Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0813
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74473-2|CAA98949.2|  319|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z70212-6|CAA94166.1|  336|Caenorhabditis elegans Hypothetical pr...    29   3.6  

>Z74473-2|CAA98949.2|  319|Caenorhabditis elegans Hypothetical
           protein F56H9.1 protein.
          Length = 319

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -3

Query: 657 ITVKY-DPLVPLSTYKNNSSIDLTINLEHCKIP 562
           ITV +   L+ L  + NN++ D+ INL +C++P
Sbjct: 133 ITVTWLSTLIGLPGFDNNNNFDIIINLANCRVP 165


>Z70212-6|CAA94166.1|  336|Caenorhabditis elegans Hypothetical
           protein R04D3.8 protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
 Frame = -3

Query: 663 PIITVKYDPLVPLST---YKNNSSIDLTINLEHCKIPFNLYFRVYRSRW-K*SLYIIYKN 496
           P+    Y PL  LST   Y  +    LTI L    +   LYF++   RW K S   +   
Sbjct: 74  PVEVRSYGPLRILSTLTMYTCHQIFQLTILLSGISLIVTLYFKLMTLRWTKVSSITMILT 133

Query: 495 ILNYEIFFFWMCK 457
            L + I FF   K
Sbjct: 134 FLAFHIPFFLSTK 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,900,159
Number of Sequences: 27780
Number of extensions: 315552
Number of successful extensions: 616
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)