BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0812 (534 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 28 0.069 DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 3.4 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 7.9 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 27.9 bits (59), Expect = 0.069 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = -2 Query: 350 AHLY*PSACS--ISTLLLAHFPCS*PLAVKPSDTHFDRRRYIVRY 222 AH SACS LLL++ PC P + P D F+ ++I+ + Sbjct: 49 AHKVVLSACSSYFQKLLLSN-PCKHPTIIMPQDVCFNDLKFIIEF 92 >DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine receptor beta1subunit protein. Length = 520 Score = 22.2 bits (45), Expect = 3.4 Identities = 11/39 (28%), Positives = 18/39 (46%) Frame = +3 Query: 102 SQNIEGDQEEIVLQSLNILIDLVDYNKDMSVQLLPILLY 218 S GDQ + L + +DL DY K + ++ + Y Sbjct: 171 SWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINVPAY 209 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 21.0 bits (42), Expect = 7.9 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -3 Query: 64 LTALSRELISDTQHFNL 14 LTALSRE+IS N+ Sbjct: 29 LTALSREVISRQATINI 45 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 138,430 Number of Sequences: 438 Number of extensions: 2928 Number of successful extensions: 4 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 15090993 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -