Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0803
         (761 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1036 + 9021395-9021658,9024214-9024690                           37   0.020
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328...    33   0.19 
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935...    31   1.3  
11_06_0730 - 26728241-26729335,26729998-26730660                       30   2.3  
04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072     28   7.1  
11_01_0475 - 3669734-3671452                                           28   9.3  
08_02_1304 - 26008105-26009070                                         28   9.3  

>07_01_1036 + 9021395-9021658,9024214-9024690
          Length = 246

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 265 SPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQ 438
           SP F+ M +  M  ++  I+ + DVS+  LR  + +MY  E  + ++  +  +  AE+ +
Sbjct: 92  SPVFRAMLENEMEESRSGIIKIYDVSYDVLRAFVHYMYTAEALLDEQMASDLLVLAEKYE 151

Query: 439 VKGL 450
           VK L
Sbjct: 152 VKNL 155


>05_03_0604 -
           16132173-16132391,16132488-16132556,16132824-16132898,
           16132981-16133113,16133188-16133297,16133360-16133407,
           16133657-16133983,16135006-16135233,16135360-16135689,
           16135780-16136586
          Length = 781

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 256 SVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 405
           S+ S  F +MF   M  +    VF +DV   A   L+QFMY GE+ V  EE+
Sbjct: 371 SLWSMTFDKMFTNGMKESSASNVFFEDVPVEAFFLLIQFMYSGELKVDIEEI 422


>07_03_1529 +
           27491963-27492465,27493045-27493154,27493384-27493510,
           27494082-27494430,27494975-27495251,27496236-27496333,
           27498090-27498214,27498270-27498326,27498328-27498370,
           27498581-27498667,27498802-27498882,27499735-27499901,
           27499987-27500098,27500188-27500390,27500473-27500607,
           27501106-27501205
          Length = 857

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
 Frame = +1

Query: 154 ANMSAGFHGLLSRGDLVDVTLAAEGSI-AST*ISSSVCSPYFQ-EMF-KMNPTQHPIVFL 324
           +NMS     LL+ G   D+T   +G +  +  +  +  SP F+ ++F  M       + +
Sbjct: 295 SNMSQHIGQLLTDGKRTDITFEVDGEVFPAHKVVLAARSPVFRAQLFGPMKDKNMKRITI 354

Query: 325 KDVSHSALRDLLQFMYQGEV 384
           +D+  S  + LL FMY  E+
Sbjct: 355 EDMEASVFKALLHFMYWDEL 374


>11_06_0730 - 26728241-26729335,26729998-26730660
          Length = 585

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 27/84 (32%), Positives = 37/84 (44%)
 Frame = -2

Query: 706 EPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLESRSVSNLVITDCLC 527
           EP+G +S    H   A   C+   +   I  L  L  A G+   L SRS + L I+   C
Sbjct: 106 EPQGSSSKWHPHIDDAIHACKTSWIGRCITTL--LEWAQGLYRSLRSRSAALLPISCSRC 163

Query: 526 CDDLGPASKSALVWMAWNFLHFDY 455
           C   G AS S L  ++     FD+
Sbjct: 164 C---GSASDSLLERLSCLSRQFDF 184


>04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072
          Length = 414

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 262 CSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN-VKQEEL 405
           C P  +  F    T++P+VFL+ +  +   DLLQ  +   V+  K+ EL
Sbjct: 253 CEPRKEIFFTERNTENPLVFLRFLVSTPWGDLLQIKFSRRVHRTKRLEL 301


>11_01_0475 - 3669734-3671452
          Length = 572

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 688 SSGSTHFRFAGPLCEEEELFDAID 617
           SSG+ HFR +G +   +E+F A++
Sbjct: 486 SSGAKHFRVSGSVASPDEIFAALE 509


>08_02_1304 - 26008105-26009070
          Length = 321

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +1

Query: 265 SPYFQE--MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQ 438
           SP F+   +  M     P V L+D+  +  R LL F+Y    +V Q E +S  ST + LQ
Sbjct: 176 SPVFRAELLGSMAEATMPCVTLRDIEPATFRALLHFVY---TDVLQIEGSSSTSTTDLLQ 232


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,960,619
Number of Sequences: 37544
Number of extensions: 362679
Number of successful extensions: 945
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)