Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0811
(767 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49859| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 6e-21
SB_8772| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 7e-11
SB_42543| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_34186| Best HMM Match : Cyt-b5 (HMM E-Value=2.6e-13) 59 3e-09
SB_10760| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074) 32 0.44
SB_3502| Best HMM Match : zf-DBF (HMM E-Value=4.9) 30 1.8
SB_47817| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_59748| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_5506| Best HMM Match : rve (HMM E-Value=0.00062) 29 3.1
SB_1513| Best HMM Match : DUF1472 (HMM E-Value=2.9) 29 3.1
SB_20151| Best HMM Match : rve (HMM E-Value=2.9e-12) 29 3.1
SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0) 29 4.1
SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_23584| Best HMM Match : RVT_1 (HMM E-Value=0.0029) 29 4.1
SB_14491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_9088| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_49575| Best HMM Match : Laminin_G_2 (HMM E-Value=4.2) 29 5.5
SB_20667| Best HMM Match : Amelogenin (HMM E-Value=8.5) 29 5.5
SB_19477| Best HMM Match : GST_C (HMM E-Value=0.64) 29 5.5
SB_15622| Best HMM Match : Pec_lyase_N (HMM E-Value=2.9) 29 5.5
SB_12710| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_1255| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_50079| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_16593| Best HMM Match : rve (HMM E-Value=9.3e-16) 28 9.5
SB_8469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_49859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 98.3 bits (234), Expect = 6e-21
Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Frame = +1
Query: 268 PKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGL 447
P ++D T EL++YDG + VLMAVNG +FDVTRG FYGPGGPY+ F G DA+RGL
Sbjct: 55 PFKKRDFTLDELKEYDGLKSP-YVLMAVNGKVFDVTRGKDFYGPGGPYSNFAGHDASRGL 113
Query: 448 ATFSV--TAPEKDYDDLSDLNS------RKWNQ 522
ATFS+ A + +YDDLSDLN R+W Q
Sbjct: 114 ATFSLGPEAIKDEYDDLSDLNGMQQDSLREWEQ 146
Score = 58.0 bits (134), Expect = 8e-09
Identities = 25/42 (59%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNY-SDEEPEEAD 632
+ +S+REWE+QF E YDLVGRLL+PGE+ + Y ++EE EE D
Sbjct: 137 QQDSLREWEQQFDEKYDLVGRLLKPGEKHQQYETEEETEEED 178
>SB_8772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 64.9 bits (151), Expect = 7e-11
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Frame = +1
Query: 280 KDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFS 459
++ T EL+ YDG + + +AVNG +FDVT ++GP GP + G+DA+R L TFS
Sbjct: 72 REFTVRELKGYDGVNKE-LIYVAVNGKVFDVTSAWNYFGPAGPDCLLAGKDASRALVTFS 130
Query: 460 V-----TAPEKDYDDLSDLN 504
V T DDL+DLN
Sbjct: 131 VDNFYQTEQRDSMDDLNDLN 150
>SB_42543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/61 (40%), Positives = 39/61 (63%)
Frame = +1
Query: 286 MTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVT 465
++ V+L ++DG Q + +A+ G ++DV +G RFYGPG Y VF GRD+T T V+
Sbjct: 272 LSTVDLVKHDGLQPDANIYIAILGKVYDVEKGRRFYGPGTGYHVFAGRDSTPSFVTVLVS 331
Query: 466 A 468
+
Sbjct: 332 S 332
>SB_34186| Best HMM Match : Cyt-b5 (HMM E-Value=2.6e-13)
Length = 310
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +1
Query: 286 MTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVT 465
++ +L ++DG+Q + +A+ G ++DV +G RFYGPG Y VF GRD+T T +
Sbjct: 88 LSTEDLAKHDGSQPDANIYIAILGKVYDVEKGRRFYGPGTGYHVFAGRDSTPSFVT-GMF 146
Query: 466 APEKDYDDLSDLNS 507
K DD S+L +
Sbjct: 147 DRAKATDDCSNLKN 160
>SB_10760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 262 KLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATR 441
K+ K T EL ++G + +AV G +FDV+ YG G Y G++ +R
Sbjct: 40 KITPGHKLFTKDELATFNGRNSNSPIYVAVKGVVFDVSTSKDLYGYGESYNSMAGKECSR 99
Query: 442 GLATFSVTA 468
+A +S+ A
Sbjct: 100 AIAKWSLAA 108
>SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074)
Length = 180
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = -1
Query: 332 PPSCVPSYCRSSTAVISFRNLG----SFFKEQPLNNVSYTCSKIYTVSQM-YSQKQNK*T 168
PP CV YC +S VI+ R L S P++ +S + +YT S+ +++ K
Sbjct: 9 PPPCVGFYCEASPRVITIRTLNAHGWSNTATDPVSRLSLYHTSVYTQSRFDFNRAHQKMA 68
Query: 167 VDKTV 153
+KT+
Sbjct: 69 WEKTL 73
>SB_3502| Best HMM Match : zf-DBF (HMM E-Value=4.9)
Length = 476
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 600 NYSDEEPEEADTSALPNDDKKTNLN 674
NY+D PE+ D+S LP+ T LN
Sbjct: 12 NYTDRSPEDYDSSPLPSSAVSTELN 36
>SB_47817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + A +LC +LP Y + S++ F G + + C
Sbjct: 610 SNHAEYVVYRQNVVRARVLCATLLPVVYSVSLDSRYNELFTGRSLQSC 657
>SB_59748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + +++LC +LP Y + S++ F G + + C
Sbjct: 337 SNHAEYVVYRQNVLRSSVLCATLLPVVYSVSLDSRYNELFTGRSLQSC 384
>SB_5506| Best HMM Match : rve (HMM E-Value=0.00062)
Length = 390
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + +++LC +LP Y + S++ F G + + C
Sbjct: 307 SNHAEYVVYRQNVLRSSVLCATLLPVVYSVSLDSRYNELFTGRSLQSC 354
>SB_1513| Best HMM Match : DUF1472 (HMM E-Value=2.9)
Length = 317
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + + +LC +LP Y + S++ F G + + C
Sbjct: 234 SNHAEYLVYRQNVARSRVLCATLLPVVYSVSLVSRYNELFTGRSLQSC 281
>SB_20151| Best HMM Match : rve (HMM E-Value=2.9e-12)
Length = 438
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + + +LC +LP Y + S++ F G + + C
Sbjct: 355 SNHAEYVVYRQNMVRSRVLCAALLPVVYSVSLDSRYNELFTGRSLQSC 402
>SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 761
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +3
Query: 582 PGEEPRNYSDEEPEEADTSALPNDDKKTNLNFHCQMTVALPSKI----DQFVEHFASHLH 749
PG R S+ + E +D L K+ N + C++ P ++ DQ VE F+ LH
Sbjct: 646 PGSMTRLLSELDVESSDDEFL--QPKQENKSACCRVVKGRPIEVKPFRDQEVESFSPGLH 703
Query: 750 SLIG 761
L+G
Sbjct: 704 DLVG 707
>SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 235 CLILVVKFIQYHKCTHKNKINKRLTKQCF*GLKKATVFGLHI-FNLWW*IH 86
C I+ + F+QY CT + T +C +K + G+HI +L W +H
Sbjct: 477 CKIMDIDFLQYRACTWRPIYVGGTTLEC---VKSFKLLGIHISSDLTWDVH 524
>SB_23584| Best HMM Match : RVT_1 (HMM E-Value=0.0029)
Length = 511
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 235 CLILVVKFIQYHKCTHKNKINKRLTKQCF*GLKKATVFGLHI-FNLWW*IH 86
C I+ + F+QY CT + T +C +K + G+HI +L W +H
Sbjct: 407 CKIMDIDFLQYRACTWRPIYVGGTTLEC---VKSFKLLGIHISSDLTWDVH 454
>SB_14491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 298 LLRSYLFAI*VVFSRSNL*TMCLILVVKFIQYHKCTHKNKINKRLTKQCF 149
L R Y + +S SNL + L + K + HKC NK++ +TK F
Sbjct: 3 LTRMYAEDTTITYSASNLVELELQINSKLSKLHKCLLANKLSLNITKTEF 52
>SB_9088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + + +LC +LP Y + S++ F G + + C
Sbjct: 813 SNHAEYVVYRQNVVRSRVLCATLLPVVYSVSLDSRYNELFTGRSLQSC 860
>SB_49575| Best HMM Match : Laminin_G_2 (HMM E-Value=4.2)
Length = 580
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + + +LC +LP Y + S++ F G + + C
Sbjct: 444 SNHAEYVVYRQNVVRSRVLCATLLPVVYSVSLDSRYNELFTGRSLQSC 491
>SB_20667| Best HMM Match : Amelogenin (HMM E-Value=8.5)
Length = 168
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 595 PGTTRTKNPKKQTRPLSPTTTR 660
P TTR +NP P SPTTT+
Sbjct: 115 PQTTRQQNPPTINAPTSPTTTK 136
>SB_19477| Best HMM Match : GST_C (HMM E-Value=0.64)
Length = 1294
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNYSD 611
E + V R Y +G++++PGE+PR +
Sbjct: 665 EQDQVSRRTATLRSTYSRLGKIVKPGEQPRKVGE 698
>SB_15622| Best HMM Match : Pec_lyase_N (HMM E-Value=2.9)
Length = 511
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + +++LC +LP Y + S++ F G + + C
Sbjct: 330 SNHAEYVVHRQNVLRSSVLCATLLPVVYSVSLDSRYNELFTGRSLQSC 377
>SB_12710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 537 EQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPNDDKKTN 668
EQF +DLVG +L S+EE E+ +P ++ KTN
Sbjct: 19 EQFLPAFDLVGTILTTSRNISILSEEEVEKRKDDRIP-ENTKTN 61
>SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2085
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQCV 232
S+H EY + + LLC +L Y + S++ F G + + CV
Sbjct: 2001 SNHAEYVVYRQNVVRSRLLCATLLSVVYSVSLDSRYNELFTGRSLQSCV 2049
>SB_1255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + + +LC +LP Y + S++ F G + + C
Sbjct: 150 SNHAEYVVYRQNVVRSRVLCATLLPVVYSISLDSRYNELFTGRSLQSC 197
>SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1289
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + + +LC +LP Y + S++ F G + + C
Sbjct: 1206 SNHAEYVVYRQNVVRSRVLCATLLPVVYSVSLDSRYYELFTGRSLQSC 1253
>SB_50079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + +LC +LP Y + S++ F G + + C
Sbjct: 413 SNHAEYVVYRQNVVRPRVLCATLLPVVYSVSLDSRYNELFTGRSLQSC 460
>SB_16593| Best HMM Match : rve (HMM E-Value=9.3e-16)
Length = 783
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + +LC +LP Y + S++ F G + + C
Sbjct: 504 SNHAEYVVYRQNVVRTRVLCATLLPVVYSVSLDSRYNELFTGHSLQSC 551
>SB_8469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -3
Query: 378 SSHIEYPPIHSHQHSATLLCPVVLP*FYCGHIFSQFR*FFQGATFEQC 235
S+H EY + + +LC +LP Y + S++ F G + + C
Sbjct: 786 SNHAEYVVYRQNVVRSGVLCATLLPVVYSLSLDSRYNELFTGRSLQSC 833
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,461,945
Number of Sequences: 59808
Number of extensions: 534950
Number of successful extensions: 1507
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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