Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0804
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.47 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.82 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   1.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 135  WITYPFTWWSS 167
            W T P TWWSS
Sbjct: 1035 WTTKPSTWWSS 1045



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 407  NTKPENDLSTLKPTTTIIISTLQP 478
            N K +   +T+KPTTTI     +P
Sbjct: 2205 NDKTKPKPTTMKPTTTIGYEPQEP 2228


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 10/51 (19%)
 Frame = +2

Query: 374 TPADTSRPTEVNTKPEN-DLSTLKPT---------TTIIISTLQPSSVPIA 496
           TP+ ++ P  VN K E+  + + +PT         T+ +I+T  PS+ P+A
Sbjct: 226 TPSTSASPPTVNIKKESPQMQSYRPTGNITPHGSNTSSLITTPSPSASPLA 276


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 375 VIVLYSLHSPVMSVS*ILQVTFLQLILSHFIVV 277
           +I LY L+  V+ +S     TFLQL L H+ V+
Sbjct: 216 MIQLYYLYFDVIVIS-----TFLQLFLEHYEVI 243


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 375 VIVLYSLHSPVMSVS*ILQVTFLQLILSHFIVV 277
           +I LY L+  V+ +S     TFLQL L H+ V+
Sbjct: 142 MIQLYYLYFDVIVIS-----TFLQLFLEHYEVI 169


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 161 PPCERVSYPSPYSRPDPTTPKRV 93
           PP E  + P+P   P P++P+ +
Sbjct: 47  PPEEEAASPTPGDVPTPSSPRSI 69


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 375 VIVLYSLHSPVMSVS*ILQVTFLQLI 298
           V++LY L S +  V+ ++ VTFL+ I
Sbjct: 271 VLILYILESLLYMVTKLVVVTFLKFI 296


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 88  NMTRFGVVGSGRLY 129
           NMT+FG   S ++Y
Sbjct: 268 NMTKFGAYSSDKIY 281


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 158 PCERVSYPSPYSRPDPT 108
           P + +   +PYS P PT
Sbjct: 287 PPDHIQQATPYSAPGPT 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,533
Number of Sequences: 336
Number of extensions: 3670
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)