Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0802
         (753 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19020.1 68417.m02803 chromomethylase 2 (CMT2) nearly identic...    31   1.1  
At4g19860.1 68417.m02910 lecithin:cholesterol acyltransferase fa...    28   7.7  

>At4g19020.1 68417.m02803 chromomethylase 2 (CMT2) nearly identical to
            chromomethylase CMT2 [Arabidopsis thaliana] GI:14583094
          Length = 1295

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 23   SKVPTMHFQKSLPRLPIPDLQKTG-DRYLRALKPLLTNSLYDDAQQRTLKFVNGEGLEIQ 199
            S +P +   +   +LP   L KT   RY+R+ K  LT S  D+  +RT+   +     I 
Sbjct: 1061 SDLPHVSNDEDREKLPYESLPKTDFQRYIRSTKRDLTGSAIDNCNKRTMLLHDHRPFHIN 1120

Query: 200  E 202
            E
Sbjct: 1121 E 1121


>At4g19860.1 68417.m02910 lecithin:cholesterol acyltransferase
           family protein / LACT family protein similar to
           lysosomal phospholipase A2 [Mus musculus] GI:18699602;
           contains Pfam profile PF02450: Lecithin:cholesterol
           acyltransferase (phosphatidylcholine-sterol
           acyltransferase)
          Length = 535

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 588 PQIGKDKLFRDPKSKHVLVQRRGRFYAFDVLDKD 689
           P  GK  +  DPK+  V+ Q R   +A DVLD D
Sbjct: 79  PSTGKT-ISLDPKTSIVVPQDRAGLHAIDVLDPD 111


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,894,879
Number of Sequences: 28952
Number of extensions: 295891
Number of successful extensions: 672
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)