Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0811
(767 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0544 - 18655186-18655567,18656835-18657151 80 2e-15
10_08_0543 - 18649894-18650233,18651446-18651981 77 1e-14
02_05_0089 - 25715637-25716333,25716481-25717238 75 6e-14
03_02_0826 + 11569961-11570301,11572220-11572454 71 1e-12
02_05_1047 + 33745656-33745964 70 2e-12
03_02_0079 + 5485090-5485238,5486066-5486137,5486764-5486840,548... 33 0.25
07_03_0382 + 17470508-17470807,17471449-17474517 30 2.3
12_01_0981 + 9931542-9931606,9931779-9933105 29 5.4
03_01_0314 - 2477593-2480685 29 5.4
04_04_0615 + 26633438-26633570,26633711-26633840,26634203-26634836 28 7.1
04_03_0459 + 16159015-16159771,16160251-16160365,16160478-161608... 28 7.1
01_06_0011 - 25559099-25559238,25559781-25559814,25560172-255603... 28 7.1
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 28 9.4
01_06_1827 + 40169001-40169263,40169358-40169472,40170090-401702... 28 9.4
>10_08_0544 - 18655186-18655567,18656835-18657151
Length = 232
Score = 80.2 bits (189), Expect = 2e-15
Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Frame = +1
Query: 283 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 462
+++ ELRQYDG+ +LMA+ G I+DVT+ FYGPGGPYA+F G+DA+R LA S
Sbjct: 73 EVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 132
Query: 463 TAPEKDYDDLSDLNSRKWNQ*GNGRNNLERIMIWSVDF*GLVKNPGTTRTKNPKKQTRP- 639
P+ D+S G G L+ + W F G GT + P + P
Sbjct: 133 -EPQDLTGDIS----------GLGPFELDALQDWEYKFMGKYVKVGTVKKTVPVEDGAPS 181
Query: 640 LSPTTT 657
SP TT
Sbjct: 182 TSPETT 187
>10_08_0543 - 18649894-18650233,18651446-18651981
Length = 291
Score = 77.4 bits (182), Expect = 1e-14
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = +1
Query: 283 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 462
++TA EL QYDG+ +LMA+ G I+DV++ FYGPGGPYA+F G+DA+R LA S
Sbjct: 146 EITAEELLQYDGSDPEKPLLMAIKGQIYDVSQSRLFYGPGGPYALFAGKDASRALAKMSF 205
Query: 463 TAPEKDYDDLSDLN 504
P+ DD+S L+
Sbjct: 206 -EPQDLTDDISGLS 218
>02_05_0089 - 25715637-25716333,25716481-25717238
Length = 484
Score = 74.9 bits (176), Expect = 6e-14
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +1
Query: 283 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFS 459
++T ELR YDG+ +LMA+ G I+DVT+ FYGPGGPYA+F GRDA+R LA S
Sbjct: 220 EVTEEELRVYDGSDPNKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGRDASRALAKMS 278
>03_02_0826 + 11569961-11570301,11572220-11572454
Length = 191
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = +1
Query: 283 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFS 459
++T +L YDG +L+A+ G ++DVTRG FYGP GPY++F GRDATR LA S
Sbjct: 81 EITLEQLAAYDGKDPAKPILIAIRGQVYDVTRGRLFYGPQGPYSLFAGRDATRALALMS 139
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRL 575
E+E +++WE++F+E Y VG L
Sbjct: 156 ELEVLQDWEDKFKERYPTVGHL 177
>02_05_1047 + 33745656-33745964
Length = 102
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = +1
Query: 283 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 462
++TA +LR YDG+ + ++V G ++DVT G FYGPGG YAVF GR+A+R L S
Sbjct: 4 ELTAAQLRAYDGSDPSKPIYVSVRGKVYDVTSGRGFYGPGGAYAVFAGREASRALGKMSK 63
Query: 463 TAPEKDYDDLSDLNSRK 513
+ DLS L+ ++
Sbjct: 64 DDADVS-GDLSGLSDKE 79
>03_02_0079 +
5485090-5485238,5486066-5486137,5486764-5486840,
5486946-5486989,5487583-5487639,5487640-5487686,
5488010-5488184,5489501-5489662,5489845-5489883
Length = 273
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 361 IFDVTRGNRFYGPGGPYAVFGG 426
+FDVT+G YGPGG Y F G
Sbjct: 52 VFDVTKGKSNYGPGGGYHHFAG 73
>07_03_0382 + 17470508-17470807,17471449-17474517
Length = 1122
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 259 KKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGN 384
KK+P K + AV LR+ + TQE + + GW FD RG+
Sbjct: 359 KKIPMAVKIIGAV-LRRKEQTQESWQRVYEFEGWSFDDLRGD 399
>12_01_0981 + 9931542-9931606,9931779-9933105
Length = 463
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/71 (28%), Positives = 27/71 (38%)
Frame = -1
Query: 458 ENVASPLVASLPPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVPSYCRSSTAVISF 279
EN+ + SL PP P N P N F +T+PP P + + +
Sbjct: 31 ENIEMTMTPSLVTTLPLPPPPP-NHIPTTERNTSVFFNTSTIPPPPPPHFPQPP----QY 85
Query: 278 RNLGSFFKEQP 246
L FF QP
Sbjct: 86 TPLNQFFPYQP 96
>03_01_0314 - 2477593-2480685
Length = 1030
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 327 GWQSVDGCEWVDIRCD*RESV 389
GW S C W +RCD R +V
Sbjct: 50 GWSSAPHCTWKGVRCDARGAV 70
>04_04_0615 + 26633438-26633570,26633711-26633840,26634203-26634836
Length = 298
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 522 VREWEEQFRENYDLVGR-LLRPGEEPRNYSDEEPEEADTSALPNDDKKTNLN 674
+R W + +++ R R +EP N SDE + T A P DD N
Sbjct: 197 LRLWNSEVGDSFRKSARSAAREDQEPANASDEAAPVSATFARPGDDSSAASN 248
>04_03_0459 +
16159015-16159771,16160251-16160365,16160478-16160844,
16160930-16161244,16161324-16161644,16161730-16161882
Length = 675
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +1
Query: 244 KGCSLKKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFG 423
+G + K PK ++ A E +G R +G+ V G+R P PY G
Sbjct: 220 RGHTYKHCPKDKEKPNAAEAGLSGSAVDGARPTDGTSGYTSVVGPGDRSPTPVSPYCGTG 279
Query: 424 GRD 432
G D
Sbjct: 280 GSD 282
>01_06_0011 -
25559099-25559238,25559781-25559814,25560172-25560333,
25560335-25560454
Length = 151
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 333 QSVDGCEWVDIRCD 374
Q VD C W D+RCD
Sbjct: 129 QDVDPCNWKDVRCD 142
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 140 ETLKTLFCQPFIYFVFVSTFVILYKFYYKYKTHCSKVAP 256
E +K + FVF S +L +FY + HC K+AP
Sbjct: 384 EPVKVVVADNVHDFVFKSGKNVLVEFYAPWCGHCKKLAP 422
>01_06_1827 +
40169001-40169263,40169358-40169472,40170090-40170201,
40170556-40170623,40170798-40170852,40170948-40171027,
40171811-40171924,40172178-40172296,40173064-40173181,
40173264-40173394,40173535-40173688,40173922-40174017
Length = 474
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -1
Query: 425 PPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVPSYCRSSTAVI 285
PP A PP P P+V TA TLPP P+ S++ +
Sbjct: 35 PPPPAPPPPPPPRLEPVVVVAPSTTTATATLPPIITPTLSPSTSTCL 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,047,626
Number of Sequences: 37544
Number of extensions: 456124
Number of successful extensions: 1405
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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