Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0804
         (724 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0336 + 16911947-16912144,16912636-16912692,16912917-169136...    32   0.53 
09_06_0206 - 21580240-21580467,21580544-21580591,21581533-215823...    31   0.93 
10_05_0031 + 8356046-8356361,8356439-8356648,8356735-8357043,835...    30   2.1  
04_04_0413 + 25032061-25032304,25032604-25032627,25033618-25033940     30   2.1  
08_01_1061 - 10804269-10804352,10804464-10804593,10804696-108047...    29   2.8  
01_01_0860 - 6705087-6705490,6706900-6708573,6709714-6709801           28   8.6  

>07_03_0336 +
           16911947-16912144,16912636-16912692,16912917-16913696,
           16914666-16914713,16914795-16916032,16916776-16916860,
           16917323-16917379
          Length = 820

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 431 STLKPTTTIIISTLQPSSVPIASGLEKLIPRSKNDP 538
           S LK    ++IST+ PS  PI SGL+  + R + +P
Sbjct: 192 SDLKLENILLISTIDPSKDPIRSGLKPNLERPEGNP 227


>09_06_0206 -
           21580240-21580467,21580544-21580591,21581533-21582321,
           21582779-21582979
          Length = 421

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 437 LKPTTTIIISTLQPSSVPIASGLEKLIPRS 526
           LKP   +++ST+ PS  P+ SG   ++ R+
Sbjct: 176 LKPENVLLVSTINPSKDPVRSGFTPILERT 205


>10_05_0031 +
           8356046-8356361,8356439-8356648,8356735-8357043,
           8357225-8357347,8357428-8357502,8357597-8357687,
           8357775-8357866,8357890-8358020
          Length = 448

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 21/55 (38%), Positives = 26/55 (47%)
 Frame = +3

Query: 195 DQLLAIGPDNIIEIGKHNVTYGAMIKLAQL*NATESVAETLPVIFMTPTLPESVE 359
           DQ L+I P +I+ IG    +Y     L         +A  LPVIF TP L   VE
Sbjct: 388 DQNLSICPSSILPIG----SYALWANLEMFWGCDPLLAYVLPVIFQTPDLCILVE 438


>04_04_0413 + 25032061-25032304,25032604-25032627,25033618-25033940
          Length = 196

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
 Frame = -1

Query: 382 CGRYCIVFSTLSGNVGVINIT-------GNVSATDSVAFHSCASLIIAPYVTLCL----- 239
           CGR+C+V   ++  +GV           G  S++ S +  + A+ +++P    C      
Sbjct: 13  CGRWCLVILAVASALGVSGPAFYWRYKKGFASSSSSSSVSASAAAVVSPSCPPCSCDCPP 72

Query: 238 PISIMLSGPIASN*SLPGANSGSPEL 161
           P+S+    P   N S  G     PEL
Sbjct: 73  PLSLQSIAPGLVNFSTSGCGKNDPEL 98


>08_01_1061 -
           10804269-10804352,10804464-10804593,10804696-10804745,
           10805154-10805216,10806235-10806375,10806541-10806925,
           10807735-10808339
          Length = 485

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = +3

Query: 174 PELAPGSDQLLAIGPDNIIEIGKHN----VTYGAMIKL 275
           PE +P   Q  A  PDN++E+G       +TYG+ IKL
Sbjct: 304 PEASPA--QSYAADPDNVVEVGVSTSSVPITYGSAIKL 339


>01_01_0860 - 6705087-6705490,6706900-6708573,6709714-6709801
          Length = 721

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 195 DQLLAIGPDNIIE-IGKHNVTYGAMIKL 275
           D +  +GPDN+++ I   N+ YG++ KL
Sbjct: 295 DVIREVGPDNVVQIITDRNINYGSVDKL 322


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,474,747
Number of Sequences: 37544
Number of extensions: 385545
Number of successful extensions: 1100
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)