Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0807
(574 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 1.6
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 2.8
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 22 5.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 5.0
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 5.0
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 5.0
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 5.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 6.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 6.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 6.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 6.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 6.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 6.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 6.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 6.6
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 6.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 6.6
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 21 8.7
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 8.7
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 278 CKRSVR*RQSGKNMEQVHRR**SKNAELQRLLDRSLEEQRLQ 403
CKR S +N + ++ R SKN + ++ +++ E +R Q
Sbjct: 38 CKRVYSSLNSLRNHKSIYHRQHSKNEQQRKEMEQMREREREQ 79
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -1
Query: 124 IHKKFYRDRSNTENYTNNEW 65
IH Y+ N NY NN +
Sbjct: 89 IHNNNYKYNYNNNNYNNNNY 108
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -1
Query: 124 IHKKFYRDRSNTENYTNNEW 65
IH Y+ N NY NN +
Sbjct: 89 IHNNNYKYNYNNNNYNNNNY 108
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 487 ASTDTTLXPSFTSIMESIPVPQA 419
A+ TT+ P F + S+P+P A
Sbjct: 461 ATVGTTVAPCFEEPLPSLPLPGA 483
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 21.8 bits (44), Expect = 5.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +2
Query: 26 LPIFLCHKY 52
+P F+CHKY
Sbjct: 49 VPTFMCHKY 57
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -2
Query: 135 SIFKFIKSFIETGATRKIIRTTNG 64
++F+FI+ + +G+T K+ NG
Sbjct: 330 NLFEFIRKQVLSGSTGKVAFDDNG 353
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 224 LWQRTRYSTRVLGYSLRGCK 283
+W+ T ST LG+ + G K
Sbjct: 401 VWRETISSTATLGFRVEGIK 420
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 224 LWQRTRYSTRVLGYSLRGCK 283
+W+ T ST LG+ + G K
Sbjct: 316 VWRETISSTATLGFRVEGIK 335
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 224 LWQRTRYSTRVLGYSLRGCK 283
+W+ T ST LG+ + G K
Sbjct: 635 VWRETISSTATLGFRVEGIK 654
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 109 YRDRSNTENYTNNEWLFYII 50
Y + +N NY N + L+Y I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 109 YRDRSNTENYTNNEWLFYII 50
Y + +N NY N + L+Y I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 109 YRDRSNTENYTNNEWLFYII 50
Y + +N NY N + L+Y I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 109 YRDRSNTENYTNNEWLFYII 50
Y + +N NY N + L+Y I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 109 YRDRSNTENYTNNEWLFYII 50
Y + +N NY N + L+Y I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 109 YRDRSNTENYTNNEWLFYII 50
Y + +N NY N + L+Y I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 109 YRDRSNTENYTNNEWLFYII 50
Y + +N NY N + L+Y I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 109 YRDRSNTENYTNNEWLFYII 50
Y + +N NY N + L+Y I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = -3
Query: 371 EVFVVLRSLITISDELVPCFCRFAVSVLIFY 279
E+ + R + + + ++PC +V++L+FY
Sbjct: 206 EIRLRRRPMFYVFNLILPCILINSVALLVFY 236
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 436 IPVPQAASRTVLQPL 392
+PVPQ T+L P+
Sbjct: 796 VPVPQVNDSTILSPV 810
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 439 SIPVPQAASRTVLQPLFFKRPIKKSL 362
+IPVPQAA++ ++ ++P + L
Sbjct: 55 TIPVPQAANKGMINQYGGEQPTLRLL 80
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.7
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 49 ILCKIAIRCSYNFPCCSGLYKTFYEFKY*KVRVIDEVPIMSIVDC 183
I+ ++ +YN LY Y+ Y + I+++PI + C
Sbjct: 81 IISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQIPIPVPIYC 125
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.7
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 49 ILCKIAIRCSYNFPCCSGLYKTFYEFKY*KVRVIDEVPIMSIVDC 183
I+ ++ +YN LY Y+ Y + I+++PI + C
Sbjct: 81 IISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQIPIPVPIYC 125
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,148
Number of Sequences: 438
Number of extensions: 3385
Number of successful extensions: 25
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -