Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0806
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    25   0.49 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.49 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.0  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +2

Query: 122 PQPPVRLVSPQTLMGPQRSHFGQGIANSHRKVFIPISGPGPNGQGG 259
           P+  V+L +PQ L      H  +    S RK       P  NG+GG
Sbjct: 331 PEVCVKLANPQKLTTAAGKHLRKVGDPSKRKGTYAFRTPDENGEGG 376


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +1

Query: 367 NQVHRHPAPMPEIMKQYHPPNWKALPPAPDLKLSKVENGIVIS 495
           N    HP  +P   +   PP+  A    P LK  K+ N  V+S
Sbjct: 53  NPAFFHPGLLPLAWQANSPPSPPAPSELPALKSRKLNNNNVVS 95


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 277 IKPHPPGMQRPRTAAPNIGRAQNQIKTNKPN 369
           I+P   G  +PR A P +     Q K   P+
Sbjct: 100 IRPGVIGGSKPRVATPEVENRIEQYKRENPS 130


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 552 YAYQETSAPPSTALWKKIGDVKALPLPMACTLTHFTAGYSYY 677
           Y++++  +  S  LWKKI  V  + +  A T       ++YY
Sbjct: 30  YSFEKPDSQKS--LWKKIQGVVLVSIIAAGTAYSIYVRHTYY 69


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 552 YAYQETSAPPSTALWKKIGDVKALPLPMACTLTHFTAGYSYY 677
           Y++++  +  S  LWKKI  V  + +  A T       ++YY
Sbjct: 30  YSFEKPDSQKS--LWKKIQGVVLVSIIAAGTAYSIYVRHTYY 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,459
Number of Sequences: 336
Number of extensions: 4539
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)