Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0803
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    27   0.16 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   6.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.1  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.1  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -1

Query: 227 PSAANVTSTRSPRDSRP*KPADIFAWKLFQHSENCSSDAMIATTRRGT 84
           P+ A+ T T S   S    PA I ++ L QH   CSS   + +T   T
Sbjct: 203 PTIASATYTNSANSSIW-SPASIDSFTLEQHRSWCSSSQPVLSTTNST 249


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 716 VFCRTRGTCFQWIYAFS 666
           VFCR R   + + YAFS
Sbjct: 112 VFCRDRVNPYLFYYAFS 128


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -2

Query: 643 EEELFDAIDGLFG 605
           +E+L+DAI+ L+G
Sbjct: 337 KEKLYDAIEALYG 349


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 215 WLPKALLQAHKLVHQYVLPIFK 280
           W P+ L+    L H  +L + K
Sbjct: 167 WYPRMLISTKLLAHFLILTVLK 188


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 215 WLPKALLQAHKLVHQYVLPIFK 280
           W P+ L+    L H  +L + K
Sbjct: 167 WYPRMLISTKLLAHFLILTVLK 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,389
Number of Sequences: 336
Number of extensions: 3379
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)