Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0812
         (534 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1151 - 10822616-10823863                                         29   1.8  
11_06_0719 + 26612152-26612856,26613102-26613110,26614272-26615198     28   4.1  
06_03_1374 - 29671511-29672252,29672452-29672558,29672904-29673245     27   7.2  
07_03_1453 - 26649922-26650064,26650148-26650244,26651260-266514...    27   9.5  
07_03_0814 + 21700274-21701923,21702282-21702434,21702563-217026...    27   9.5  

>07_01_1151 - 10822616-10823863
          Length = 415

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 412 GKQRTWRFT*TRIQTDQERNRHTF 341
           GKQ TW F  TR+   +ER+R TF
Sbjct: 194 GKQITWHFIKTRLAPIKERSRTTF 217


>11_06_0719 + 26612152-26612856,26613102-26613110,26614272-26615198
          Length = 546

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +3

Query: 99  MSQNIEGDQEEIVLQSLNILIDLVDYNKDM 188
           M +   GDQEE++L+   +L+D+V ++  +
Sbjct: 194 MEEEEGGDQEEVLLEEKKMLVDVVGFSTSL 223


>06_03_1374 - 29671511-29672252,29672452-29672558,29672904-29673245
          Length = 396

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 296 NVPTIVSILNKLKVNKGVPISFLISLYTSLSET 394
           N+P + S++  L  N  VP+S  I ++  L +T
Sbjct: 168 NLPLVKSLVQNLSANLHVPVSCKIRIFPRLEDT 200


>07_03_1453 -
           26649922-26650064,26650148-26650244,26651260-26651418,
           26651478-26651603
          Length = 174

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 165 DQLKYLMIATRSPPDPPRCF 106
           D   +L +A+  PP PPRCF
Sbjct: 60  DDYVHLRLASAPPPLPPRCF 79


>07_03_0814 +
           21700274-21701923,21702282-21702434,21702563-21702634,
           21702923-21703033
          Length = 661

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +2

Query: 314 SILNKLKVN-KGVPISFLISLYTSLSETPGPLL 409
           S+L+ L V+ + +P S L+S   SLS+ P PLL
Sbjct: 118 SLLHSLSVSGRLLPHSLLLSFPPSLSDPPSPLL 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,737,354
Number of Sequences: 37544
Number of extensions: 276656
Number of successful extensions: 754
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)