03083.2|  588|Caenorhabditis elegans Hypothetical
           protein F39H11.3 protein.
          Length = 588

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
 Frame = -3

Query: 234 VQRGHFPSSLMVWLGVSY-----WGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMF 70
           +QR    +   VWL + Y     W + + H   K  K   +V +N V   L + +S   +
Sbjct: 89  LQRVFLTNEKKVWLLLDYAEHDLWHVIKHHRTAKSKKVPIMVPRNMVKNILFQILSGMHY 148

Query: 69  NNRHWVFQQDSAPAH 25
            + +WV  +D  PA+
Sbjct: 149 LHSNWVLHRDLKPAN 163


>U80953-3|AAB52554.1|  350|Caenorhabditis elegans Abnormal dauer
           formation protein 7 protein.
          Length = 350

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = -1

Query: 425 RLNARLMDPRLKRCGALLKRYAGKKYREILFSDEKIFTVEESYNKQNDKVYAHSSEERAT 246
           +LN +     LK     +K    + YR++L  DE+   VE S+    D  Y  +  +   
Sbjct: 49  QLNMKEAPKGLKPMDPEMKSVYLEMYRDLLEKDEQDMGVEMSFYTAKDPSYGENPSQLVA 108

Query: 245 VFRVSNEV 222
            F V+N++
Sbjct: 109 KFDVTNDL 116


>U72884-1|AAC47389.1|  350|Caenorhabditis elegans DAF-7 protein.
          Length = 350

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = -1

Query: 425 RLNARLMDPRLKRCGALLKRYAGKKYREILFSDEKIFTVEESYNKQNDKVYAHSSEERAT 246
           +LN +     LK     +K    + YR++L  DE+   VE S+    D  Y  +  +   
Sbjct: 49  QLNMKEAPKGLKPMDPEMKSVYLEMYRDLLEKDEQDMGVEMSFYTAKDPSYGENPSQLVA 108

Query: 245 VFRVSNEV 222
            F V+N++
Sbjct: 109 KFDVTNDL 116


>U72883-1|AAC47390.1|  350|Caenorhabditis elegans dauer larva
           development regulatorygrowth factor protein.
          Length = 350

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = -1

Query: 425 RLNARLMDPRLKRCGALLKRYAGKKYREILFSDEKIFTVEESYNKQNDKVYAHSSEERAT 246
           +LN +     LK     +K    + YR++L  DE+   VE S+    D  Y  +  +   
Sbjct: 49  QLNMKEAPKGLKPMDPEMKSVYLEMYRDLLEKDEQDMGVEMSFYTAKDPSYGENPSQLVA 108

Query: 245 VFRVSNEV 222
            F V+N++
Sbjct: 109 KFDVTNDL 116


>Z69634-3|CAA93454.4|  553|Caenorhabditis elegans Hypothetical
           protein B0001.5 protein.
          Length = 553

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 539 IFLNSRLHSFYHCWSPNRPRAT 604
           I  +++L  FY  WSP+RPR+T
Sbjct: 171 ITTHAKLGDFYLVWSPSRPRST 192


>AC006747-1|AAF60509.1|  311|Caenorhabditis elegans Hypothetical
           protein Y39A3A.1 protein.
          Length = 311

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 676 TKRFVYRTIKRYNEDSSVDDRLRSGRPR 593
           T +F +  IK+ N D  +DD+ RSGRPR
Sbjct: 14  TMKFWFEKIKKKNYD--LDDKPRSGRPR 39


>U39743-1|AAA80436.2|  314|Caenorhabditis elegans Hypothetical
           protein R173.2 protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -2

Query: 664 VYRTIKRYNEDSSVDDRLRSGRPRSVRTPAVIKAVKARIQKNPKR 530
           +++ IK+Y  + SV  R+  GRPR V T  + + +    +++P R
Sbjct: 13  IWKVIKKYQTEKSVALRISPGRPR-VTTHRMDRNILRSAREDPHR 56


>U29097-9|AAA68416.2|  343|Caenorhabditis elegans Hypothetical
           protein F18C5.7 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -2

Query: 664 VYRTIKRYNEDSSVDDRLRSGRPRSVRTPAVIKAVKARIQKNPKR 530
           +++ IK+Y  + SV  R+  GRPR V T  + + +    +++P R
Sbjct: 42  IWKVIKKYQTEKSVALRISPGRPR-VTTHRMDRNILRSAREDPHR 85


>AF125450-4|AAD12818.1|  343|Caenorhabditis elegans Hypothetical
           protein Y39F10A.4 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -2

Query: 664 VYRTIKRYNEDSSVDDRLRSGRPRSVRTPAVIKAVKARIQKNPKR 530
           +++ IK+Y  + SV  R+  GRPR V T  + + +    +++P R
Sbjct: 42  IWKVIKKYQTEKSVALRISPGRPR-VTTHRMDRNILRSAREDPHR 85


>AF016682-7|AAB66191.2|  343|Caenorhabditis elegans Hypothetical
           protein T07D3.8 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -2

Query: 664 VYRTIKRYNEDSSVDDRLRSGRPRSVRTPAVIKAVKARIQKNPKR 530
           +++ IK+Y  + SV  R+  GRPR V T  + + +    +++P R
Sbjct: 42  IWKVIKKYQTEKSVALRISPGRPR-VTTHRMDRNILRSAREDPHR 85


>Z69635-6|CAA93461.1|  695|Caenorhabditis elegans Hypothetical
           protein F19B6.4 protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = -1

Query: 416 ARLMDPRLKRCGALLKRYAGKKYREILFSDEKIFTVEESYNKQNDK-VYAHS--SEERAT 246
           A+ +D    RCG  + ++       +     K F  E+ YNK+ +K V  H    +E++T
Sbjct: 328 AKQVDAFFGRCGYPIPKFVSSPDHFMRVISHKSFETEDDYNKRIEKIVLEHDIMKKEQST 387

Query: 245 VFRVSNEVIFHPRS 204
              +S+    HP +
Sbjct: 388 HSTLSSSRREHPET 401


>Z49207-9|CAA89068.2|  379|Caenorhabditis elegans Hypothetical
           protein R07E3.3 protein.
          Length = 379

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 403 SIRRAFKRCPVFLRYARSPKSSFNTLFTVVLLNP 504
           S+R  F +C +  R++ SP+  F +   VV  NP
Sbjct: 76  SLRLTFDQCAIEKRHSTSPRGLFLSTNVVVAFNP 109


>AL110479-28|CAJ76967.1|  213|Caenorhabditis elegans Hypothetical
           protein Y105C5B.6b protein.
          Length = 213

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 21/78 (26%), Positives = 31/78 (39%)
 Frame = +3

Query: 159 NVPLLSPNKKLPTIP*ARMENDLVGHAEYGCSFFTTVCVHLIILFVVALFYGKNFFIRKK 338
           N   L  N K   IP  + EN +         F  TVC++LII +   +F  +      K
Sbjct: 50  NETQLYRNTKNGLIPRFKSENFIAVLFVIAGGFLATVCIYLIIAYCYLIFMLRKSSNAIK 109

Query: 339 NFPIFFSRVPLQQSATSL 392
           N     SR  +++    L
Sbjct: 110 NTQFHKSRAVIKKKEVKL 127


>AL110479-27|CAB60322.2|  333|Caenorhabditis elegans Hypothetical
           protein Y105C5B.6a protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 21/78 (26%), Positives = 31/78 (39%)
 Frame = +3

Query: 159 NVPLLSPNKKLPTIP*ARMENDLVGHAEYGCSFFTTVCVHLIILFVVALFYGKNFFIRKK 338
           N   L  N K   IP  + EN +         F  TVC++LII +   +F  +      K
Sbjct: 170 NETQLYRNTKNGLIPRFKSENFIAVLFVIAGGFLATVCIYLIIAYCYLIFMLRKSSNAIK 229

Query: 339 NFPIFFSRVPLQQSATSL 392
           N     SR  +++    L
Sbjct: 230 NTQFHKSRAVIKKKEVKL 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,685,315
Number of Sequences: 27780
Number of extensions: 416929
Number of successful extensions: 1303
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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