Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0806
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    25   3.3  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   5.8  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   5.8  
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         24   5.8  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   5.8  

>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 325 NIGRAQNQIKTNKPNQVHRHPAPMPEIMKQYHPPN 429
           N G     +   +PN +H+ P P+ +   Q  PPN
Sbjct: 190 NAGGGPPGVTQQQPNMMHQQPPPLHQ--GQQAPPN 222


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -1

Query: 633 WAEAEPSRRQFFSTRRC*AAPTSLGKRTVDSWLFLRNYLPGIIDFP 496
           W       +QFF    C   P   G++   +  ++R YLP + +FP
Sbjct: 399 WLSCSSFFQQFF---HC-YCPVKFGRKADPNGDYIRRYLPVLKNFP 440


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 455 SGAGGSAFQLGGWYCFIISGMGAGCL 378
           SG  G  F+ GGWY   +  + A CL
Sbjct: 383 SGRSG-LFKGGGWYMLGVQSLSALCL 407


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 422 GWYCFIISGMGAGCLCT 372
           G YC IISG   G +CT
Sbjct: 179 GEYCDIISGERDGTMCT 195


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +3

Query: 549 LYAYQETSAPPS-TALWKKIGDVKA 620
           L+ ++ T+AP S T  WK+ GD KA
Sbjct: 32  LWKFESTAAPESLTETWKE-GDAKA 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 854,759
Number of Sequences: 2352
Number of extensions: 18210
Number of successful extensions: 42
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)