Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0807
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.    25   2.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.1  

>AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.
          Length = 76

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 479 RHHFXPFIHQHHGVYPSTTSGVQNSLAAVVLQETDQEV 366
           RH   PF  Q++  Y S  S    S AA V+Q ++  V
Sbjct: 20  RHQCSPFFFQYNRPYLSQPSSQLASTAANVVQRSNVTV 57


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 153  INNSDLSIFKFIKS-FIETGATRKIIRTTNGYF 58
            +++ D  I +++ + FI   +  K I +TNGYF
Sbjct: 2231 LHSEDSCIMRYVTATFINAASNFKNIFSTNGYF 2263


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 177 DNTHYRHFINNSDLSIF 127
           DNTHYR    ++ L++F
Sbjct: 266 DNTHYRAVAQSTSLAVF 282


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 177 DNTHYRHFINNSDLSIF 127
           DNTHYR    +  L++F
Sbjct: 266 DNTHYRAVAQSMSLAVF 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,614
Number of Sequences: 2352
Number of extensions: 11047
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)