Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0802
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.86 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -3

Query: 466 EYHSFSHSNDKLLVPKYVLS 407
           ++H+ S  ND ++ PK++LS
Sbjct: 577 DFHNMSFENDFIIQPKHLLS 596


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = +2

Query: 62  RLPIPDLQKTGDRYLRALKPLLTNSLYDDAQQRTLKFVNGEGLEIQEKLISKDKMNKNTS 241
           RL + D+ +  DR   A+   +     D+ Q   +     EG+++   +I    ++ N +
Sbjct: 302 RLSLDDMDRWRDRIYDAIHSGVVRG--DNGQN--IPLTEFEGIDVLGNIIESSILSPNRN 357

Query: 242 YISDF 256
           Y  DF
Sbjct: 358 YYGDF 362


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 525 LFKAFPL-DMSQFVGLFGATRLPQIG 599
           L+K + +  +S+F+ LFG    P IG
Sbjct: 145 LYKLWKMPSLSEFLSLFGTETCPAIG 170


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 525 LFKAFPL-DMSQFVGLFGATRLPQIG 599
           L+K + +  +S+F+ LFG    P IG
Sbjct: 145 LYKLWKMPSLSEFLSLFGTETCPAIG 170


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 152 VHHHIKSLLGVVSRPA 105
           VHHH  SLLG V   A
Sbjct: 134 VHHHQTSLLGKVEGAA 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,303
Number of Sequences: 336
Number of extensions: 3452
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)