Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0803
         (761 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.     114   1e-27
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.         100   1e-23
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   8e-05
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              25   0.58 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   1.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   7.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.4  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score =  114 bits (274), Expect = 1e-27
 Identities = 53/116 (45%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
 Frame = +1

Query: 109 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEG-SIAST*ISSSVCSPYFQEM 285
           M   + F L WNN+ +++++ F  L    D VDVTLA +G S+ +  +  S CSPYF+E+
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 286 FKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLT 453
            K  P +HP++ L+DV+ S L  L++F+Y GEVNV Q  L+SF+ TAE L+V GLT
Sbjct: 61  LKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAEVLRVSGLT 116


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score =  100 bits (240), Expect = 1e-23
 Identities = 47/112 (41%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
 Frame = +1

Query: 121 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAA-EGSIAST*ISSSVCSPYFQEMFKMN 297
           + + L WNN+ +NM++ FH LL     VDVTLA  E S+ +  +  S CS YFQ++   N
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSN 68

Query: 298 PTQHPIVFL-KDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 450
           P +HP + + +DV  + L+ +++F+Y+GE++V Q EL S + TA+QL++KGL
Sbjct: 69  PCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGL 120


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 38.3 bits (85), Expect = 8e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 109 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 225
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 355 LLQFMYQGEVNVKQEELASFIS-TAEQLQVKGLTGNQNEE 471
           ++  +Y G VNV+ E + S++    ++  V    GN NE+
Sbjct: 43  IIDEVYNGNVNVEDENVQSYVECMMKKFNVVDENGNFNEK 82


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = -2

Query: 535 CLCCDDL-GPASKSA 494
           C CCD+L GP S SA
Sbjct: 13  CWCCDNLGGPGSSSA 27


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 473 LSSF*LPVKPLT*SCSAVLINDANSSCLTLTSP 375
           LSS      P+T + S ++ N  NS+C    SP
Sbjct: 323 LSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSP 355


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 85  VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTL 216
           V R +VA++ +   F +CW  FHA      +   S+    DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 86  FHVESSLSWRRTNNFHY 136
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -2

Query: 745 SSSSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGL 611
           SSS    + SSF     P S GS ++     L   ++L D I+ L
Sbjct: 88  SSSPSPSSPSSFFSSVSPTSLGSENYTGISDLFVFDDLNDYINRL 132


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 199 LVDVTLAAEGSIAST*ISSSVCSPYFQEMFKMNPTQHPI 315
           LVDV  +A  S  ST  S      Y  E+F    T+  +
Sbjct: 129 LVDVVKSANWSYVSTVYSEGSYGEYGIEVFTREATERNV 167


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 199 LVDVTLAAEGSIAST*ISSSVCSPYFQEMFKMNPTQHPI 315
           LVDV  +A  S  ST  S      Y  E+F    T+  +
Sbjct: 219 LVDVVKSANWSYVSTVYSEGSYGEYGIEVFTREATERNV 257


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,382
Number of Sequences: 438
Number of extensions: 3810
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)