Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0811
(767 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12711-1|CAA73248.1| 195|Homo sapiens putative progesterone bin... 103 7e-22
DQ496104-1|ABF47093.1| 195|Homo sapiens progesterone receptor m... 103 7e-22
CR456993-1|CAG33274.1| 195|Homo sapiens PGRMC1 protein. 103 7e-22
BC034238-1|AAH34238.1| 195|Homo sapiens progesterone receptor m... 103 7e-22
DQ496105-1|ABF47094.1| 223|Homo sapiens progesterone receptor m... 102 2e-21
BC092478-1|AAH92478.1| 223|Homo sapiens progesterone receptor m... 102 2e-21
BC016692-1|AAH16692.1| 223|Homo sapiens progesterone receptor m... 102 2e-21
AJ002030-1|CAA05152.1| 223|Homo sapiens progresterone binding p... 102 2e-21
BC008823-1|AAH08823.1| 172|Homo sapiens neuron derived neurotro... 62 2e-09
AY762102-1|AAX07829.1| 172|Homo sapiens cell growth-inhibiting ... 62 2e-09
AF173937-1|AAD51419.1| 172|Homo sapiens secreted protein of unk... 62 2e-09
AB126219-1|BAD72063.1| 172|Homo sapiens neudesin protein protein. 62 2e-09
AK223135-1|BAD96855.1| 172|Homo sapiens SCIRP10-related protein... 61 5e-09
AJ249131-1|CAB65109.1| 109|Homo sapiens progesterone membrane b... 60 6e-09
BC051697-1|AAH51697.1| 264|Homo sapiens cytochrome b5 domain co... 48 3e-05
BC020263-1|AAH20263.1| 264|Homo sapiens cytochrome b5 domain co... 48 3e-05
AK172844-1|BAD18808.1| 264|Homo sapiens protein ( Homo sapiens ... 48 3e-05
BC014958-1|AAH14958.1| 295|Homo sapiens BRDG1 protein protein. 33 0.85
AB023483-1|BAA85311.1| 295|Homo sapiens docking protein BRDG1 p... 33 0.85
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 33 1.5
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 33 1.5
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 33 1.5
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 33 1.5
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 33 1.5
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 33 1.5
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 4.5
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 4.5
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 4.5
AF037351-1|AAC09251.1| 388|Homo sapiens macrophage scavenger re... 31 4.5
>Y12711-1|CAA73248.1| 195|Homo sapiens putative progesterone
binding protein protein.
Length = 195
Score = 103 bits (247), Expect = 7e-22
Identities = 50/84 (59%), Positives = 65/84 (77%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 LPKL-RKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATR 441
LP+L R+D T ELR++DG Q+ R+LMA+NG +FDVT+G +FYGP GPY VF GRDA+R
Sbjct: 65 LPRLKRRDFTPAELRRFDGVQDP-RILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASR 123
Query: 442 GLATFSV--TAPEKDYDDLSDLNS 507
GLATF + A + +YDDLSDL +
Sbjct: 124 GLATFCLDKEALKDEYDDLSDLTA 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPND 653
+ E++ +WE QF Y VG+LL+ GEEP YSDEE E D SA ND
Sbjct: 149 QQETLSDWESQFTFKYHHVGKLLKEGEEPTVYSDEE-EPKDESARKND 195
>DQ496104-1|ABF47093.1| 195|Homo sapiens progesterone receptor
membrane component 1 protein.
Length = 195
Score = 103 bits (247), Expect = 7e-22
Identities = 50/84 (59%), Positives = 65/84 (77%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 LPKL-RKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATR 441
LP+L R+D T ELR++DG Q+ R+LMA+NG +FDVT+G +FYGP GPY VF GRDA+R
Sbjct: 65 LPRLKRRDFTPAELRRFDGVQDP-RILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASR 123
Query: 442 GLATFSV--TAPEKDYDDLSDLNS 507
GLATF + A + +YDDLSDL +
Sbjct: 124 GLATFCLDKEALKDEYDDLSDLTA 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPND 653
+ E++ +WE QF Y VG+LL+ GEEP YSDEE E D SA ND
Sbjct: 149 QQETLSDWESQFTFKYHHVGKLLKEGEEPTVYSDEE-EPKDESARKND 195
>CR456993-1|CAG33274.1| 195|Homo sapiens PGRMC1 protein.
Length = 195
Score = 103 bits (247), Expect = 7e-22
Identities = 50/84 (59%), Positives = 65/84 (77%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 LPKL-RKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATR 441
LP+L R+D T ELR++DG Q+ R+LMA+NG +FDVT+G +FYGP GPY VF GRDA+R
Sbjct: 65 LPRLKRRDFTPAELRRFDGVQDP-RILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASR 123
Query: 442 GLATFSV--TAPEKDYDDLSDLNS 507
GLATF + A + +YDDLSDL +
Sbjct: 124 GLATFCLDKEALKDEYDDLSDLTA 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPND 653
+ E++ +WE QF Y VG+LL+ GEEP YSDEE E D SA ND
Sbjct: 149 QQETLSDWESQFTFKYHHVGKLLKEGEEPTVYSDEE-EPKDESARKND 195
>BC034238-1|AAH34238.1| 195|Homo sapiens progesterone receptor
membrane component 1 protein.
Length = 195
Score = 103 bits (247), Expect = 7e-22
Identities = 50/84 (59%), Positives = 65/84 (77%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 LPKL-RKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATR 441
LP+L R+D T ELR++DG Q+ R+LMA+NG +FDVT+G +FYGP GPY VF GRDA+R
Sbjct: 65 LPRLKRRDFTPAELRRFDGVQDP-RILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASR 123
Query: 442 GLATFSV--TAPEKDYDDLSDLNS 507
GLATF + A + +YDDLSDL +
Sbjct: 124 GLATFCLDKEALKDEYDDLSDLTA 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPND 653
+ E++ +WE QF Y VG+LL+ GEEP YSDEE E D SA ND
Sbjct: 149 QQETLSDWESQFTFKYHHVGKLLKEGEEPTVYSDEE-EPKDESARKND 195
>DQ496105-1|ABF47094.1| 223|Homo sapiens progesterone receptor
membrane component 2 protein.
Length = 223
Score = 102 bits (244), Expect = 2e-21
Identities = 48/84 (57%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 LPKLRK-DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATR 441
LP+++K D + +LRQYDG++ R+L+AVNG +FDVT+G++FYGP GPY +F GRDA+R
Sbjct: 95 LPRMKKRDFSLEQLRQYDGSRNP-RILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASR 153
Query: 442 GLATFSV--TAPEKDYDDLSDLNS 507
GLATF + A +YDDLSDLN+
Sbjct: 154 GLATFCLDKDALRDEYDDLSDLNA 177
Score = 65.3 bits (152), Expect = 2e-10
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEE 617
+MESVREWE QF+E YD VGRLL+PGEEP Y+DEE
Sbjct: 179 QMESVREWEMQFKEKYDYVGRLLKPGEEPSEYTDEE 214
>BC092478-1|AAH92478.1| 223|Homo sapiens progesterone receptor
membrane component 2 protein.
Length = 223
Score = 102 bits (244), Expect = 2e-21
Identities = 48/84 (57%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 LPKLRK-DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATR 441
LP+++K D + +LRQYDG++ R+L+AVNG +FDVT+G++FYGP GPY +F GRDA+R
Sbjct: 95 LPRMKKRDFSLEQLRQYDGSRNP-RILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASR 153
Query: 442 GLATFSV--TAPEKDYDDLSDLNS 507
GLATF + A +YDDLSDLN+
Sbjct: 154 GLATFCLDKDALRDEYDDLSDLNA 177
Score = 65.3 bits (152), Expect = 2e-10
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEE 617
+MESVREWE QF+E YD VGRLL+PGEEP Y+DEE
Sbjct: 179 QMESVREWEMQFKEKYDYVGRLLKPGEEPSEYTDEE 214
>BC016692-1|AAH16692.1| 223|Homo sapiens progesterone receptor
membrane component 2 protein.
Length = 223
Score = 102 bits (244), Expect = 2e-21
Identities = 48/84 (57%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 LPKLRK-DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATR 441
LP+++K D + +LRQYDG++ R+L+AVNG +FDVT+G++FYGP GPY +F GRDA+R
Sbjct: 95 LPRMKKRDFSLEQLRQYDGSRNP-RILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASR 153
Query: 442 GLATFSV--TAPEKDYDDLSDLNS 507
GLATF + A +YDDLSDLN+
Sbjct: 154 GLATFCLDKDALRDEYDDLSDLNA 177
Score = 65.3 bits (152), Expect = 2e-10
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEE 617
+MESVREWE QF+E YD VGRLL+PGEEP Y+DEE
Sbjct: 179 QMESVREWEMQFKEKYDYVGRLLKPGEEPSEYTDEE 214
>AJ002030-1|CAA05152.1| 223|Homo sapiens progresterone binding
protein protein.
Length = 223
Score = 102 bits (244), Expect = 2e-21
Identities = 48/84 (57%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 LPKLRK-DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATR 441
LP+++K D + +LRQYDG++ R+L+AVNG +FDVT+G++FYGP GPY +F GRDA+R
Sbjct: 95 LPRMKKRDFSLEQLRQYDGSRNP-RILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASR 153
Query: 442 GLATFSV--TAPEKDYDDLSDLNS 507
GLATF + A +YDDLSDLN+
Sbjct: 154 GLATFCLDKDALRDEYDDLSDLNA 177
Score = 65.3 bits (152), Expect = 2e-10
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEE 617
+MESVREWE QF+E YD VGRLL+PGEEP Y+DEE
Sbjct: 179 QMESVREWEMQFKEKYDYVGRLLKPGEEPSEYTDEE 214
>BC008823-1|AAH08823.1| 172|Homo sapiens neuron derived
neurotrophic factor protein.
Length = 172
Score = 62.5 bits (145), Expect = 2e-09
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 289 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 468
T EL +Y G +E + +AV G +FDVT G FYG G PY G+D+TRG+A S+
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 107
Query: 469 PEKDYD 486
+ +D
Sbjct: 108 ADLTHD 113
>AY762102-1|AAX07829.1| 172|Homo sapiens cell growth-inhibiting
protein 47 protein.
Length = 172
Score = 62.5 bits (145), Expect = 2e-09
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 289 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 468
T EL +Y G +E + +AV G +FDVT G FYG G PY G+D+TRG+A S+
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 107
Query: 469 PEKDYD 486
+ +D
Sbjct: 108 ADLTHD 113
>AF173937-1|AAD51419.1| 172|Homo sapiens secreted protein of
unknown function protein.
Length = 172
Score = 62.5 bits (145), Expect = 2e-09
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 289 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 468
T EL +Y G +E + +AV G +FDVT G FYG G PY G+D+TRG+A S+
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 107
Query: 469 PEKDYD 486
+ +D
Sbjct: 108 ADLTHD 113
>AB126219-1|BAD72063.1| 172|Homo sapiens neudesin protein protein.
Length = 172
Score = 62.5 bits (145), Expect = 2e-09
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 289 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 468
T EL +Y G +E + +AV G +FDVT G FYG G PY G+D+TRG+A S+
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 107
Query: 469 PEKDYD 486
+ +D
Sbjct: 108 ADLTHD 113
>AK223135-1|BAD96855.1| 172|Homo sapiens SCIRP10-related protein
variant protein.
Length = 172
Score = 60.9 bits (141), Expect = 5e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +1
Query: 289 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 468
T EL +Y G +E + +AV G +F+VT G FYG G PY G+D+TRG+A S+
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFEVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 107
Query: 469 PEKDYD 486
+ +D
Sbjct: 108 ADLTHD 113
>AJ249131-1|CAB65109.1| 109|Homo sapiens progesterone membrane
binding protein protein.
Length = 109
Score = 60.5 bits (140), Expect = 6e-09
Identities = 27/46 (58%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = +1
Query: 265 LPKL-RKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGP 399
LP+L R+D T ELR++DG Q+ R+LMA+NG +FDVT+G +FYGP
Sbjct: 65 LPRLKRRDFTPAELRRFDGVQDP-RILMAINGKVFDVTKGRKFYGP 109
>BC051697-1|AAH51697.1| 264|Homo sapiens cytochrome b5 domain
containing 2 protein.
Length = 264
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +1
Query: 298 ELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEK 477
EL +Y G + +A+ G ++DV+ G R Y PG Y+ F GRDA+R T +
Sbjct: 42 ELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGL 101
Query: 478 DYDDLSDLNS 507
DD+SDL++
Sbjct: 102 -VDDVSDLSA 110
>BC020263-1|AAH20263.1| 264|Homo sapiens cytochrome b5 domain
containing 2 protein.
Length = 264
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +1
Query: 298 ELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEK 477
EL +Y G + +A+ G ++DV+ G R Y PG Y+ F GRDA+R T +
Sbjct: 42 ELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGL 101
Query: 478 DYDDLSDLNS 507
DD+SDL++
Sbjct: 102 -VDDVSDLSA 110
>AK172844-1|BAD18808.1| 264|Homo sapiens protein ( Homo sapiens
cDNA FLJ24005 fis, clone KAT01883. ).
Length = 264
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +1
Query: 298 ELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEK 477
EL +Y G + +A+ G ++DV+ G R Y PG Y+ F GRDA+R T +
Sbjct: 42 ELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGL 101
Query: 478 DYDDLSDLNS 507
DD+SDL++
Sbjct: 102 -VDDVSDLSA 110
>BC014958-1|AAH14958.1| 295|Homo sapiens BRDG1 protein protein.
Length = 295
Score = 33.5 bits (73), Expect = 0.85
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +3
Query: 519 SVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPNDDKKT---NLNFHCQM 689
S +E E ++N L +LRPG + RNYS +E D + + + N +
Sbjct: 183 SRKEATEMLQKNPSLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMSVGQNYTIELEK 242
Query: 690 TVALP---SKIDQFVEHFASHLHSLI 758
V LP S ID FV+ +L I
Sbjct: 243 PVTLPNLFSVIDYFVKETRGNLRPFI 268
>AB023483-1|BAA85311.1| 295|Homo sapiens docking protein BRDG1
protein.
Length = 295
Score = 33.5 bits (73), Expect = 0.85
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +3
Query: 519 SVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPNDDKKT---NLNFHCQM 689
S +E E ++N L +LRPG + RNYS +E D + + + N +
Sbjct: 183 SRKEATEMLQKNPSLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMSVGQNYTIELEK 242
Query: 690 TVALP---SKIDQFVEHFASHLHSLI 758
V LP S ID FV+ +L I
Sbjct: 243 PVTLPNLFSVIDYFVKETRGNLRPFI 268
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 250 CSLKKLPKLRKDMTAVELRQYDGTQEGG-RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGG 426
C + K + R+ + G E + L+ G+ DVT G R YG P +V+ G
Sbjct: 76 CGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSG 135
Query: 427 RDATRGLATFSVTAPEKDYDD 489
G F P Y+D
Sbjct: 136 VQPGIGTEVFVGKIPRDLYED 156
>BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein.
Length = 607
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 250 CSLKKLPKLRKDMTAVELRQYDGTQEGG-RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGG 426
C + K + R+ + G E + L+ G+ DVT G R YG P +V+ G
Sbjct: 73 CGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSG 132
Query: 427 RDATRGLATFSVTAPEKDYDD 489
G F P Y+D
Sbjct: 133 VQPGIGTEVFVGKIPRDLYED 153
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 250 CSLKKLPKLRKDMTAVELRQYDGTQEGG-RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGG 426
C + K + R+ + G E + L+ G+ DVT G R YG P +V+ G
Sbjct: 99 CGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSG 158
Query: 427 RDATRGLATFSVTAPEKDYDD 489
G F P Y+D
Sbjct: 159 VQPGIGTEVFVGKIPRDLYED 179
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 250 CSLKKLPKLRKDMTAVELRQYDGTQEGG-RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGG 426
C + K + R+ + G E + L+ G+ DVT G R YG P +V+ G
Sbjct: 99 CGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSG 158
Query: 427 RDATRGLATFSVTAPEKDYDD 489
G F P Y+D
Sbjct: 159 VQPGIGTEVFVGKIPRDLYED 179
>AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 250 CSLKKLPKLRKDMTAVELRQYDGTQEGG-RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGG 426
C + K + R+ + G E + L+ G+ DVT G R YG P +V+ G
Sbjct: 99 CGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSG 158
Query: 427 RDATRGLATFSVTAPEKDYDD 489
G F P Y+D
Sbjct: 159 VQPGIGTEVFVGKIPRDLYED 179
>AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 250 CSLKKLPKLRKDMTAVELRQYDGTQEGG-RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGG 426
C + K + R+ + G E + L+ G+ DVT G R YG P +V+ G
Sbjct: 99 CGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSG 158
Query: 427 RDATRGLATFSVTAPEKDYDD 489
G F P Y+D
Sbjct: 159 VQPGIGTEVFVGKIPRDLYED 179
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 464 VTENVASPLVASLPPKTAYGPPGP*NR-FPLVTSNIHPFTAINTLPPSCVPS 312
+T P PP T P P P T+ I P T+ TLPP+ PS
Sbjct: 966 ITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 1017
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 464 VTENVASPLVASLPPKTAYGPPGP*NR-FPLVTSNIHPFTAINTLPPSCVPS 312
+T P PP T P P P T+ I P T+ TLPP+ PS
Sbjct: 249 ITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 300
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 464 VTENVASPLVASLPPKTAYGPPGP*NR-FPLVTSNIHPFTAINTLPPSCVPS 312
+T P PP T P P P T+ I P T+ TLPP+ PS
Sbjct: 1591 ITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 1642
>AF037351-1|AAC09251.1| 388|Homo sapiens macrophage scavenger
receptor type III protein.
Length = 388
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 747 EDGKQNVLQIGQFYLVKLPSFGNESSNLFSC--RRWGERTC 631
E G N L G +L ++ FG ESS + C R+WG R C
Sbjct: 337 EKGSGNTLSTGPIWLNEVFCFGRESS-IEECKIRQWGTRAC 376
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,941,215
Number of Sequences: 237096
Number of extensions: 2648952
Number of successful extensions: 6657
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 6125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6629
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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