Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0808
         (756 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7JV09 Cluster: GH28348p; n=3; Drosophila melanogaster|...    54   5e-06
UniRef50_Q6AWN6 Cluster: RE53512p; n=4; Diptera|Rep: RE53512p - ...    54   5e-06
UniRef50_UPI0000D5635E Cluster: PREDICTED: similar to CG4405-PA,...    49   1e-04
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    36   0.82 
UniRef50_Q9KQN0 Cluster: Transcriptional regulator, HTH_3 family...    35   1.9  
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   1.9  
UniRef50_Q4GYH5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_UPI000051AB93 Cluster: PREDICTED: similar to Cobl-like ...    33   7.6  
UniRef50_A4C138 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  

>UniRef50_Q7JV09 Cluster: GH28348p; n=3; Drosophila melanogaster|Rep:
            GH28348p - Drosophila melanogaster (Fruit fly)
          Length = 1054

 Score = 53.6 bits (123), Expect = 5e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +2

Query: 401  TLQRKKSLPDVASMPRAAETGMSREEVSALGSARRRS 511
            TLQRKKS+PD   +PRA E  MSREEVSALGSARR +
Sbjct: 966  TLQRKKSMPDFQELPRATE-AMSREEVSALGSARREA 1001



 Score = 39.1 bits (87), Expect = 0.12
 Identities = 19/44 (43%), Positives = 25/44 (56%)
 Frame = +3

Query: 525  EESEKLRANPLLYLVSPQVXXXXXXXXXXXXSILFGILLVYYFV 656
            E +E+L+ANPLLYLVSPQV             ++F + L   FV
Sbjct: 1007 EVNERLKANPLLYLVSPQVKDWFVRQQLMLLVLIFNVALALLFV 1050


>UniRef50_Q6AWN6 Cluster: RE53512p; n=4; Diptera|Rep: RE53512p -
           Drosophila melanogaster (Fruit fly)
          Length = 129

 Score = 53.6 bits (123), Expect = 5e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +2

Query: 401 TLQRKKSLPDVASMPRAAETGMSREEVSALGSARRRS 511
           TLQRKKS+PD   +PRA E  MSREEVSALGSARR +
Sbjct: 41  TLQRKKSMPDFQELPRATE-AMSREEVSALGSARREA 76



 Score = 39.1 bits (87), Expect = 0.12
 Identities = 19/44 (43%), Positives = 25/44 (56%)
 Frame = +3

Query: 525 EESEKLRANPLLYLVSPQVXXXXXXXXXXXXSILFGILLVYYFV 656
           E +E+L+ANPLLYLVSPQV             ++F + L   FV
Sbjct: 82  EVNERLKANPLLYLVSPQVKDWFVRQQLMLLVLIFNVALALLFV 125


>UniRef50_UPI0000D5635E Cluster: PREDICTED: similar to CG4405-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG4405-PA, isoform A - Tribolium castaneum
          Length = 871

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 27/40 (67%), Positives = 29/40 (72%)
 Frame = +2

Query: 386 LSTPQTLQRKKSLPDVASMPRAAETGMSREEVSALGSARR 505
           L T  +LQRKKSLPD   +PRA    MSREEVS LGSARR
Sbjct: 778 LVTQTSLQRKKSLPDFQDLPRAT-GAMSREEVSYLGSARR 816



 Score = 38.7 bits (86), Expect = 0.15
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 525 EESEKLRANPLLYLVSPQV 581
           EE E+LRANPLLYLVSPQV
Sbjct: 824 EEKERLRANPLLYLVSPQV 842


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 36.3 bits (80), Expect = 0.82
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = -1

Query: 405 SVCGVLSICQYIYFFYSFLLLRWVDELTAHLYL 307
           +VC  ++     +    FLLLRWVDELTAHL L
Sbjct: 137 TVCSQINANPKRFCLSRFLLLRWVDELTAHLVL 169


>UniRef50_Q9KQN0 Cluster: Transcriptional regulator, HTH_3 family;
           n=12; Gammaproteobacteria|Rep: Transcriptional
           regulator, HTH_3 family - Vibrio cholerae
          Length = 181

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
 Frame = +2

Query: 395 PQTLQRKKSLPDVASM------PRAAETGMSREEVSALGSARRRSAPHARGI 532
           PQ L  ++S PD  +M      P AA+TG+   E++ L   ++ S+PHA G+
Sbjct: 73  PQLLSSERSFPDDLNMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPHALGV 124


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -3

Query: 709 WYLPVRTHKRSYHQ 668
           WYLP RTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_Q4GYH5 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 178

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -2

Query: 377 NIYIFFILFYCFDGWTSSQPTCILFSSVLDELASKYMLLIPPQLIFN 237
           ++ +FFIL +CF  + S     ++  SV   L S+ +LL+PP L F+
Sbjct: 23  HVCVFFILLFCFASFYSRMHFSLVLLSVSSVLVSE-LLLLPPSLPFS 68


>UniRef50_UPI000051AB93 Cluster: PREDICTED: similar to Cobl-like 1;
           n=1; Apis mellifera|Rep: PREDICTED: similar to Cobl-like
           1 - Apis mellifera
          Length = 1342

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +2

Query: 398 QTLQRKKSLPDVASMPRAAETGMSREEVSALGSARRRSAP 517
           QT Q  KSL ++AS+P     G+S   +S+ G  ++R AP
Sbjct: 391 QTSQSSKSLNNLASVPGTLSHGISNTSLSSTGLRKKRVAP 430


>UniRef50_A4C138 Cluster: Putative uncharacterized protein; n=1;
           Polaribacter irgensii 23-P|Rep: Putative uncharacterized
           protein - Polaribacter irgensii 23-P
          Length = 887

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 15/46 (32%), Positives = 29/46 (63%)
 Frame = +2

Query: 137 INNYIKSAGSMLEHITHTYINHEEEITYTNKLRN*KSIVVGSGAYI 274
           I+N I +  S +E++ H     +++I+YTNK ++ K + + +G YI
Sbjct: 414 ISNLIFNGNSTIENLQHQNTLFDQKISYTNKFKD-KKVFILTGRYI 458


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,934,346
Number of Sequences: 1657284
Number of extensions: 14377354
Number of successful extensions: 38160
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38133
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)