Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0807
(574 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12270.1 68416.m01532 protein arginine N-methyltransferase fa... 40 9e-04
At3g20020.1 68416.m02533 protein arginine N-methyltransferase fa... 36 0.025
At1g78140.1 68414.m09106 methyltransferase-related similar to Pr... 34 0.077
At3g61050.1 68416.m06832 calcium-dependent lipid-binding protein... 33 0.14
At4g25080.3 68417.m03600 magnesium-protoporphyrin O-methyltransf... 33 0.18
At4g25080.2 68417.m03599 magnesium-protoporphyrin O-methyltransf... 33 0.18
At4g25080.1 68417.m03598 magnesium-protoporphyrin O-methyltransf... 33 0.18
At3g56330.1 68416.m06262 N2,N2-dimethylguanosine tRNA methyltran... 31 0.72
At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related conta... 30 1.3
At2g30920.1 68415.m03769 hexaprenyldihydroxybenzoate methyltrans... 28 5.1
At5g37460.1 68418.m04508 hypothetical protein contains Pfam PF04... 27 6.7
At5g37470.1 68418.m04509 hypothetical protein contains Pfam PF04... 27 8.9
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 27 8.9
At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF051... 27 8.9
>At3g12270.1 68416.m01532 protein arginine N-methyltransferase
family protein similar to protein arginine
N-methyltransferase 3 from {Rattus norvegicus}
SP|O70467, {Homo sapiens} SP|O60678
Length = 590
Score = 40.3 bits (90), Expect = 9e-04
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Frame = +3
Query: 348 RTQNYKDFLIGLLKN----NGCKTVLDAACGTGIDSMMLVNEG-XKVVSVDASDKMXK 506
RT+ Y+D LLKN NG V+D CGTGI S+ G +VV+V+AS+KM K
Sbjct: 260 RTEAYRD---ALLKNPTLLNG-SVVMDVGCGTGILSLFAAKAGASRVVAVEASEKMAK 313
>At3g20020.1 68416.m02533 protein arginine N-methyltransferase
family protein similar to SP|Q96LA8 Protein arginine
N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
Length = 435
Score = 35.5 bits (78), Expect = 0.025
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 348 RTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNEGXK-VVSVDASD 494
RT+ Y++ ++ K V+D CGTGI S+ G K V +VDASD
Sbjct: 102 RTETYREAIMQHQSLIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASD 151
>At1g78140.1 68414.m09106 methyltransferase-related similar to
Probable delta(24)-sterol C-methyltransferase
(Swiss-Prot:O14321) [Schizosaccharomyces pombe]; similar
to C5-O-methyltransferase (GI:5921167) [Streptomyces
avermitilis]; similar to S-adenosyl-methionine-sterol-C-
methyltransferase (GI:3560474) [Nicotiana tabacum]
Length = 355
Score = 33.9 bits (74), Expect = 0.077
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +3
Query: 318 WNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNEG--XKVVSVDAS 491
W F G + + K +L +L N ++DA+CG+G+ S + V+++D S
Sbjct: 161 WGGFPGPEKE-FEMAKAYLKPVLGGN----IIDASCGSGMFSRLFTRSDLFSLVIALDYS 215
Query: 492 DKMXKQLSKLAGRRERTPN 548
+ M +Q +L + E PN
Sbjct: 216 ENMLRQCYELLNKEENFPN 234
>At3g61050.1 68416.m06832 calcium-dependent lipid-binding protein,
putative strong similarity to CLB1 [Lycopersicon
esculentum] GI:2789434; contains Pfam profile PF00168:
C2 domain
Length = 510
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -3
Query: 434 PSTTSGVQNSLAAVVLQETDQEVFVVLRSLITISDELVPCFCRFAVSVL 288
P+ GV +A++ +Q D +VF V R + ++DE +PC V++L
Sbjct: 150 PNIVLGVTALVASIPIQLKDLQVFTVARVIFQLADE-IPCISAVVVALL 197
>At4g25080.3 68417.m03600 magnesium-protoporphyrin
O-methyltransferase, putative / magnesium-protoporphyrin
IX methyltransferase, putative similar to SP|Q55467
Magnesium-protoporphyrin O-methyltransferase (EC
2.1.1.1) (Magnesium-protoporphyrin IX methyltransferase)
{Synechocystis sp.}
Length = 312
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 13/101 (12%)
Frame = +3
Query: 288 QYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLK-------------NNGCKTVLDAACG 428
+Y + + W K G++++ + KD +G K + TV DA CG
Sbjct: 95 EYFNSTGFERWRKIYGETDEVNRVQKDIRLGHAKTVENTMLMLTEDRSLAGVTVCDAGCG 154
Query: 429 TGIDSMMLVNEGXKVVSVDASDKMXKQLSKLAGRRERTPNM 551
TG+ S+ L EG V + D S M + A + + N+
Sbjct: 155 TGLLSIPLAKEGAIVSASDISAAMVAEAEMKAKAQLPSENL 195
>At4g25080.2 68417.m03599 magnesium-protoporphyrin
O-methyltransferase, putative / magnesium-protoporphyrin
IX methyltransferase, putative similar to SP|Q55467
Magnesium-protoporphyrin O-methyltransferase (EC
2.1.1.1) (Magnesium-protoporphyrin IX methyltransferase)
{Synechocystis sp.}
Length = 312
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 13/101 (12%)
Frame = +3
Query: 288 QYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLK-------------NNGCKTVLDAACG 428
+Y + + W K G++++ + KD +G K + TV DA CG
Sbjct: 95 EYFNSTGFERWRKIYGETDEVNRVQKDIRLGHAKTVENTMLMLTEDRSLAGVTVCDAGCG 154
Query: 429 TGIDSMMLVNEGXKVVSVDASDKMXKQLSKLAGRRERTPNM 551
TG+ S+ L EG V + D S M + A + + N+
Sbjct: 155 TGLLSIPLAKEGAIVSASDISAAMVAEAEMKAKAQLPSENL 195
>At4g25080.1 68417.m03598 magnesium-protoporphyrin
O-methyltransferase, putative / magnesium-protoporphyrin
IX methyltransferase, putative similar to SP|Q55467
Magnesium-protoporphyrin O-methyltransferase (EC
2.1.1.1) (Magnesium-protoporphyrin IX methyltransferase)
{Synechocystis sp.}
Length = 312
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 13/101 (12%)
Frame = +3
Query: 288 QYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLK-------------NNGCKTVLDAACG 428
+Y + + W K G++++ + KD +G K + TV DA CG
Sbjct: 95 EYFNSTGFERWRKIYGETDEVNRVQKDIRLGHAKTVENTMLMLTEDRSLAGVTVCDAGCG 154
Query: 429 TGIDSMMLVNEGXKVVSVDASDKMXKQLSKLAGRRERTPNM 551
TG+ S+ L EG V + D S M + A + + N+
Sbjct: 155 TGLLSIPLAKEGAIVSASDISAAMVAEAEMKAKAQLPSENL 195
>At3g56330.1 68416.m06262 N2,N2-dimethylguanosine tRNA
methyltransferase family protein low similarity to
SP|Q9P804 N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase)
{Schizosaccharomyces pombe}; contains Pfam profile
PF02005: N2,N2-dimethylguanosine tRNA methyltransferase
Length = 433
Score = 30.7 bits (66), Expect = 0.72
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 387 KNNGCKTVLDAACGTGIDSM--MLVNEGXKVVSVDASDKMXKQLSKLAGRRER 539
++NG VLDA CG GI S+ ++ E V++ DA+D + ++ + ER
Sbjct: 85 RSNGSLRVLDAMCGCGIRSLRYLVEAEADFVMANDANDDNRRVITDNLSKVER 137
>At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related contains
similarity to zinc finger protein rts2 GB:U16133
GI:563244 from [Saccharomyces cerevisiae]
Length = 411
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -2
Query: 267 EYPRTRVEYLVRCHNLPFDSIVQ-IIFTAAIDNTHYRHFINNSDLSIFKFIKSFIETGAT 91
E+ +T ++ + R H F I +++ I++ H+ H + ++ +FIK +TG
Sbjct: 71 EFEQTFLDLMRRSHR--FSRIAATVVYNEYINDRHHVHMNSTEWATLTEFIKHLGKTGKC 128
Query: 90 RKIIRTTNGYFT*YL 46
K+ T G+F Y+
Sbjct: 129 -KVEETPKGWFITYI 142
>At2g30920.1 68415.m03769 hexaprenyldihydroxybenzoate
methyltransferase identical to
hexaprenyldihydroxybenzoate methyltransferase SP:O49354
from [Arabidopsis thaliana]
Length = 322
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 411 LDAACGTGIDSMMLVNEGXKVVSVDASDKMXK 506
+D CG G+ S L G V VDA DK K
Sbjct: 136 IDIGCGGGLLSEPLARMGATVTGVDAVDKNVK 167
>At5g37460.1 68418.m04508 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 622
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -1
Query: 355 CVL*LLS--PMNLFHVFAALPSAY*SF 281
C+L L P+ FHVF LPS Y SF
Sbjct: 147 CILWLAENEPVKAFHVFIDLPSVYKSF 173
>At5g37470.1 68418.m04509 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 629
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -1
Query: 355 CVL*LLS--PMNLFHVFAALPSAY*SF 281
C+L L P+ FHVF LPS Y SF
Sbjct: 149 CILWLAENEPVKAFHVFIDLPSLYQSF 175
>At3g50590.1 68416.m05533 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); some
similarity to s-tomosyn isoform (GI:4689231)[Rattus
norvegicus]; contains non-consensus AT-AC splice sites at
intron 18
Length = 1606
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 237 PGIPLASLGIPSEGVKDQY 293
PG P ++G+P GV+ QY
Sbjct: 1317 PGAPFQTVGLPDGGVRQQY 1335
>At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF05178:
Krr1 family
Length = 638
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 264 IPSEGVKDQYADGKAAKTWNKFIGDSNQRTQN--YKDFLI 377
+ EG D D + AK +++ GD + T+N KD+L+
Sbjct: 188 VEKEGDDDVEVDEELAKKMDEYYGDEAEATENQFLKDYLV 227
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,839,505
Number of Sequences: 28952
Number of extensions: 229213
Number of successful extensions: 706
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -