Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0803
(761 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0) 50 3e-06
SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0) 44 1e-04
SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 41 0.001
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 40 0.002
SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) 39 0.005
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 37 0.016
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 37 0.016
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 35 0.063
SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42) 31 0.77
SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 0.77
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 1.0
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 31 1.4
SB_34102| Best HMM Match : Kelch_1 (HMM E-Value=0) 30 2.4
SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0) 30 2.4
SB_47975| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 29 5.5
SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6) 28 7.2
SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 28 9.5
SB_54174| Best HMM Match : EGF (HMM E-Value=0.21) 28 9.5
SB_42347| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_35972| Best HMM Match : DUF1379 (HMM E-Value=5.5) 28 9.5
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 9.5
SB_14297| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5) 28 9.5
SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 9.5
SB_54171| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_48899| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_36000| Best HMM Match : DUF1379 (HMM E-Value=4.8) 28 9.5
SB_32624| Best HMM Match : rve (HMM E-Value=0.00042) 28 9.5
SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18) 28 9.5
SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068) 28 9.5
>SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 645
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +1
Query: 169 GFHGLLSRGDLVDVTLAAEG-SIAST*ISSSVCSPYFQEMFKMN--PTQHPIVFLKDVSH 339
G + L R +L DV L I++ + S CS YF MF N ++ ++++K +
Sbjct: 21 GLNQLRQRKELCDVELCVGNVQISAHRVVLSACSAYFDAMFTGNLLESKKQVIYIKGIDE 80
Query: 340 SALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 441
+AL+ L+ F Y G+ + QE + + A LQ+
Sbjct: 81 TALQLLVDFAYTGKAEITQENVQLLLPAANMLQL 114
>SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 651
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Frame = +1
Query: 109 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAA-EGSIAST*ISSSVCSPYFQEM 285
MAS++ C +F + + + L S L DVTL + S+ S + + SPYF M
Sbjct: 1 MASEDGLLFCVPDFPTKVFSSLNELRSEEKLCDVTLVVKDRSLVSHRVVLAGWSPYFHAM 60
Query: 286 F--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 450
M ++ V + + +AL +L+ F Y G + E + S + + LQ+ +
Sbjct: 61 LTGDMLESRLEKVTIHGIECAALEELINFCYTGRTEIHVENVQSLMCASSLLQLSNV 117
>SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 199 LVDVTLAA-EGSIAST*ISSSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFM 369
L DV L E S A + CS YF MF ++ ++ I+ +KD+ ++ L++F
Sbjct: 11 LCDVVLRIDEQSYAGHRAVLASCSAYFYAMFNGELAESKQKIITMKDILPDYMQVLVEFA 70
Query: 370 YQGEVNVKQEELASFISTAEQLQ 438
Y G V + E + + ++TA LQ
Sbjct: 71 YTGRVEITVENVQNLLATASLLQ 93
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +1
Query: 196 DLVDVTLAAEGS-IAST*ISSSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQF 366
+L DV + S I + + + CSPYF+ MF +M ++ + ++DV SA+ L+ F
Sbjct: 57 ELCDVVIKVGSSTIHAHRVVLAACSPYFRAMFTREMAESRQAEITIRDVDESAMNLLITF 116
Query: 367 MYQGEVNVKQEELASFISTAEQLQV 441
Y + +++ + + + A LQ+
Sbjct: 117 AYTASITIEETNVQTLLPAACLLQL 141
>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 587
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +1
Query: 199 LVDVTLAAEGS-IAST*ISSSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFM 369
L DVTL EG + I + S YF +F +M P V L+++ S + +L ++
Sbjct: 29 LCDVTLVVEGKEFPAHRIVLAASSKYFYGLFTSEMIEKNAPSVKLQELRASVMNHILTYL 88
Query: 370 YQGEVNVKQEELASFISTAEQLQVKGLTG 456
Y GE+ V + I++A L + L G
Sbjct: 89 YTGEITVTELNAEDLIASANYLLIPRLKG 117
>SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)
Length = 518
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +1
Query: 172 FHGLLSRGDLVDVTLAAEG-SIAST*ISSSVCSPYFQEMFKMN--PTQHPIVFLKDVSHS 342
F L G+L+DVTL +G I + + + CSPYF+ M T + L +
Sbjct: 29 FKELRDDGELLDVTLHVQGEEIKAHRVVLAACSPYFRAMLTTGFAETFMSTIPLHECDPV 88
Query: 343 ALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 450
++ ++++ Y + + +E + +S A ++ +
Sbjct: 89 GVQSIVEYFYSKRLTITKENIEGLLSAASLFEIPSI 124
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Frame = +1
Query: 172 FHGLLSRGDLVDVTLAAEGS-IAST*ISSSVCSPYFQEMFKMNP---TQHPIVFLKDVSH 339
F+ + +L DV L + I S + + SPYF+ MF N TQ I L D+
Sbjct: 23 FNDFRNSKELCDVLLCVDDEEIPSHKLVLAASSPYFRAMFTSNLLECTQRTIT-LYDIDV 81
Query: 340 SALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 441
AL+ ++++ Y G++ + ++ + + + LQV
Sbjct: 82 GALQQIVEYFYTGKITIDEDNVQFLLHASCLLQV 115
>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 481
Score = 37.1 bits (82), Expect = 0.016
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +1
Query: 181 LLSRGDLVDVTLAA-EGSIAST*ISSSVCSPYFQEMFKMNPTQ--HPIVFLKDVSHSALR 351
L R L DVTL E I + + + S YFQ MF + V L+DV A+
Sbjct: 40 LRGRKQLCDVTLCVGERQIVAHRLVLASFSSYFQAMFTGGLVESFEDSVTLRDVDSGAVE 99
Query: 352 DLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 450
L+ F Y G++++ E + S + + Q+ +
Sbjct: 100 LLVDFAYTGKLDITTENVQSIMYASSLFQLNAI 132
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 256 SVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAE 429
S SPYF+ +F + + V ++ + LL F+Y G +NV +E + + A+
Sbjct: 53 SASSPYFEVLFSGGLRESYLDTVTIQGIDSETFSALLDFIYTGVINVNEENVQQLLPAAK 112
Query: 430 QLQV 441
LQ+
Sbjct: 113 MLQL 116
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 35.1 bits (77), Expect = 0.063
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Frame = +1
Query: 118 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGS--IAST*ISSSVCSPYFQEMFK 291
D+ F+ + + + + L G + DV + AE + +A I S+ S YF MF
Sbjct: 6 DDSFTFYDDKYSKAILHRINQLRHHGAMCDVVIKAEDTEFLAHRNILSA-SSDYFFAMFN 64
Query: 292 --MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 450
M + +V + V+ ++R +L F+Y GE+ + + + + A + V+ +
Sbjct: 65 GNMKESSQDVVTITGVTPDSMRSILNFIYTGEIVLDWDNVELILQGANLMLVQSV 119
>SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42)
Length = 603
Score = 31.5 bits (68), Expect = 0.77
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 205 DVTLAAEGSI-AST*ISSSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQ 375
DV L EG + A+ + S +F MF M + + L ++ AL +L F Y
Sbjct: 53 DVNLEVEGQVFAAHRCVLAANSQFFYTMFTSGMRDSNDSRIKLCSLTSGALSSILDFFYT 112
Query: 376 GEVNVKQEELASFISTAEQL 435
E+N+ ++ + + A L
Sbjct: 113 REINISRDNVVDILEAASFL 132
>SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 265 SPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 435
SPYF+ +F +M Q + L +V + D+L ++Y G V V++ + A+ +
Sbjct: 48 SPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYLYSGSVVVEESKAIPLTVAADYM 106
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 199 LVDVTLAAEG-SIAST*ISSSVCSPYFQEMFKMN-PTQHPIVFLKDVSHSALRDLLQFMY 372
L DV L +G + + S YF MF + T V +++++ +A+ LL F+Y
Sbjct: 33 LTDVVLIVDGHEFPAHKNILAASSDYFMAMFSGHMATVDRTVVVQEITSTAMEVLLAFIY 92
Query: 373 QGEVNVKQEEL 405
QG++ + +E +
Sbjct: 93 QGKLLITEENV 103
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 265 SPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 396
SPYF+ +F +M Q + L +V + D+L ++Y G V V++
Sbjct: 1417 SPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYLYSGSVVVEE 1462
>SB_34102| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 628
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/53 (20%), Positives = 30/53 (56%)
Frame = +1
Query: 292 MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 450
M+ ++ V L+++ A+++++ F Y G++ + + + + A LQV+ +
Sbjct: 66 MSESRQDTVTLQELDEKAMQNMIDFFYSGKIEISELNVQEVLPIACLLQVQSV 118
>SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 265 SPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 435
S +F +F M Q V LK + + DLL ++Y G++ V + F++ A+ L
Sbjct: 43 SIFFNGLFSSSMRERQENTVNLKQFPVNIMEDLLTYLYTGKLEVTEATAQDFLAAADFL 101
>SB_47975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 679 IHWKQVPLVLQKTNL*RYQTK 741
+H++ +P V+QKTNL RY K
Sbjct: 24 VHFRSMPRVVQKTNLTRYNLK 44
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 761 SDSIVLIFVWYRHKFV--FCRTRGTCFQWIYAFSFR 660
+D + L+FV ++ F+ F G CF + +AF+FR
Sbjct: 641 ADLLTLLFVSPQYVFIHTFVHPIGECFSFFFAFAFR 676
>SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6)
Length = 249
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 619 Q*HQITLLPHKVDQRNENA*IHWKQVPLVLQKTNL*RYQTKMR 747
Q H+I+L HK R + + PL KT L +Y+T +R
Sbjct: 103 QQHKISLQQHKTRLRQHKTPLRQHKTPLRQHKTPLRQYKTPLR 145
>SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 1163
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 660 AKRKCVDPLEAGPSGSAKDEFVTIPDE 740
A+ K D + P+GS E +T+PD+
Sbjct: 745 ARHKAADAISRHPTGSTTPEMMTLPDD 771
>SB_54174| Best HMM Match : EGF (HMM E-Value=0.21)
Length = 658
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 153 RKYVSGLSWPAVAWRSRRRNVGCRRLYCKHIN*FISMFSLF-SRNVQNESNTTSDSIF 323
R Y L+ + RRN+ CRR + I +F + R + ++S TT S+F
Sbjct: 405 RSYEGSLTLANLPTLHERRNIACRR-FVSRIKPQNPLFPIIKGRRITHDSGTTIKSVF 461
>SB_42347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 242 VLAIEP-SAANVTSTRSPRDSRP*KPADIFAWKLFQHSENCSSDAMIATTRR 90
+LA+ P +A N T R P+D P A +F FQ+S ++ ++ R
Sbjct: 25 LLALHPRTAVNRTELREPQDPSPTSAAAMFHSSKFQYSIKSTNGKILTDLER 76
>SB_35972| Best HMM Match : DUF1379 (HMM E-Value=5.5)
Length = 325
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 660 AKRKCVDPLEAGPSGSAKDEFVTIPDE 740
A+ K D + P+GS E +T+PD+
Sbjct: 234 ARHKAADAISRHPTGSTTPEMMTLPDD 260
>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1229
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 660 AKRKCVDPLEAGPSGSAKDEFVTIPDE 740
A+ K D + P+GS E +T+PD+
Sbjct: 679 ARHKAADAISRHPTGSTTPEMMTLPDD 705
>SB_14297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 269 GEHTDELIYVLAIEPSAANVTSTRSPRD 186
G+HTD I++ I+P + T +SP D
Sbjct: 66 GDHTDYTIFIKKIQPDKSPHTIQKSPTD 93
>SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5)
Length = 398
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 660 AKRKCVDPLEAGPSGSAKDEFVTIPDE 740
A+ K D + P+GS E +T+PD+
Sbjct: 172 ARHKAADAISRHPTGSTTPEMMTLPDD 198
>SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1013
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 660 AKRKCVDPLEAGPSGSAKDEFVTIPDE 740
A+ K D + P+GS E +T+PD+
Sbjct: 93 ARHKAADAISRHPTGSTTPEMMTLPDD 119
>SB_54171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 660 AKRKCVDPLEAGPSGSAKDEFVTIPDE 740
A+ K D + P+GS E +T+PD+
Sbjct: 51 ARHKAADAISRHPTGSTTPEMMTLPDD 77
>SB_48899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 660 AKRKCVDPLEAGPSGSAKDEFVTIPDE 740
A+ K D + P+GS E +T+PD+
Sbjct: 209 ARHKAADAISRHPTGSTTPEMMTLPDD 235
>SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 109 MASDEQFSLCWNNFHANMSAGFHGL 183
M S E WN F N++AG+H L
Sbjct: 203 MMSYEGMQFDWNTFSVNLTAGYHQL 227
>SB_36000| Best HMM Match : DUF1379 (HMM E-Value=4.8)
Length = 420
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 660 AKRKCVDPLEAGPSGSAKDEFVTIPDE 740
A+ K D + P+GS E +T+PD+
Sbjct: 272 ARHKAADAISRHPTGSTTPEMMTLPDD 298
>SB_32624| Best HMM Match : rve (HMM E-Value=0.00042)
Length = 415
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 660 AKRKCVDPLEAGPSGSAKDEFVTIPDE 740
A+ K D + P+GS E +T+PD+
Sbjct: 93 ARHKAADAISRHPTGSTTPEMMTLPDD 119
>SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18)
Length = 838
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 660 AKRKCVDPLEAGPSGSAKDEFVTIPDE 740
A+ K D + P+GS E +T+PD+
Sbjct: 286 ARHKAADAISRHPTGSTTPEMMTLPDD 312
>SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068)
Length = 1502
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 660 AKRKCVDPLEAGPSGSAKDEFVTIPDE 740
A+ K D + P+GS E +T+PD+
Sbjct: 999 ARHKAADAISRHPTGSTTPEMMTLPDD 1025
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,138,582
Number of Sequences: 59808
Number of extensions: 422609
Number of successful extensions: 1137
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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