Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0812
(534 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30662-7|CAA83141.2| 566|Caenorhabditis elegans Hypothetical pr... 35 0.042
U22831-6|AAK20068.1| 579|Caenorhabditis elegans Hypothetical pr... 35 0.042
Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and c... 29 2.8
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical pr... 27 6.4
AY533304-1|AAS21306.1| 359|Caenorhabditis elegans BRE-2 protein. 27 6.4
AL110487-12|CAB54430.2| 308|Caenorhabditis elegans Hypothetical... 27 6.4
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 27 6.4
>Z30662-7|CAA83141.2| 566|Caenorhabditis elegans Hypothetical
protein T16H12.6 protein.
Length = 566
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 171 QPDQLKYLMIATRSPPDPPRCFATWQXRXIA 79
QPD KY +I TR P D CF W R +A
Sbjct: 236 QPDATKYEVIRTRQPMDAIVCFGGWASRGVA 266
>U22831-6|AAK20068.1| 579|Caenorhabditis elegans Hypothetical
protein F47D12.7 protein.
Length = 579
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 171 QPDQLKYLMIATRSPPDPPRCFATWQXRXIA 79
QPD KY +I TR P D CF W R +A
Sbjct: 249 QPDATKYEVIRTRQPMDAIVCFGGWASRGVA 279
>Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical
protein T23G5.5 protein.
Length = 615
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = -1
Query: 381 LVYRLIRNEIGTPLLTFSLFNIDTIVGTFSLLLAISGKAFRHSF**TAIYRAIFYRARSV 202
L+ + N I LT+ + T ++ A+SG +F IY+ + R ++
Sbjct: 525 LLSMITSNFINYQALTYQDYTYPTAANVIGIIFALSGASFIPL---VGIYKFVNARGNTI 581
Query: 201 KVV---QTYPCYNQPDQLKYLMIATRSP 127
T P +P+Q +Y+ I T P
Sbjct: 582 SEKWQRVTMPYRKRPNQTEYIPIPTTQP 609
>Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical
protein T23G5.5 protein.
Length = 615
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = -1
Query: 381 LVYRLIRNEIGTPLLTFSLFNIDTIVGTFSLLLAISGKAFRHSF**TAIYRAIFYRARSV 202
L+ + N I LT+ + T ++ A+SG +F IY+ + R ++
Sbjct: 525 LLSMITSNFINYQALTYQDYTYPTAANVIGIIFALSGASFIPL---VGIYKFVNARGNTI 581
Query: 201 KVV---QTYPCYNQPDQLKYLMIATRSP 127
T P +P+Q +Y+ I T P
Sbjct: 582 SEKWQRVTMPYRKRPNQTEYIPIPTTQP 609
>AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and
chloride-dependentantidepressant- and cocaine-sensitive
dopamine transporterprotein.
Length = 615
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = -1
Query: 381 LVYRLIRNEIGTPLLTFSLFNIDTIVGTFSLLLAISGKAFRHSF**TAIYRAIFYRARSV 202
L+ + N I LT+ + T ++ A+SG +F IY+ + R ++
Sbjct: 525 LLSMITSNFINYQALTYQDYTYPTAANVIGIIFALSGASFIPL---VGIYKFVNARGNTI 581
Query: 201 KVV---QTYPCYNQPDQLKYLMIATRSP 127
T P +P+Q +Y+ I T P
Sbjct: 582 SEKWQRVTMPYRKRPNQTEYIPIPTTQP 609
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical
protein F53H10.2 protein.
Length = 900
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +2
Query: 275 LMAKSKENVPT----IVSILNKLKVNKGVPISFLISLYTSLSETPGPLLS 412
L KS NVP+ I+++ ++L+ +G P++ T L TP P+L+
Sbjct: 270 LHKKSHHNVPSRKASIMALKSQLRTPRGTPLNISTVPGTELPYTPPPILA 319
>Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 480 RRLPTSDRLASPRRGQPTTPEGMESSGP 397
R P LASP++ T+P G+ SSGP
Sbjct: 39 RASPWPAALASPQQTTFTSPTGLSSSGP 66
>Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 480 RRLPTSDRLASPRRGQPTTPEGMESSGP 397
R P LASP++ T+P G+ SSGP
Sbjct: 39 RASPWPAALASPQQTTFTSPTGLSSSGP 66
>AY533304-1|AAS21306.1| 359|Caenorhabditis elegans BRE-2 protein.
Length = 359
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 153 ILIDLVDYNKDMSVQLLPILLYKISHDISPSI 248
I+IDL D ++S + + +LLY IS SP++
Sbjct: 153 IVIDLEDNYLNLSYKTISLLLYSISKTKSPNL 184
>AL110487-12|CAB54430.2| 308|Caenorhabditis elegans Hypothetical
protein Y39E4B.9 protein.
Length = 308
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 153 ILIDLVDYNKDMSVQLLPILLYKISHDISPSI 248
I+IDL D ++S + + +LLY IS SP++
Sbjct: 153 IVIDLEDNYLNLSYKTISLLLYSISKTKSPNL 184
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 169 LIITRICLYNFYRSCSIKYRTIYRRLSK 252
LI++R C + ++ KYR +YR K
Sbjct: 648 LILSRKCTFEIIKTAQSKYRKLYRNFRK 675
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,499,056
Number of Sequences: 27780
Number of extensions: 232215
Number of successful extensions: 609
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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