Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0811
(767 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g52240.1 68418.m06484 cytochrome b5 domain-containing protein... 77 1e-14
At3g48890.1 68416.m05341 cytochrome b5 domain-containing protein... 73 2e-13
At2g24940.1 68415.m02982 cytochrome b5 domain-containing protein... 66 2e-11
At4g14965.1 68417.m02300 cytochrome b5 domain-containing protein... 55 6e-08
At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family... 33 0.21
At3g56140.1 68416.m06240 expressed protein At2g40400 - Arabidops... 31 0.85
At5g36060.1 68418.m04344 hypothetical protein 30 2.0
At4g11750.1 68417.m01874 kelch repeat-containing F-box family pr... 30 2.0
At1g59790.1 68414.m06732 cullin-related low similarity to Hs-CUL... 29 3.4
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 4.5
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 29 4.5
At2g21235.1 68415.m02522 bZIP protein-related similar to VirE2-i... 29 4.5
At1g22230.1 68414.m02779 expressed protein ; expression supporte... 29 4.5
At5g56890.1 68418.m07099 protein kinase family protein contains ... 28 7.9
At3g53570.3 68416.m05915 protein kinase (AFC1) (AME2) identical ... 28 7.9
At3g53570.2 68416.m05916 protein kinase (AFC1) (AME2) identical ... 28 7.9
At3g53570.1 68416.m05917 protein kinase (AFC1) (AME2) identical ... 28 7.9
>At5g52240.1 68418.m06484 cytochrome b5 domain-containing protein
similar to SP|P70580 Membrane associated progesterone
receptor component 1 {Rattus norvegicus}; contains Pfam
profile PF00173: Heme/Steroid binding domain
Length = 220
Score = 77.4 bits (182), Expect = 1e-14
Identities = 45/124 (36%), Positives = 63/124 (50%)
Frame = +1
Query: 283 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 462
++T EL+QYDG+ +LMA+ I+DVT+ FYGPGGPYA+F G+DA+R LA S
Sbjct: 74 EITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 133
Query: 463 TAPEKDYDDLSDLNSRKWNQ*GNGRNNLERIMIWSVDF*GLVKNPGTTRTKNPKKQTRPL 642
EKD W+ G G L+ + W F GT + + +T +
Sbjct: 134 --EEKDL---------TWDVSGLGPFELDALQDWEYKFMSKYAKVGTVKVAGSEPETASV 182
Query: 643 SPTT 654
S T
Sbjct: 183 SEPT 186
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEE 626
E++++++WE +F Y VG + G EP S EP E
Sbjct: 149 ELDALQDWEYKFMSKYAKVGTVKVAGSEPETASVSEPTE 187
>At3g48890.1 68416.m05341 cytochrome b5 domain-containing protein
similar to SP|O00264 Membrane associated progesterone
receptor component (mPR) {Homo sapiens}; contains Pfam
profile PF00173: Heme/Steroid binding domain
Length = 233
Score = 73.3 bits (172), Expect = 2e-13
Identities = 42/112 (37%), Positives = 60/112 (53%)
Frame = +1
Query: 283 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 462
++T EL+ YDG+ +LMA+ G I+DV++ FYGPGGPYA+F G+DA+R LA S
Sbjct: 70 EITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 129
Query: 463 TAPEKDYDDLSDLNSRKWNQ*GNGRNNLERIMIWSVDF*GLVKNPGTTRTKN 618
+D D D++ G G LE + W F GT + K+
Sbjct: 130 ----EDQDLTGDIS-------GLGAFELEALQDWEYKFMSKYVKVGTIQKKD 170
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 510 EMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSA 641
E+E++++WE +F Y VG + + E + S EP EA T++
Sbjct: 145 ELEALQDWEYKFMSKYVKVGTIQKKDGEGKESS--EPSEAKTAS 186
>At2g24940.1 68415.m02982 cytochrome b5 domain-containing protein
similar to SP|P70580 Membrane associated progesterone
receptor component 1 {Rattus norvegicus}; contains Pfam
profile PF00173: Heme/Steroid binding domain
Length = 100
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +1
Query: 283 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFS 459
+ TA +L QY+GT E + +A+ G +FDVT G FYG GG Y++F G+DA+R L S
Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMS 60
>At4g14965.1 68417.m02300 cytochrome b5 domain-containing protein
similar to SP|O15173 Membrane associated progesterone
receptor component 2 (Steroid receptor protein DG6)
{Homo sapiens}; contains Pfam profile PF00173:
Heme/Steroid binding domain
Length = 245
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/73 (41%), Positives = 42/73 (57%)
Frame = +1
Query: 289 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 468
+A EL Y+GT E +L+ + G +FDVT+G YG GG Y F GRDA+R + + T
Sbjct: 43 SAEELALYNGTDETLPILLGILGSVFDVTKGKFHYGSGGGYNHFAGRDASRAFVSGNFTG 102
Query: 469 PEKDYDDLSDLNS 507
+ D L L+S
Sbjct: 103 -DGLTDSLQGLSS 114
>At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 473
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -1
Query: 449 ASPLVASLPPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVPSYCRSST 294
+ PL+ +L P +++ P N P + S HP PP +P++ SS+
Sbjct: 249 SQPLIKNLTPPSSFSSPRKSNPIPNLASEFHPSPPPPPPPPPPLPAFYNSSS 300
>At3g56140.1 68416.m06240 expressed protein At2g40400 - Arabidopsis
thaliana, EMBL:AC007020
Length = 745
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -1
Query: 497 SLKSS*SFSGAVTENVASPLVASLPPKTAYGPPGP*NRFPLVTSNIHPFTAI 342
SL S S S VT S P T PP P N+ +TS I+ TAI
Sbjct: 88 SLASEESSSATVTSPAESAAPPPPPATTTPSPPPPVNKEETITSRIYDATAI 139
>At5g36060.1 68418.m04344 hypothetical protein
Length = 165
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 273 IAKRYDRSRTTAVRRDTGGWQSVDGCEWVDIRCD*RESVLRSRWAICCFWRKRCHKRT 446
+A+ Y S + GGW +DG W R RES+ R C + R HKR+
Sbjct: 110 VAECYRSSLWMEPYGEDGGWVQIDGAYWAQPRV--RESIPR-----CSRCKSRAHKRS 160
>At4g11750.1 68417.m01874 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 386
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +1
Query: 256 LKKLPKLRKDMTAVELRQYDG 318
LKKLPKL KD T V L Y G
Sbjct: 304 LKKLPKLPKDCTCVRLLGYSG 324
>At1g59790.1 68414.m06732 cullin-related low similarity to Hs-CUL-1
[Homo sapiens] GI:1381142
Length = 374
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 615 EPEEADTSALPNDDKKTNLNFHCQMTVALPSKIDQFVEHFASHL 746
E E + SAL DDKK +L+ ++ + +P ++ + + F H+
Sbjct: 271 ENEHSGFSALLRDDKKNDLSRIYRLYLPIPKRLGRVADLFKKHI 314
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 461 TENVASPLVASLPPKTAYGPPGP*NRFP-LVTSNIHPFTAINTLPPSCVP 315
T + SP A+ PP A PP P + P L T+ I P T + P +P
Sbjct: 35 TPTLPSPSPATKPPSPALKPPTPSYKPPTLPTTPIKPPTTKPPVKPPTIP 84
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +3
Query: 513 MESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPNDDKKTNLNFHCQMT 692
ME EEQF+ L LL+ E RN + D+ D+ +T L +CQ
Sbjct: 42 MEEHDSSEEQFQNLKSLNAMLLKQAMEKRN-------QIDSLVQAKDELETELARYCQEK 94
Query: 693 VALPSKIDQ 719
L ++DQ
Sbjct: 95 TGLRDELDQ 103
>At2g21235.1 68415.m02522 bZIP protein-related similar to
VirE2-interacting protein VIP1 [Arabidopsis thaliana]
GI:7258340, tbZIP transcription factor [Arabidopsis
thaliana] GI:17065884
Length = 550
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 2/112 (1%)
Frame = -1
Query: 431 SLPPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVPSYCRSSTAVISFRNLGSFFKE 252
SL +T+ PP R+P + + P T P + ++S ++ SF N SF
Sbjct: 27 SLSSRTSLSPPLI--RYPAGSPDFSPGPRCTTQPSPTFSDFTQASPSLTSFNNPASFTPS 84
Query: 251 QPLNNVSYTCSKIYTVSQMYSQKQNK*TVDKTVFL--RSQKSHCVWLAHFQP 102
+N+ I T S ++ K + + + F ++ S C + F P
Sbjct: 85 FSFSNIH---QMIPTPSSSHNSKASVSSASSSSFYFPQTSPSSCSTPSSFSP 133
>At1g22230.1 68414.m02779 expressed protein ; expression supported
by MPSS
Length = 314
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 522 VREW-EEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPNDDKKTNL 671
V+ W EE+ E + R+ + GEE D + D +L ++KK NL
Sbjct: 226 VKNWSEEKKEETEEGDNRVKQSGEEEEEEKDRVGNKKDLRSLMEEEKKMNL 276
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -1
Query: 476 FSGAVTENVASPLVASLP--PKTAYGPPGP*NRFPLVTSNIH 357
FSG VT S V+ +P P A PP P N P SN H
Sbjct: 145 FSGRVTPAPVSSPVSDIPPIPSVALPPPTPSNVPPRNASNNH 186
>At3g53570.3 68416.m05915 protein kinase (AFC1) (AME2) identical to
protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
Length = 453
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -1
Query: 464 VTENVASPLVASLPPKTAYGPP---GP*NRFPLVTSNIHPFTAINTLPPSCVPSY 309
+T + A PL+ PP T + PP GP LV + ++P N LP P +
Sbjct: 26 LTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNFVYPNMFYNGLPRQGSPPW 80
>At3g53570.2 68416.m05916 protein kinase (AFC1) (AME2) identical to
protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
Length = 467
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -1
Query: 464 VTENVASPLVASLPPKTAYGPP---GP*NRFPLVTSNIHPFTAINTLPPSCVPSY 309
+T + A PL+ PP T + PP GP LV + ++P N LP P +
Sbjct: 40 LTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNFVYPNMFYNGLPRQGSPPW 94
>At3g53570.1 68416.m05917 protein kinase (AFC1) (AME2) identical to
protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
Length = 467
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -1
Query: 464 VTENVASPLVASLPPKTAYGPP---GP*NRFPLVTSNIHPFTAINTLPPSCVPSY 309
+T + A PL+ PP T + PP GP LV + ++P N LP P +
Sbjct: 40 LTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNFVYPNMFYNGLPRQGSPPW 94
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,148,461
Number of Sequences: 28952
Number of extensions: 379544
Number of successful extensions: 1254
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -