Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0803
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    38   0.008
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    36   0.031
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    32   0.51 
AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical ...    32   0.51 
Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      30   2.1  
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      30   2.1  
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    30   2.1  
L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical pr...    29   4.8  
U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z83129-10|CAM84807.1|  262|Caenorhabditis elegans Hypothetical p...    28   8.3  

>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
 Frame = +1

Query: 178 GLLSRGDLVDVTLAAEGS-IAST*ISSSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSAL 348
           GL +R  L DVTL      I +  +  S CSPYF  MF  +M       + ++++    L
Sbjct: 48  GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTL 107

Query: 349 RDLLQFMYQGEVNVKQEELASFISTAEQLQV 441
             L++F Y G + +    +   +  A  LQ+
Sbjct: 108 EALIEFCYTGAIAIDDSNVQDILPAACLLQI 138


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 35.9 bits (79), Expect = 0.031
 Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
 Frame = +1

Query: 172 FHGLLSRGDLVDVTLAAEG-SIAST*ISSSVCSPYFQEMFKMNPTQHPI--VFLKDVSHS 342
           F+ L S+  L DV L  E   +++  +  +   PYF+ MF ++  +  +  + ++D+++ 
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYE 100

Query: 343 ALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 441
            +  LL F Y GE+ +    + S +  A   Q+
Sbjct: 101 TVDALLSFAYTGELRITTSNVQSIMLGANFFQM 133


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
 Frame = +1

Query: 172 FHGLLSRGDLVDVTLAAEG-SIAST*ISSSVCSPYFQEMFKMNPTQHPIVFLK----DVS 336
           F+ L S+  L DV L  E   +++  +  +   PYF+ MF ++  +  +  +     D++
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMN 100

Query: 337 HSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 441
           +  +  LL F Y GE+ +    + S +  A   Q+
Sbjct: 101 YETVDALLSFAYTGELRITTSNVQSIMLGANFFQM 135


>AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical
           protein Y75B12B.4 protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
 Frame = +1

Query: 199 LVDVTLAAEGS---IAST*ISSSVCSPYFQEMFKMNPTQHPIVFLK--DVSHSALRDLLQ 363
           L DV L  EG    +    +++S  S +FQ+MF  N  +     +K  DV+HS   DLL 
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATS--SQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLN 216

Query: 364 FMYQGEVNVKQEELASFISTAEQLQV 441
            +Y   + +    ++  +  +++  V
Sbjct: 217 VIYPTHMLINSSNVSHLLKLSDRFAV 242


>Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical
           protein F27C8.5 protein.
          Length = 565

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = +1

Query: 265 SPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 441
           S  F E F      +    + D    ++R +  +MY GE+++ +  +A  ++ A  L+V
Sbjct: 57  SDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGEIDIPETTIADVLAVASYLRV 115


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 8/122 (6%)
 Frame = +1

Query: 100 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEG-SIAST*ISS 255
           + ++AS E   LC   F  +     H L  R       G   DV +  +  S A+     
Sbjct: 1   MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60

Query: 256 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 435
           +  SPYF  +FK        + +   S       L +MY G V + +  ++  +  A   
Sbjct: 61  AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNF 120

Query: 436 QV 441
            +
Sbjct: 121 LI 122


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 8/122 (6%)
 Frame = +1

Query: 100 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEG-SIAST*ISS 255
           + ++AS E   LC   F  +     H L  R       G   DV +  +  S A+     
Sbjct: 1   MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60

Query: 256 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 435
           +  SPYF  +FK        + +   S       L +MY G V + +  ++  +  A   
Sbjct: 61  AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNF 120

Query: 436 QV 441
            +
Sbjct: 121 LI 122


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 8/122 (6%)
 Frame = +1

Query: 100 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEG-SIAST*ISS 255
           + ++AS E   LC   F  +     H L  R       G   DV +  +  S A+     
Sbjct: 1   MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60

Query: 256 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 435
           +  SPYF  +FK        + +   S       L +MY G V + +  ++  +  A   
Sbjct: 61  AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNF 120

Query: 436 QV 441
            +
Sbjct: 121 LI 122


>L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical
           protein C50C3.8 protein.
          Length = 410

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
 Frame = +1

Query: 265 SPYFQEMFK---MNPTQHPIVFLKDVSHSALRDLLQFMYQG--EVNVKQEELASFISTAE 429
           SP F+ MF    M   Q   + ++D  + ++R +++FMY G  E    Q  +   ++ A+
Sbjct: 241 SPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMYTGATESLESQGNIDEILAIAD 300

Query: 430 QLQV 441
           + +V
Sbjct: 301 KYEV 304


>U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical
           protein T07F8.1 protein.
          Length = 822

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 376 GEVNVKQEELASFISTAEQLQVKGLTGNQ 462
           G    K EE+  +I  ++++  +GLTGNQ
Sbjct: 650 GPTKQKLEEVLDYIGCSQKINYQGLTGNQ 678


>Z83129-10|CAM84807.1|  262|Caenorhabditis elegans Hypothetical
           protein W06G6.15 protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 540 QIVFVVTTWGLPRSRLWFGWRGTFFILI 457
           QI  VV +WGL    LW  W    F+L+
Sbjct: 89  QIGGVVRSWGLNAIELWIVWVWVVFVLL 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,653,026
Number of Sequences: 27780
Number of extensions: 324985
Number of successful extensions: 776
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)