Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0805
         (769 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0767 - 21360999-21361157,21361185-21361274,21361413-213615...    29   3.1  
05_02_0062 + 6251192-6251803                                           29   4.1  
06_03_0616 + 22772629-22773051                                         29   5.4  
02_03_0120 + 15463163-15465250                                         28   7.1  
05_07_0188 - 28269657-28270034,28270113-28270253,28270334-282705...    28   9.4  

>07_03_0767 -
           21360999-21361157,21361185-21361274,21361413-21361563,
           21361650-21361887,21361984-21362191,21362442-21362462,
           21363884-21364011,21364108-21364245,21364820-21365654
          Length = 655

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -2

Query: 723 YSVQTAKEFFC*TLGQRLGSAPGIAEVHGRRNHSPSASAHL 601
           Y+V+ +   F    GQR+GS PG ++++     SP+ S  L
Sbjct: 172 YAVENSTRMFA--TGQRVGSDPGFSDIYSMAQCSPALSRPL 210


>05_02_0062 + 6251192-6251803
          Length = 203

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 307 VSKQENVSGAPRTRNCVRFYRGV 375
           V+K   VSG+PR+  CVR+  GV
Sbjct: 51  VAKCRRVSGSPRSPGCVRYCEGV 73


>06_03_0616 + 22772629-22773051
          Length = 140

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 611 DADGEWFRRPWTSAMPGAEPSRW 679
           D+ G W RRPW  AM      RW
Sbjct: 20  DSGGAWRRRPWGQAMLARGYGRW 42


>02_03_0120 + 15463163-15465250
          Length = 695

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 47  GGLLRASRLRIRRFETESRCTLTDDHEYSSMLTSTH 154
           G L   SR+ ++RF+    CT   D E  +ML   H
Sbjct: 407 GVLPSGSRVAVKRFQAIGSCTKAFDSELKAMLNCPH 442


>05_07_0188 -
           28269657-28270034,28270113-28270253,28270334-28270570,
           28270733-28271179,28273978-28274274
          Length = 499

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 663 APGIAEVHGRRNHSPSASAHLPTRAIKKTLNG 568
           APG  E  GR   SP A+AHLP  + ++   G
Sbjct: 67  APGHGERAGRPGTSPVAAAHLPAGSRRRPDEG 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,822,453
Number of Sequences: 37544
Number of extensions: 320932
Number of successful extensions: 652
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)