Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0808
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023844-2|CAA19527.1|  163|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z81561-3|CAB04553.2|  350|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AL032652-11|CAA21712.2|  350|Caenorhabditis elegans Hypothetical...    28   6.2  

>AL023844-2|CAA19527.1|  163|Caenorhabditis elegans Hypothetical
           protein Y48A6B.3 protein.
          Length = 163

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +1

Query: 277 EANSSSTEENKIQVGCELVHPSKQ----*KRIKKIYILTDAEHAADASTQE 417
           +A + +TE+++ Q  CELV+P  Q     K  KK+Y L     A D + +E
Sbjct: 21  DATAPTTEKDEYQALCELVNPIAQPLANRKLAKKVYKLIKKASAGDKTLRE 71


>Z81561-3|CAB04553.2|  350|Caenorhabditis elegans Hypothetical
           protein Y63D3A.8 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 335 WTSSQPTCILFSSVLDELASKYMLLIPPQLIFNSVTYLC 219
           W  S     LF SV+  L + Y LL   QL+ + V Y C
Sbjct: 105 WRISNECVSLFHSVISGLWAAYALLYYKQLVQDLVNYRC 143


>AL032652-11|CAA21712.2|  350|Caenorhabditis elegans Hypothetical
           protein Y63D3A.8 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 335 WTSSQPTCILFSSVLDELASKYMLLIPPQLIFNSVTYLC 219
           W  S     LF SV+  L + Y LL   QL+ + V Y C
Sbjct: 105 WRISNECVSLFHSVISGLWAAYALLYYKQLVQDLVNYRC 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,671,551
Number of Sequences: 27780
Number of extensions: 346710
Number of successful extensions: 869
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)