Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0802
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    26   0.33 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.4  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
            ORF for hypotheticalprotein. ).
          Length = 998

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 152  QQRTLKFVNGEGLEIQEKLISKDKMNKN 235
            +QR L FV G+G  +   L+SKD ++ N
Sbjct: 955  EQRGLVFVKGKGQLLTHYLVSKDGVSLN 982


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 179 RLQISKYVVVHHHIKSLLGVVSRPAN 102
           RLQ+ +YV V+  + S L + S   N
Sbjct: 439 RLQVGQYVTVNGDVVSHLNISSTHTN 464


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 621 PKSKHVLVQRRGRFYAFD 674
           PK KHV V R  R Y F+
Sbjct: 379 PKEKHVEVARLIRNYYFE 396


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 621 PKSKHVLVQRRGRFYAFD 674
           PK KHV V R  R Y F+
Sbjct: 379 PKEKHVEVARLIRNYYFE 396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,068
Number of Sequences: 438
Number of extensions: 4295
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)