BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0804
(724 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 32 1.8
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 32 1.8
AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein. 31 3.2
BC119717-1|AAI19718.1| 438|Homo sapiens C1orf67 protein protein. 30 7.3
BC119716-1|AAI19717.1| 438|Homo sapiens C1orf67 protein protein. 30 7.3
AL590547-1|CAH73045.1| 430|Homo sapiens chromosome 1 open readi... 30 7.3
BC043617-1|AAH43617.1| 912|Homo sapiens DNA (cytosine-5-)-methy... 30 9.6
AF480163-1|AAN40037.1| 689|Homo sapiens DNA cytosine methyltran... 30 9.6
AF331856-1|AAL57039.1| 909|Homo sapiens DNA cytosine methyltran... 30 9.6
AF067972-1|AAD33084.2| 912|Homo sapiens DNA cytosine methyltran... 30 9.6
AC012074-1|AAY14761.1| 912|Homo sapiens unknown protein. 30 9.6
AB208833-1|BAD92070.1| 811|Homo sapiens DNA cytosine methyltran... 30 9.6
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 368 TITPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPIAS 499
+ITP DTS +T+P + L T T+++ STL S P+ +
Sbjct: 355 SITPVDTSTLVTTSTEP-SSLPTTAEATSMLTSTLSEGSTPLTN 397
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 368 TITPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPIAS 499
+ITP DTS +T+P + L T T+++ STL S P+ +
Sbjct: 355 SITPVDTSTLVTTSTEP-SSLPTTAEATSMLTSTLSEGSTPLTN 397
>AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein.
Length = 513
Score = 31.5 bits (68), Expect = 3.2
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 329 YDTDITGECREYNTITPADTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSS 484
Y T ITG T+ P +S PT + +T+ PTTT+I +T +S
Sbjct: 102 YSTSITGTLSTATTLPPTSSSLPT-------TETATMTPTTTLITTTPNTTS 146
>BC119717-1|AAI19718.1| 438|Homo sapiens C1orf67 protein protein.
Length = 438
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 581 IIWAVKINSAATDQIPKFLYRDLYFSIEWIQ*FINYLNGLLED 709
+ W + + T++ FLY L+ + + Q + Y+ GL ED
Sbjct: 247 VTWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRGLCED 289
>BC119716-1|AAI19717.1| 438|Homo sapiens C1orf67 protein protein.
Length = 438
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 581 IIWAVKINSAATDQIPKFLYRDLYFSIEWIQ*FINYLNGLLED 709
+ W + + T++ FLY L+ + + Q + Y+ GL ED
Sbjct: 247 VTWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRGLCED 289
>AL590547-1|CAH73045.1| 430|Homo sapiens chromosome 1 open reading
frame 67 protein.
Length = 430
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 581 IIWAVKINSAATDQIPKFLYRDLYFSIEWIQ*FINYLNGLLED 709
+ W + + T++ FLY L+ + + Q + Y+ GL ED
Sbjct: 239 VTWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRGLCED 281
>BC043617-1|AAH43617.1| 912|Homo sapiens DNA
(cytosine-5-)-methyltransferase 3 alpha protein.
Length = 912
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = +3
Query: 87 EHDPFRGRGIGSTIWG-------WITYPFTWWSSGEPELAPGSDQLLAIG 215
E++ RG GIG +WG W +WW +G A G+ ++ G
Sbjct: 283 EYEDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTRWVMWFG 332
>AF480163-1|AAN40037.1| 689|Homo sapiens DNA cytosine
methyltransferase 3A2 protein.
Length = 689
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = +3
Query: 87 EHDPFRGRGIGSTIWG-------WITYPFTWWSSGEPELAPGSDQLLAIG 215
E++ RG GIG +WG W +WW +G A G+ ++ G
Sbjct: 60 EYEDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTRWVMWFG 109
>AF331856-1|AAL57039.1| 909|Homo sapiens DNA cytosine
methyltransferase 3 alpha protein.
Length = 909
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = +3
Query: 87 EHDPFRGRGIGSTIWG-------WITYPFTWWSSGEPELAPGSDQLLAIG 215
E++ RG GIG +WG W +WW +G A G+ ++ G
Sbjct: 280 EYEDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTRWVMWFG 329
>AF067972-1|AAD33084.2| 912|Homo sapiens DNA cytosine
methyltransferase 3 alpha protein.
Length = 912
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = +3
Query: 87 EHDPFRGRGIGSTIWG-------WITYPFTWWSSGEPELAPGSDQLLAIG 215
E++ RG GIG +WG W +WW +G A G+ ++ G
Sbjct: 283 EYEDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTRWVMWFG 332
>AC012074-1|AAY14761.1| 912|Homo sapiens unknown protein.
Length = 912
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = +3
Query: 87 EHDPFRGRGIGSTIWG-------WITYPFTWWSSGEPELAPGSDQLLAIG 215
E++ RG GIG +WG W +WW +G A G+ ++ G
Sbjct: 283 EYEDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTRWVMWFG 332
>AB208833-1|BAD92070.1| 811|Homo sapiens DNA cytosine
methyltransferase 3 alpha isoform a variant protein.
Length = 811
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = +3
Query: 87 EHDPFRGRGIGSTIWG-------WITYPFTWWSSGEPELAPGSDQLLAIG 215
E++ RG GIG +WG W +WW +G A G+ ++ G
Sbjct: 313 EYEDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTRWVMWFG 362
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,314,361
Number of Sequences: 237096
Number of extensions: 2178902
Number of successful extensions: 4865
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4858
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -